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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.1 years ago by Assa Yeroslaviz ★ 1.9k
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2
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5.5k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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5.5k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.1 years ago by Assa Yeroslaviz ★ 1.9k
11
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17
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5.5k
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How do one analyze data from SMART-Seq stranded kit (v4)?
single-cell smart-seq
updated 2.1 years ago by ★ 7.3k • written 2.1 years ago by ★ 1.9k
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5.5k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.1 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
2
replies
5.5k
views
Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
2.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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579
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bamComparing ChIp-Seq samples with strange coverage between chipped and Input
normalization bamCompare deepTools
updated 21 months ago by 45k • written 2.1 years ago by ★ 1.9k
4
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4
replies
5.4k
views
STAR aligner can't map too short reads
ribo-seq star
updated 2.2 years ago by 21k • written 2.2 years ago by ★ 1.9k
1
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1
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1.5k
views
Comment: Comment: How to calculate the offset for a riboseq experiment
2.3 years ago by Assa Yeroslaviz ★ 1.9k
4
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3
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1.5k
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How to calculate the offset for a riboseq experiment
sequencing p-site riboseq offset
updated 2.3 years ago by ▴ 410 • written 2.3 years ago by ★ 1.9k
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0
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2.0k
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Comment: Comment: How to interpret the nine-square plot from mageckFlute
2.3 years ago by Assa Yeroslaviz ★ 1.9k
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0
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2.0k
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Comment: Comment: How to interpret the nine-square plot from mageckFlute
2.3 years ago by Assa Yeroslaviz ★ 1.9k
5
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4
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2.0k
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How to interpret the nine-square plot from mageckFlute
mageck mageckFlute squareView scatterplot
2.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
1.3k
views
Comment: Comment: Need help understanding GEO data structure
2.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
1.3k
views
Comment: Comment: Need help understanding GEO data structure
2.4 years ago by Assa Yeroslaviz ★ 1.9k
1
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5
replies
1.3k
views
Need help understanding GEO data structure
Run-Selector GEO gene-expression-omnibus
updated 2.4 years ago by 150k • written 2.4 years ago by ★ 1.9k
4
votes
2
replies
855
views
How to extract min and max values of a gene from different columns
group_by tibble tidyverse
updated 2.4 years ago by 15k • written 2.4 years ago by ★ 1.9k
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0
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745
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Comment: Comment: expanding a table by duplicating rows of a specific pattern
2.5 years ago by Assa Yeroslaviz ★ 1.9k
3
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2
replies
745
views
expanding a table by duplicating rows of a specific pattern
tidyyverse dplyr R data.frame
2.5 years ago by Assa Yeroslaviz ★ 1.9k
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0
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4.8k
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Comment: Comment: Dealing with nanopore fast5 files compressed with vbz
2.6 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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848
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Comment: Comment: Identifying binding sequences of a specific protein to its target
2.6 years ago by Assa Yeroslaviz ★ 1.9k
2
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3
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848
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Identifying binding sequences of a specific protein to its target
transcription-factor-binding-site gene-regulation transcription-factor
2.6 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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930
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Comment: Comment: Ca you help me understand the Nanopore fastqc results?
2.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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2
replies
930
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Ca you help me understand the Nanopore fastqc results?
pycoQC long-read-seq nanopore fastqc
2.9 years ago by Assa Yeroslaviz ★ 1.9k
8
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7
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4.5k
views
Help me understand the Nanopore fastqc results
long-read-seq nanopore fastqc
updated 2.9 years ago by 102k • written 2.9 years ago by ★ 1.9k
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1
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4.5k
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Comment: Comment: Help me understand the Nanopore fastqc results
2.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
4.5k
views
Comment: Comment: Help me understand the Nanopore fastqc results
2.9 years ago by Assa Yeroslaviz ★ 1.9k
15
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11
replies
9.7k
views
6 follow
filter out fasta File by pattern
pattern fasta awk sed regexp
updated 2.9 years ago by 21k • written 10.1 years ago by ★ 1.9k
0
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0
replies
460
views
pQTL analysis
plink GWAS pQTL linkage-disequilibrium
3.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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559
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Understanding DEXSeq results
dexseq normalization counts
3.1 years ago by Assa Yeroslaviz ★ 1.9k
3
votes
1
reply
688
views
Basic understanding of Hi-C and interacion (contact-) maps
TADs interactions contact-maps AB-compartments HiC
updated 3.2 years ago by 87k • written 3.2 years ago by ★ 1.9k
1
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1
reply
1.0k
views
Hoe do you do differential Splicing using edgeR command diffSpliceDGE?
differential-splicing edger diffSpliceDGE
updated 3.2 years ago by ▴ 130 • written 3.2 years ago by ★ 1.9k
1
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1
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1.8k
views
Comment: Comment: Online training - Snakemake: Reproducible and Scalable Bioinformatic Workflows
3.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
6.7k
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Comment: Comment: How do I compare reads between two bam file?
3.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
6.7k
views
Comment: Comment: How do I compare reads between two bam file?
3.5 years ago by Assa Yeroslaviz ★ 1.9k
5
votes
5
replies
6.7k
views
How do I compare reads between two bam file?
samtools reads bam compare
updated 3.5 years ago by 165k • written 3.5 years ago by ★ 1.9k
0
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0
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12k
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Comment: Comment: How Find Genes On Specific Positions
3.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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3.0k
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Comment: Comment: DESeq2 model matrix not full rank
3.8 years ago by Assa Yeroslaviz ★ 1.9k
1
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0
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2.1k
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Comment: Comment: DESeq2 comparison two cell types and two genotypes
3.9 years ago by Assa Yeroslaviz ★ 1.9k
2
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1
reply
2.2k
views
Comment: Comment: Failing to run tblastn
3.9 years ago by Assa Yeroslaviz ★ 1.9k
4
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4
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2.2k
views
Answer: Answer: Failing to run tblastn
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.2k
views
Comment: Comment: Failing to run tblastn
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.2k
views
Comment: Comment: Failing to run tblastn
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.2k
views
Comment: Comment: Failing to run tblastn
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.1k
views
Comment: Comment: DESeq2 comparison two cell types and two genotypes
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
51k
views
Comment: Comment: Bam File: Change Chromosome Notation
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
601
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comparing distinct peaks from riboseq profiling results
ribosomal-profiling ribo-seq peaks
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
51k
views
Comment: Comment: Bam File: Change Chromosome Notation
3.9 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
0
replies
991
views
adjust size of png images in a rasterGrob object
rasterGrob PNG Rmarkdown layout
4.0 years ago by Assa Yeroslaviz ★ 1.9k
2
votes
1
reply
918
views
Mapping after WGS show a parabel form
WGS mapping SNP CNV
updated 4.0 years ago by ▴ 20 • written 4.0 years ago by ★ 1.9k
612 results • Page 3 of 13
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