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2
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0
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7.2k
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Comment: C: How to do data cleaning for VCF genetic file
5.4 years ago by Vitis ★ 2.6k
4
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1
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2.5k
views
Answer: A: trouble with bedtools intersect and coverage
5.4 years ago by Vitis ★ 2.6k
1
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0
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2.0k
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Comment: C: JBrowse help with opening a Gff gene model file
5.4 years ago by Vitis ★ 2.6k
1
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1
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2.0k
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Comment: C: JBrowse help with opening a Gff gene model file
5.4 years ago by Vitis ★ 2.6k
0
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0
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1.9k
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Comment: C: Insert size distribution for BWA
5.4 years ago by Vitis ★ 2.6k
0
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0
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745
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Aligner for large indels (up to 200bp out of 500bp reads)
alignment
5.4 years ago by Vitis ★ 2.6k
1
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0
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2.1k
views
Comment: C: Extract reads matching variants from VCF file
5.5 years ago by Vitis ★ 2.6k
0
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0
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1.6k
views
Answer: A: SNP calling with de novo assembly
5.5 years ago by Vitis ★ 2.6k
0
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0
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1.1k
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Comment: C: Visualizing Orthologs and Paralogs genes
5.5 years ago by Vitis ★ 2.6k
0
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0
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2.0k
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Answer: A: Improve illumina short read assembly using PacBio long reads
5.5 years ago by Vitis ★ 2.6k
0
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1
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7.1k
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Comment: C: GATK genomicsDBimport intervals for WGS
5.5 years ago by Vitis ★ 2.6k
3
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1
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2.2k
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Answer: A: Haplotype frequency calculation from .vcf files
5.5 years ago by Vitis ★ 2.6k
1
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1
reply
2.4k
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Answer: A: hom/het definition from Allelic Depth counts
5.5 years ago by Vitis ★ 2.6k
2
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0
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1.8k
views
Comment: C: 10 Most important topic in Human evolutionary genomics
5.6 years ago by Vitis ★ 2.6k
2
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1
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7.1k
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Comment: C: GATK genomicsDBimport intervals for WGS
5.6 years ago by Vitis ★ 2.6k
1
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0
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2.0k
views
Comment: C: BEDOPS bedmap behavior
5.6 years ago by Vitis ★ 2.6k
4
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2
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2.0k
views
BEDOPS bedmap behavior
genome
updated 5.7 years ago by 35k • written 5.7 years ago by ★ 2.6k
0
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0
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642
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Comment: C: If genome varies across cells, how much trust should we put in our SNPs since DN
5.7 years ago by Vitis ★ 2.6k
2
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1
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3.2k
views
Assembly and consensus tools for Nanopore reads from amplicons
Assembly
5.7 years ago by Vitis ★ 2.6k
2
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0
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3.2k
views
Answer: A: Assembly and consensus tools for Nanopore reads from amplicons
5.7 years ago by Vitis ★ 2.6k
1
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0
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1.4k
views
Comment: C: Oxford Nanopore insertion vs deletion rates
5.7 years ago by Vitis ★ 2.6k
1
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1
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4.6k
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Comment: C: Pysam.view report 'pysam.utils.SamtoolsError: "samtools returned with error 1: s
5.7 years ago by Vitis ★ 2.6k
0
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0
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944
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Comment: C: the error occurred when i extracted unique mapped read by samtools and assembled
5.7 years ago by Vitis ★ 2.6k
1
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1
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4.6k
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Comment: C: Pysam.view report 'pysam.utils.SamtoolsError: "samtools returned with error 1: s
5.7 years ago by Vitis ★ 2.6k
0
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0
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1.4k
views
Answer: A: Program for Amplicon (MHC) Analysis?
5.7 years ago by Vitis ★ 2.6k
1
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1
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4.6k
views
Comment: C: Pysam.view report 'pysam.utils.SamtoolsError: "samtools returned with error 1: s
5.7 years ago by Vitis ★ 2.6k
0
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0
replies
2.0k
views
Comment: C: Run Delly by chromosome
5.7 years ago by Vitis ★ 2.6k
0
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0
replies
16k
views
Answer: A: How To Generate A "Lollipop" Image To Display Mutations Along A Sequence
5.7 years ago by Vitis ★ 2.6k
0
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0
replies
1.2k
views
Comment: C: Compara API of Ensembl
5.7 years ago by Vitis ★ 2.6k
0
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0
replies
2.9k
views
Comment: C: Duplicates in plink files (same position, same ref allele but different A1 allel
5.7 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.2k
views
Answer: A: Compara API of Ensembl
5.7 years ago by Vitis ★ 2.6k
1
vote
1
reply
4.6k
views
Comment: C: Pysam.view report 'pysam.utils.SamtoolsError: "samtools returned with error 1: s
5.7 years ago by Vitis ★ 2.6k
1
vote
1
reply
2.0k
views
Comment: C: Run Delly by chromosome
5.7 years ago by Vitis ★ 2.6k
1
vote
1
reply
968
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Comment: C: Determination of haplotypes based on genotype data of 2 SNPs
5.7 years ago by Vitis ★ 2.6k
0
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0
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1.3k
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Comment: C: GATK recalibrator aborted/ended without any summery report
5.7 years ago by Vitis ★ 2.6k
1
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0
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1.4k
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Comment: C: Obtain sequence of a gene with vector DNA integrated
5.7 years ago by Vitis ★ 2.6k
0
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1
reply
1.4k
views
Comment: C: Obtain sequence of a gene with vector DNA integrated
5.7 years ago by Vitis ★ 2.6k
0
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1
reply
1.4k
views
Comment: C: Obtain sequence of a gene with vector DNA integrated
5.7 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.4k
views
Answer: A: Obtain sequence of a gene with vector DNA integrated
5.7 years ago by Vitis ★ 2.6k
1
vote
1
reply
1.5k
views
Answer: A: How to evaluate one specie lost or gain the chloroplast in the evolutionary proc
5.7 years ago by Vitis ★ 2.6k
1
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0
replies
9.3k
views
Answer: A: Calculate population allele frequencies from a vcf file including multiple popul
5.7 years ago by Vitis ★ 2.6k
0
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1
reply
2.4k
views
Comment: C: JBrowse, VCF-based Variant Track, "Error incorrect header check"
5.7 years ago by Vitis ★ 2.6k
0
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2
replies
2.4k
views
Comment: C: JBrowse, VCF-based Variant Track, "Error incorrect header check"
5.7 years ago by Vitis ★ 2.6k
0
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1
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2.4k
views
Comment: C: JBrowse, VCF-based Variant Track, "Error incorrect header check"
5.7 years ago by Vitis ★ 2.6k
1
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0
replies
1.6k
views
Answer: A: data assembling and analysis for polyploid plant
5.8 years ago by Vitis ★ 2.6k
0
votes
0
replies
1.4k
views
Comment: C: IGB Visualization for Depth Graph
5.8 years ago by Vitis ★ 2.6k
2
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0
replies
5.3k
views
Comment: C: How to distinguish if a gene is a paralogue or an isoform?
5.8 years ago by Vitis ★ 2.6k
0
votes
0
replies
1.7k
views
Answer: A: Algorithms for identification of insertion sites using split reads
5.8 years ago by Vitis ★ 2.6k
1
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0
replies
2.0k
views
Answer: A: Annovar annotation for plants
5.8 years ago by Vitis ★ 2.6k
1
vote
0
replies
6.0k
views
Comment: C: Identification of the sequence insertion site in the genome
5.8 years ago by Vitis ★ 2.6k
339 results • Page 2 of 7
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