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0
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1.8k
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Comment: C: Mapping different mouse strains to mm10
4.9 years ago by Assa Yeroslaviz ★ 1.9k
4
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4
replies
1.8k
views
Mapping different mouse strains to mm10
hybrid-mouse RNA-Seq scRNA
4.9 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
52k
views
Comment: Comment: Bam File: Change Chromosome Notation
updated 4.9 years ago by 45k • written 13.6 years ago by ★ 1.9k
0
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2
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8.5k
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Comment: C: Converting scRNA-Seq to Bulk-RNASeq
4.9 years ago by Assa Yeroslaviz ★ 1.9k
5
votes
5
replies
8.5k
views
Converting scRNA-Seq to Bulk-RNASeq
scRNASeq bulk-RNASeq RNA-Seq single-cell
updated 14 months ago by • 0 • written 4.9 years ago by ★ 1.9k
3
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1
reply
3.5k
views
subsetting seurat object with multiple samples
scRNA-Seq seurat
updated 5.0 years ago by ★ 19k • written 5.0 years ago by ★ 1.9k
0
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0
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1.9k
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Comment: C: Error in Heatmap creation with RnBeads
5.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
939
views
coverage per chromosome for bisulphite Seq data show unexpected distribution
bismark bisulphite BS-Seq chromosome coverage
updated 5.0 years ago by 20 • written 5.1 years ago by ★ 1.9k
0
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1
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1.9k
views
Comment: C: Error in Heatmap creation with RnBeads
5.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
1.9k
views
Comment: C: Error in Heatmap creation with RnBeads
5.0 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
1.9k
views
Comment: C: Error in Heatmap creation with RnBeads
5.0 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
0
replies
1.9k
views
Comment: C: Error in Heatmap creation with RnBeads
5.0 years ago by Assa Yeroslaviz ★ 1.9k
2
votes
8
replies
1.9k
views
Error in Heatmap creation with RnBeads
BS-Seq RnBeads
updated 5.0 years ago by ▴ 50 • written 5.0 years ago by ★ 1.9k
4
votes
2
replies
2.7k
views
What sequence do I get when using paired-end stranded protocol
RNA-Seq directional stranded paired-end sequencing
updated 5.0 years ago by ★ 1.9k • written 5.0 years ago by ★ 1.9k
0
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0
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2.5k
views
Comment: C: Run RnBeads with 'bismarkCytosine' files
5.1 years ago by Assa Yeroslaviz ★ 1.9k
2
votes
4
replies
2.5k
views
Run RnBeads with 'bismarkCytosine' files
rnbeads bismark 'bismarkCytosine'
updated 5.1 years ago by ▴ 50 • written 5.1 years ago by ★ 1.9k
0
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0
replies
2.0k
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Comment: C: translating a bam file to protein sequences
5.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.0k
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Comment: C: translating a bam file to protein sequences
5.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.0k
views
Comment: C: translating a bam file to protein sequences
5.1 years ago by Assa Yeroslaviz ★ 1.9k
3
votes
6
replies
2.0k
views
translating a bam file to protein sequences
bam protein translate samtools
5.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.5k
views
Comment: C: Run RnBeads with 'bismarkCytosine' files
5.1 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
4
replies
2.2k
views
load.rnb.set throws multiple warnings when uploading an object
RnBeads Bi-Sulphite-Seq
updated 5.1 years ago by ▴ 50 • written 5.1 years ago by ★ 1.9k
0
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1
reply
2.2k
views
Comment: A: load.rnb.set throws multiple warnings when uploading an object
5.1 years ago by Assa Yeroslaviz ★ 1.9k
3
votes
1
reply
1.2k
views
creating interactive plots with bigPint in a DESeq2 analysis
bigPint deseq2 plots RNA-Seq
updated 5.2 years ago by ▴ 60 • written 5.3 years ago by ★ 1.9k
1
vote
0
replies
1.0k
views
annovar mpileup2cns and mpileup2indel give different results
annovar SNP variant-analysis
5.3 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
4
replies
2.2k
views
Calculate correlations between ChipSeq data sets
chipseq correlation peaks bedgraph macs2
updated 5.3 years ago by ★ 2.1k • written 5.3 years ago by ★ 1.9k
1
vote
2
replies
1.5k
views
sample-specific filtering of counts matrix
counts RNA-Seq deseq2 condition
5.3 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
0
replies
2.0k
views
Comment: C: sorting for bedtools genomecov doesn't work properly
5.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.0k
views
Comment: C: sorting for bedtools genomecov doesn't work properly
5.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.0k
views
Comment: C: sorting for bedtools genomecov doesn't work properly
5.3 years ago by Assa Yeroslaviz ★ 1.9k
4
votes
7
replies
2.0k
views
sorting for bedtools genomecov doesn't work properly
bedtools sort bedpe RNA-Seq bedgraph
updated 5.3 years ago by 89k • written 5.3 years ago by ★ 1.9k
0
votes
0
replies
2.6k
views
Answer: Answer: What are the most important conferences in Proteomics?
updated 2.7 years ago by 45k • written 5.3 years ago by ★ 1.9k
0
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1
reply
11k
views
Comment: C: GSEA PreRanked lists from DESeq2 results table
5.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.1k
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Comment: C: bcl2fastq results in Poly-N in R1
5.3 years ago by Assa Yeroslaviz ★ 1.9k
3
votes
6
replies
2.1k
views
bcl2fastq results in Poly-N in R1
bcl2fastq paired-end RNA-Seq scRNA-Seq single-cell
updated 5.3 years ago by 151k • written 5.3 years ago by ★ 1.9k
0
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0
replies
2.1k
views
Comment: C: bcl2fastq results in Poly-N in R1
5.3 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.9k
views
Comment: C: No rule keywords allowed after run in snakefile
5.3 years ago by Assa Yeroslaviz ★ 1.9k
3
votes
3
replies
2.9k
views
No rule keywords allowed after run in snakefile
snakemake run python
updated 5.3 years ago by ▴ 700 • written 5.3 years ago by ★ 1.9k
0
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1
reply
11k
views
Comment: C: GSEA PreRanked lists from DESeq2 results table
5.3 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
0
replies
11k
views
Comment: C: GSEA PreRanked lists from DESeq2 results table
5.3 years ago by Assa Yeroslaviz ★ 1.9k
15
votes
15
replies
11k
views
7 follow
GSEA PreRanked lists from DESeq2 results table
gsea deseq2 preranked fgsea
updated 5.3 years ago by ▴ 730 • written 5.4 years ago by ★ 1.9k
2
votes
3
replies
3.4k
views
missing coeeficients in resultsNames(dds)
deseq2 design
5.4 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
3.4k
views
Comment: C: missing coeeficients in resultsNames(dds)
5.4 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
0
replies
2.8k
views
Comment: C: salmon quantification vs. star mapping
5.4 years ago by Assa Yeroslaviz ★ 1.9k
3
votes
2
replies
2.8k
views
salmon quantification vs. star mapping
salmon star alignment mapping
5.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
3.8k
views
Answer: A: Mirna Sequence Using Biomart R Package
updated 5.4 years ago by 45k • written 11.1 years ago by ★ 1.9k
0
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0
replies
3.7k
views
Comment: C: cell sizes in R plots
updated 5.5 years ago by 45k • written 11.1 years ago by ★ 1.9k
0
votes
1
reply
3.7k
views
Comment: C: cell sizes in R plots
updated 5.5 years ago by 45k • written 11.1 years ago by ★ 1.9k
3
votes
2
replies
3.2k
views
Answer: C: FastQ files - Is the content of the + line requiered or I can get rid of it?
updated 5.5 years ago by 45k • written 11.1 years ago by ★ 1.9k
0
votes
0
replies
6.2k
views
Comment: C: HOWTO extract regions from GRanges object
updated 5.5 years ago by 45k • written 9.4 years ago by ★ 1.9k
617 results • Page 5 of 13
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