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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
10 weeks ago by User 7754 ▴ 270
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1.4k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
10 weeks ago by User 7754 ▴ 270
0
votes
1
reply
1.4k
views
Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
10 weeks ago by User 7754 ▴ 270
0
votes
1
reply
1.4k
views
Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
11 weeks ago by User 7754 ▴ 270
0
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1
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1.4k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
3 months ago by User 7754 ▴ 270
1
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0
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1.4k
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Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
11 weeks ago by User 7754 ▴ 270
0
votes
1
reply
1.4k
views
Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
3 months ago by User 7754 ▴ 270
0
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2
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1.4k
views
Comment: Comment: Current best practive to liftOver many SNVs from hg19 to GRCh38
3 months ago by User 7754 ▴ 270
5
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17
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1.4k
views
Current best practive to liftOver many SNVs from hg19 to GRCh38
liftOver
10 weeks ago by User 7754 ▴ 270
0
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0
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541
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software and publicly available datasets for eQTLs?
eqtls
19 months ago by User 7754 ▴ 270
5
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19
replies
12k
views
Plot Genes In R Under A Regional Manhattan Plot
r gene plot
updated 4.8 years ago by ★ 3.4k • written 12.4 years ago by ▴ 270
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0
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4.2k
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Comment: C: P-value for enrichment of ChIP-Seq peaks within a genomic annotation
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 270
0
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1
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4.2k
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Comment: C: P-value for enrichment of ChIP-Seq peaks within a genomic annotation
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 270
0
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1
reply
2.6k
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Comment: C: Enrichment determination from random sampling
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 270
1
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1
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5.5k
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Answer: A: GenomicFeatures makeTxDbFromGFF: Select by columns in gtf file
updated 5.0 years ago by 44k • written 9.1 years ago by ▴ 270
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0
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2.6k
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Comment: Comment: bedop: output overlap for each region in a file
updated 2.2 years ago by 44k • written 9.2 years ago by ▴ 270
2
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0
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2.9k
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Answer: A: Is it possible to specify a reference allele while computing LD in Plink?
updated 5.0 years ago by 44k • written 9.2 years ago by ▴ 270
0
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1
reply
1.1k
views
Find region that full captures association signal
GWAS LD pvalue
updated 5.5 years ago by ▴ 460 • written 5.5 years ago by ▴ 270
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1
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3.2k
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Comment: C: How to compute enrichment of one feature in the other across the genome (log fol
5.6 years ago by User 7754 ▴ 270
0
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1
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3.2k
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Comment: C: How to compute enrichment of one feature in the other across the genome (log fol
5.6 years ago by User 7754 ▴ 270
1
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0
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3.2k
views
Comment: C: How to compute enrichment of one feature in the other across the genome (log fol
5.6 years ago by User 7754 ▴ 270
3
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7
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3.2k
views
How to compute enrichment of one feature in the other across the genome (log fold, and pvalue)
genome enrichment
5.6 years ago by User 7754 ▴ 270
0
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1
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1.3k
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Comment: C: Batch download of bed files for all transcription factors associated with a cell
5.6 years ago by User 7754 ▴ 270
2
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3
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1.3k
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Batch download of bed files for all transcription factors associated with a cell type
ChIP-Seq Transcription factors cell-type specific
updated 5.6 years ago by 85k • written 5.6 years ago by ▴ 270
0
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1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
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1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
17
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31
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6.6k
views
Finding the best model for expression data (RNA-Seq counts)
RNA-Seq glm model fit regression
updated 5.7 years ago by 20k • written 5.7 years ago by ▴ 270
1
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2
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6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
1
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0
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6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
1
vote
1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
votes
1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
votes
1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
votes
1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
votes
1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
votes
1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
votes
1
reply
6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
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2
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6.6k
views
Comment: C: Finding the best model for expression data (RNA-Seq counts)
5.7 years ago by User 7754 ▴ 270
0
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0
replies
1.2k
views
Empirical p-value after sampling matching distribution in R
R empirical p-value sampling binning
5.8 years ago by User 7754 ▴ 270
0
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0
replies
7.8k
views
Comment: C: Bedtools Error: Type checker found wrong number of fields while tokenizing data
6.1 years ago by User 7754 ▴ 270
4
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5
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7.8k
views
Bedtools Error: Type checker found wrong number of fields while tokenizing data line.
bedtools
updated 6.1 years ago by 36k • written 6.1 years ago by ▴ 270
0
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1
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7.8k
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Comment: C: Bedtools Error: Type checker found wrong number of fields while tokenizing data
6.1 years ago by User 7754 ▴ 270
0
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0
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1.0k
views
GenomicRanges based on indices or more conditions, and add column from match
genomicRanges overlaps R
6.1 years ago by User 7754 ▴ 270
3
votes
2
replies
2.8k
views
Get indices from GenomicRanges reduce function
GenomicRanges reduce R
updated 6.2 years ago by 11k • written 6.2 years ago by ▴ 270
1
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1
reply
2.5k
views
Comment: C: R reduce across multiple ranges by row
6.2 years ago by User 7754 ▴ 270
0
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1
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2.5k
views
Comment: C: R reduce across multiple ranges by row
6.2 years ago by User 7754 ▴ 270
4
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9
replies
2.5k
views
R reduce across multiple ranges by row
genomicranges R ranges reduce
updated 6.2 years ago by 44k • written 6.2 years ago by ▴ 270
0
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0
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2.5k
views
Comment: C: R reduce across multiple ranges by row
updated 6.2 years ago by 44k • written 6.2 years ago by ▴ 270
3
votes
2
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1.1k
views
R package to annotate and explore effect of biases in RNA Seq
R RNA-Seq annotation
updated 6.3 years ago by 35k • written 6.3 years ago by ▴ 270
0
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1
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1.5k
views
Comment: C: Understanding HiChIP data and interactions
6.3 years ago by User 7754 ▴ 270
2
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3
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1.5k
views
Understanding HiChIP data and interactions
HiChIP
updated 6.3 years ago by 104k • written 6.3 years ago by ▴ 270
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