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2
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Answer: A: How To Get Gene Regions +3Kb Upstream
updated 5.9 years ago by 44k • written 12.2 years ago by 5.2k
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Comment: C: RNA-Seq Differential Expression Bash Scripting Error
5.9 years ago by Ido Tamir 5.2k
3
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0
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5.7k
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Answer: A: FastQC:"Per Base Sequence Quality"
6.3 years ago by Ido Tamir 5.2k
2
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4.7k
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Answer: A: Markduplicates in RNASEQ
7.0 years ago by Ido Tamir 5.2k
2
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4.1k
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Comment: C: Paired end vs Single end Differential gene expression analysis
7.1 years ago by Ido Tamir 5.2k
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1
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4.1k
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Comment: C: Paired end vs Single end Differential gene expression analysis
7.1 years ago by Ido Tamir 5.2k
1
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1
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4.1k
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Answer: A: Paired end vs Single end Differential gene expression analysis
7.1 years ago by Ido Tamir 5.2k
1
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0
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2.0k
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Comment: C: RNA-seq amending fasta/fastq files (from one line into two lines)
7.2 years ago by Ido Tamir 5.2k
1
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1
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3.5k
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Comment: C: BWA -> samtools pipe while filtering mapped & unmapped reads
7.3 years ago by Ido Tamir 5.2k
1
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2.1k
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Answer: A: ggplot expression values as function of samples and classes
7.4 years ago by Ido Tamir 5.2k
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1.9k
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Comment: C: wrong bam file format
7.4 years ago by Ido Tamir 5.2k
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1
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1.9k
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Answer: A: wrong bam file format
7.4 years ago by Ido Tamir 5.2k
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3.2k
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Answer: A: FPKM vs READ COUNT
7.5 years ago by Ido Tamir 5.2k
3
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1
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2.5k
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Answer: A: R multiple parameters
7.7 years ago by Ido Tamir 5.2k
1
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1
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2.7k
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Answer: A: How to run Galaxy pipeline using a python code (is there a module, package for g
7.8 years ago by Ido Tamir 5.2k
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1
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1.4k
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Comment: C: Deciding for the threshold for scores?
8.2 years ago by Ido Tamir 5.2k
1
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3.0k
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Comment: C: How to imagine the future of bioinformatics?
8.2 years ago by Ido Tamir 5.2k
2
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1
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3.3k
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Comment: C: Small percentage of overlapping chip-seq peaks
8.2 years ago by Ido Tamir 5.2k
2
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0
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1.6k
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Comment: C: lncRNA annoatation in common crap
8.3 years ago by Ido Tamir 5.2k
1
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0
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2.6k
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Answer: A: read quality of sequence by fastqc
8.4 years ago by Ido Tamir 5.2k
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0
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2.8k
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Comment: C: Mouse RNASeq, 50% discordant reads
8.7 years ago by Ido Tamir 5.2k
3
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0
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3.1k
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Answer: A: Defining ChIP-seq target genes: is there a robust cut-off?
8.8 years ago by Ido Tamir 5.2k
4
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0
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16k
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Answer: Answer: Easiest way to convert python script to web application
updated 2.4 years ago by 44k • written 9.0 years ago by 5.2k
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0
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10k
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Comment: C: Does Illumina Undetermined Fastq files contain barcodes
9.0 years ago by Ido Tamir 5.2k
0
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0
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1.9k
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Comment: C: Human genome full chromosomes build
9.1 years ago by Ido Tamir 5.2k
0
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0
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7.0k
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Answer: A: Bcl to fastq conversion problem in bcl2fastq-2.17
9.2 years ago by Ido Tamir 5.2k
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1
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3.1k
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Comment: C: How to do sequencing reads technical analysis and biological quality analysis fo
9.2 years ago by Ido Tamir 5.2k
1
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0
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1.9k
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Answer: Answer: Rnaseq calibration dataset
updated 2.2 years ago by 44k • written 9.2 years ago by 5.2k
0
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0
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3.1k
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Comment: C: How to do sequencing reads technical analysis and biological quality analysis fo
9.2 years ago by Ido Tamir 5.2k
0
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0
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3.7k
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Comment: Comment: Rank-based GO enrichment packages for R?
updated 2.2 years ago by 44k • written 9.2 years ago by 5.2k
0
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1
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3.7k
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Answer: Answer: Rank-based GO enrichment packages for R?
updated 2.2 years ago by 44k • written 9.3 years ago by 5.2k
1
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0
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5.2k
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Comment: C: RepSeq data processing and analysis
9.3 years ago by Ido Tamir 5.2k
16
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1
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5.3k
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Comment: C: Why is DESeq a better method for finding highly upregulated and downregulated ge
9.4 years ago by Ido Tamir 5.2k
0
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0
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2.8k
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Comment: C: ISMB 2015 biostars meetup attempt (Dublin)
9.4 years ago by Ido Tamir 5.2k
1
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1
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2.8k
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Comment: Comment: ISMB 2015 biostars meetup attempt (Dublin)
updated 2.0 years ago by 44k • written 9.5 years ago by 5.2k
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0
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3.7k
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Comment: Comment: a question about some "basic numbers" for rna-seq experiments
updated 2.0 years ago by 44k • written 9.5 years ago by 5.2k
0
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0
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3.7k
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Answer: Answer: a question about some "basic numbers" for rna-seq experiments
updated 2.0 years ago by 44k • written 9.5 years ago by 5.2k
2
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1
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3.6k
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Answer: A: What is the appropriate approach for ChIPseq protein genome occupancy % calculat
9.5 years ago by Ido Tamir 5.2k
1
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0
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3.5k
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Answer: Answer: Fundamental flaw in ngs.plot - how to overcome?C
updated 24 months ago by 44k • written 9.5 years ago by 5.2k
1
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0
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4.0k
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Comment: Comment: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
updated 23 months ago by 44k • written 9.5 years ago by 5.2k
0
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1
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4.0k
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Comment: Comment: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
updated 23 months ago by 44k • written 9.5 years ago by 5.2k
0
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1
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4.0k
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Comment: Comment: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
updated 23 months ago by 44k • written 9.5 years ago by 5.2k
0
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1
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4.0k
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Comment: Comment: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
updated 23 months ago by 44k • written 9.5 years ago by 5.2k
3
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8
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4.0k
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Blog: Salmon Kallisto HtSeq-count for gene level analysis - Anecdotal evidence
salmon kallisto RNA-Seq htseq-count
updated 23 months ago by 44k • written 9.5 years ago by 5.2k
0
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0
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4.3k
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Comment: C: Plotting and Visualizing large number of genes into chromsome
9.5 years ago by Ido Tamir 5.2k
1
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1
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129k
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Answer: Answer: How to calculate "fold changes" in gene expression?
updated 22 months ago by 44k • written 9.6 years ago by 5.2k
1
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0
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1.7k
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Answer: Answer: skewed cuffdiff result
updated 22 months ago by 44k • written 9.6 years ago by 5.2k
0
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0
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3.3k
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Comment: C: Code for looking for overlaps
9.6 years ago by Ido Tamir 5.2k
0
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1
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3.3k
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Answer: Answer: Code for looking for overlaps
updated 2.4 years ago by 44k • written 9.6 years ago by 5.2k
1
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0
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8.8k
views
Answer: Answer: htseq-count: -s reverse vs -s stranded
updated 2.4 years ago by 44k • written 9.6 years ago by 5.2k
316 results • Page 2 of 7
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