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Comment: C: Converting raw counts or DEseq2 output to TxDb container
7.2 years ago by tarek.mohamed ▴ 370
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2.0k
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Answer: A: Converting raw counts or DEseq2 output to TxDb container
7.2 years ago by tarek.mohamed ▴ 370
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1
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4.2k
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Answer: C: Download snps within 1Mb from gene
7.2 years ago by tarek.mohamed ▴ 370
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1
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1.3k
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Answer: A: hg19 RNA info
7.2 years ago by tarek.mohamed ▴ 370
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8.6k
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Comment: C: How does regularized log transformed data from DESeq2 relate to read counts?
7.2 years ago by tarek.mohamed ▴ 370
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11k
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Comment: C: HOMER annotatePeaks.pl problem
7.2 years ago by tarek.mohamed ▴ 370
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2
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8.6k
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Answer: A: How does regularized log transformed data from DESeq2 relate to read counts?
7.2 years ago by tarek.mohamed ▴ 370
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0
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8.6k
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Comment: C: How does regularized log transformed data from DESeq2 relate to read counts?
7.2 years ago by tarek.mohamed ▴ 370
1
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0
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3.1k
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Comment: C: ChIPseeker missing full annotation
7.2 years ago by tarek.mohamed ▴ 370
1
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1
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3.1k
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Answer: A: ChIPseeker missing full annotation
7.2 years ago by tarek.mohamed ▴ 370
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1
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13k
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Comment: C: Visualization for ChIP-seq analysis
7.2 years ago by tarek.mohamed ▴ 370
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3.3k
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Comment: C: compare genotypes in two vcf files
7.2 years ago by tarek.mohamed ▴ 370
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3.2k
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Comment: C: lgen to ped using plink
7.2 years ago by tarek.mohamed ▴ 370
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1
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2.9k
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Comment: C: illumina genotype reports _lgen to ped using plink
7.2 years ago by tarek.mohamed ▴ 370
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0
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2.9k
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Comment: C: Compare genotypes from sequencing (vcf) and microarrays (ped)
7.2 years ago by tarek.mohamed ▴ 370
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1
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2.9k
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Comment: C: illumina genotype reports _lgen to ped using plink
7.2 years ago by tarek.mohamed ▴ 370
0
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5
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2.9k
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illumina genotype reports _lgen to ped using plink
lgen ped plink illumina genotype report
updated 7.2 years ago by 11k • written 7.2 years ago by ▴ 370
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1.5k
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Comment: C: comparing two illumina genotypes report
7.2 years ago by tarek.mohamed ▴ 370
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2
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1.5k
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comparing two illumina genotypes report
gtc_files
updated 7.2 years ago by 12k • written 7.2 years ago by ▴ 370
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1
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5.7k
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Comment: C: How to extract raw genotype calls from idat or gtc illumina files
7.2 years ago by tarek.mohamed ▴ 370
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2
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2.3k
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Comment: C: Transcription factor enrichment analysis
7.4 years ago by tarek.mohamed ▴ 370
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2.3k
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Comment: C: Transcription factor enrichment analysis
7.4 years ago by tarek.mohamed ▴ 370
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6
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2.3k
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Transcription factor enrichment analysis
RNA-Seq ChIP-Seq
updated 7.4 years ago by ★ 2.8k • written 7.4 years ago by ▴ 370
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1.5k
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Comment: C: how to search for retinoic acid response element in my sequence file
7.4 years ago by tarek.mohamed ▴ 370
1
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2
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1.5k
views
how to search for retinoic acid response element in my sequence file
mapping DNA-seq RARE
updated 7.4 years ago by 101k • written 7.4 years ago by ▴ 370
1
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2
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4.6k
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chip-seq analysis and peak annotation
ChIP-Seq
updated 7.5 years ago by ★ 3.2k • written 7.5 years ago by ▴ 370
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1
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2.5k
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Comment: C: Chip-seq data and Hi C data
7.6 years ago by tarek.mohamed ▴ 370
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3
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2.5k
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Chip-seq data and Hi C data
ChIP-Seq hi-c
updated 7.6 years ago by 13k • written 7.6 years ago by ▴ 370
1
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2
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3.7k
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ChIPpeakAnno toGRanges error
ChIPpeakAnno toGRanges chip-seek
updated 7.6 years ago by ★ 2.1k • written 7.6 years ago by ▴ 370
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2
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3.2k
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can not install "ChIPpeakAnno"
ChIPpeakAnno
7.6 years ago by tarek.mohamed ▴ 370
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1
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4.5k
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Comment: C: how to exclude set of genes from a txdb
7.6 years ago by tarek.mohamed ▴ 370
1
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7
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4.5k
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how to exclude set of genes from a txdb
txdb
7.6 years ago by tarek.mohamed ▴ 370
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1
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4.5k
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Comment: A: how to exclude set of genes from a txdb
updated 7.6 years ago by 164k • written 7.6 years ago by ▴ 370
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0
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3.0k
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Chip-Seq peaks annotation
ChIP-Seq chipseeker
7.6 years ago by tarek.mohamed ▴ 370
0
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0
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2.8k
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Comment: C: How to increase the speed of subread for DNA whole genome sequence
8.2 years ago by tarek.mohamed ▴ 370
0
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1
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2.8k
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Comment: C: How to increase the speed of subread for DNA whole genome sequence
8.2 years ago by tarek.mohamed ▴ 370
0
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1
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2.8k
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Comment: C: How to increase the speed of subread for DNA whole genome sequence
8.2 years ago by tarek.mohamed ▴ 370
0
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1
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2.5k
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Comment: C: rsubread exactsnp ERROR "memory not mapped"
8.2 years ago by tarek.mohamed ▴ 370
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0
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2.5k
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Comment: C: rsubread exactsnp ERROR "memory not mapped"
8.2 years ago by tarek.mohamed ▴ 370
0
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4
replies
2.5k
views
rsubread exactsnp ERROR "memory not mapped"
Rsubread exactSNP
updated 8.2 years ago by 147k • written 8.2 years ago by ▴ 370
1
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1
reply
2.7k
views
study power / sample size estimation for GWAS
gwas power sample size
8.3 years ago by tarek.mohamed ▴ 370
1
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2
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2.9k
views
topgo rnaseq error
topgo RNA-Seq
updated 8.3 years ago by 147k • written 8.3 years ago by ▴ 370
1
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0
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2.9k
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Comment: C: topgo rnaseq error
8.3 years ago by tarek.mohamed ▴ 370
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0
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2.9k
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Answer: A: topgo rnaseq error
8.3 years ago by tarek.mohamed ▴ 370
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3.1k
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Comment: C: topgo for rnaseq ERROR
8.3 years ago by tarek.mohamed ▴ 370
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2
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3.1k
views
topgo for rnaseq ERROR
topgo RNA-Seq
updated 8.3 years ago by 104k • written 8.3 years ago by ▴ 370
0
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1
reply
1.6k
views
SpiliceMap processing time
RNA-Seq quasr splicemap
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 370
1
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1
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1.9k
views
Bowtie and % of RNA-Seq mappability.
RNA-Seq QuasR Bowtie
updated 2.3 years ago by 44k • written 8.8 years ago by ▴ 370
0
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0
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1.9k
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txdb object for qCount ()
txdb
updated 2.5 years ago by 44k • written 8.9 years ago by ▴ 370
0
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0
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2.0k
views
qCount in QuasR for RNAseq quantification
quasr R
updated 2.5 years ago by 44k • written 8.9 years ago by ▴ 370
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