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Comment: C: can delly identify multiple copies of a unique deletion?
5.8 years ago by Assa Yeroslaviz ★ 1.9k
0
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3
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1.2k
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can delly identify multiple copies of a unique deletion?
delly cnv
updated 5.8 years ago by ★ 2.6k • written 5.8 years ago by ★ 1.9k
0
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0
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1.4k
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Comment: C: What is the best way to costract a Crispr library
5.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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2
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1.4k
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What is the best way to costract a Crispr library
crispr library sgRNA
5.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
778
views
combine shRNA-Seq on gene level
shRNA-seq NGS limma roast
6.0 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
1.2k
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calculating extinction coefficient for thousands of peptides
extinction extinction coefficient peptides cran
6.1 years ago by Assa Yeroslaviz ★ 1.9k
47
votes
10
replies
24k
views
9 follow
The Difference Between Directional And Nondirectional Sequencing
non sequencing rna
updated 6.3 years ago by • 0 • written 12.9 years ago by ★ 1.9k
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0
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5.7k
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Comment: C: unmapped reads in paired-end run pf bowtie2
6.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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5.7k
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Comment: C: unmapped reads in paired-end run pf bowtie2
6.4 years ago by Assa Yeroslaviz ★ 1.9k
1
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7
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5.7k
views
unmapped reads in paired-end run pf bowtie2
paired-end bowtie unmapped-reads
updated 6.4 years ago by 104k • written 6.4 years ago by ★ 1.9k
0
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0
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5.7k
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Comment: C: unmapped reads in paired-end run pf bowtie2
6.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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5.7k
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Comment: C: unmapped reads in paired-end run pf bowtie2
6.4 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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2.8k
views
Comment: C: BioMart dataset for S pombe
6.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.5k
views
Comment: C: extracting orphan reads from bam file
6.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
3.0k
views
Comment: C: detecting insertion sites of transgene in mouse genome
6.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
2.5k
views
Comment: C: extracting orphan reads from bam file
6.5 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
3
replies
2.5k
views
extracting orphan reads from bam file
bam samtools bwa
updated 20 months ago by 44k • written 6.5 years ago by ★ 1.9k
0
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0
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3.0k
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Comment: C: detecting insertion sites of transgene in mouse genome
6.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
3.0k
views
Comment: C: detecting insertion sites of transgene in mouse genome
6.5 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
3.0k
views
Comment: C: detecting insertion sites of transgene in mouse genome
6.6 years ago by Assa Yeroslaviz ★ 1.9k
4
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9
replies
3.0k
views
detecting insertion sites of transgene in mouse genome
transgene insertion blast WGS
updated 6.6 years ago by ★ 3.3k • written 6.6 years ago by ★ 1.9k
0
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0
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3.0k
views
Comment: C: detecting insertion sites of transgene in mouse genome
6.6 years ago by Assa Yeroslaviz ★ 1.9k
3
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2
replies
10.0k
views
Bed File Bedpe Format
bedtools bam bed conversion
updated 6.6 years ago by 20 • written 13.3 years ago by ★ 1.9k
0
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1
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1.8k
views
has anyone ever worked with the CNCI tool
CNCI lncRNA non-coding
updated 6.7 years ago by 20 • written 6.8 years ago by ★ 1.9k
0
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0
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949
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How to analyse data from genetic screening followed by NGS ?
screening gene-trapping gRNA crispr DE-analysis
6.8 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
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5.4k
views
Comment: C: subset gtf file based on coordinates
6.8 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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5.4k
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Comment: C: subset gtf file based on coordinates
6.8 years ago by Assa Yeroslaviz ★ 1.9k
3
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5
replies
5.4k
views
subset gtf file based on coordinates
RNA-Seq bed gtf subset genomic ranges
updated 6.8 years ago by 85k • written 6.8 years ago by ★ 1.9k
0
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0
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1.5k
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Comment: C: DE analysis of lncRNA from C elegans
6.8 years ago by Assa Yeroslaviz ★ 1.9k
0
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2
replies
1.5k
views
DE analysis of lncRNA from C elegans
lncRNA differential expression deseq2 limma
updated 6.8 years ago by 14k • written 6.8 years ago by ★ 1.9k
0
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1
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3.2k
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Comment: C: allelic specific expression with Kallisto
6.9 years ago by Assa Yeroslaviz ★ 1.9k
2
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4
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3.2k
views
allelic specific expression with Kallisto
Kallisto ASE allele-specific mapping RNA-Seq
6.9 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
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1.4k
views
Comment: C: Hierarchical mapping of RNA-Seq data
7.0 years ago by Assa Yeroslaviz ★ 1.9k
1
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2
replies
1.4k
views
Hierarchical mapping of RNA-Seq data
mapping RNA-Seq Hierarchical
updated 7.0 years ago by 6.9k • written 7.0 years ago by ★ 1.9k
9
votes
1
reply
14k
views
Heat Map With Two Color Scales
heatmap r
updated 7.0 years ago by 20 • written 11.1 years ago by ★ 1.9k
6
votes
8
replies
2.8k
views
Differential expression analysis of non-coding RNA-Seq data
deseq2 edger ncRNA
updated 7.0 years ago by 20 • written 7.2 years ago by ★ 1.9k
0
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1
reply
2.3k
views
Time series analysis from ChIP-Seq data
ChIP-Seq time-course time-series
updated 7.1 years ago by 12k • written 7.2 years ago by ★ 1.9k
0
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0
replies
1.3k
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Comment: C: calling objects from an embedded function
7.1 years ago by Assa Yeroslaviz ★ 1.9k
0
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2
replies
1.3k
views
calling objects from an embedded function
function nested-function object
7.1 years ago by Assa Yeroslaviz ★ 1.9k
1
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0
replies
2.8k
views
Comment: C: Differential expression analysis of non-coding RNA-Seq data
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
2.8k
views
Comment: C: Differential expression analysis of non-coding RNA-Seq data
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
2.8k
views
Comment: C: Differential expression analysis of non-coding RNA-Seq data
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
2.8k
views
Comment: C: Differential expression analysis of non-coding RNA-Seq data
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
1
reply
1.9k
views
Comment: C: geom_line with hclust data of expression matrix
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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1
reply
1.9k
views
Comment: C: geom_line with hclust data of expression matrix
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
1.9k
views
Comment: C: geom_line with hclust data of expression matrix
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
votes
6
replies
1.9k
views
geom_line with hclust data of expression matrix
ggplot hclust clustering
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
1.2k
views
genome-wide gene occupancy profiles
ChIP-Seq occupany profile bedgraph
7.2 years ago by Assa Yeroslaviz ★ 1.9k
0
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0
replies
1.2k
views
ChIP-chip ANalysis of NimbleGen tiling arrays
chip-chip peak-calling differential-binding arrays
7.3 years ago by Assa Yeroslaviz ★ 1.9k
1
vote
1
reply
2.6k
views
how to calculate with metadata of GRanges Objects
genomicranges rtracklayer bigwig granges macs2
7.3 years ago by Assa Yeroslaviz ★ 1.9k
607 results • Page 7 of 13
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