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Comment: C: Lowest common ancestor for taxonomy
7.2 years ago by David ▴ 240
0
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0
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3.0k
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Comment: C: Lowest common ancestor for taxonomy
7.2 years ago by David ▴ 240
0
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4
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3.0k
views
Lowest common ancestor for taxonomy
lca taxonomy ncbi tree
updated 7.2 years ago by 20k • written 7.2 years ago by ▴ 240
0
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0
replies
2.7k
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Comment: C: Extract Intergenic Sequences from GenBank File with Perl
7.2 years ago by David ▴ 240
0
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0
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2.7k
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Comment: C: Extract Intergenic Sequences from GenBank File with Perl
7.2 years ago by David ▴ 240
0
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1
reply
6.2k
views
Comment: C: Parse fasta header with regex in python
7.3 years ago by David ▴ 240
9
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11
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6.2k
views
Parse fasta header with regex in python
biopython python fasta regex
updated 7.3 years ago by 11k • written 7.3 years ago by ▴ 240
0
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0
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6.2k
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Comment: C: Parse fasta header with regex in python
7.3 years ago by David ▴ 240
0
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1
reply
6.2k
views
Comment: C: Parse fasta header with regex in python
7.3 years ago by David ▴ 240
0
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0
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6.2k
views
Comment: C: Parse fasta header with regex in python
7.3 years ago by David ▴ 240
10
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18
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8.2k
views
Download NCBI genomes using taxonomy id (taxid)
ncbi python efetch biopython
updated 3.2 years ago by 55k • written 7.7 years ago by ▴ 240
0
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2
replies
1.4k
views
Simulated overlapping paired end reads for 16S
bbmap
7.4 years ago by David ▴ 240
0
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1
reply
1.7k
views
Get non redundant from Bacteria Archaea Fungi
ncbi RNA-Seq
7.4 years ago by David ▴ 240
0
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0
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2.0k
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Answer: A: Lowest common ancestor
7.4 years ago by David ▴ 240
1
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2
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2.0k
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Lowest common ancestor
lca taxonomy
7.4 years ago by David ▴ 240
0
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0
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4.9k
views
Comment: C: fastqc gc-content peak and adapter content
7.4 years ago by David ▴ 240
5
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2
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4.9k
views
fastqc gc-content peak and adapter content
fastqc
7.4 years ago by David ▴ 240
2
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5
replies
5.0k
views
Normalize bedtools gene coverage by total number of reads
bedtools normalization metagenomics
7.5 years ago by David ▴ 240
0
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1
reply
5.0k
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Comment: A: Normalize bedtools gene coverage by total number of reads
7.5 years ago by David ▴ 240
0
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0
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5.0k
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Comment: A: Normalize bedtools gene coverage by total number of reads
7.5 years ago by David ▴ 240
0
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0
replies
5.0k
views
Comment: A: Normalize bedtools gene coverage by total number of reads
7.5 years ago by David ▴ 240
10
votes
3
replies
3.6k
views
Metagenomics functional annotation hmmsearch vs Blast ???
eggnog hmm metagenomics blast
updated 7.6 years ago by 4.1k • written 7.7 years ago by ▴ 240
0
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2
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4.5k
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Comment: C: Normalization methods for metagenomics WGS data (not 16S data)
7.6 years ago by David ▴ 240
0
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1
reply
4.5k
views
Comment: A: Normalization methods for metagenomics WGS data (not 16S data)
7.6 years ago by David ▴ 240
0
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0
replies
1.9k
views
UniFrac in R with just the OTU table?
R unifrac phylogeny metagenomics
7.6 years ago by David ▴ 240
0
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0
replies
9.7k
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Comment: A: Get phylogenetic tree from abundance table
7.6 years ago by David ▴ 240
0
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0
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9.7k
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Comment: A: Get phylogenetic tree from abundance table
7.6 years ago by David ▴ 240
5
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7
replies
9.7k
views
Get phylogenetic tree from abundance table
phylogenetic newick ncbi
7.6 years ago by David ▴ 240
0
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1
reply
9.7k
views
Comment: A: Get phylogenetic tree from abundance table
7.6 years ago by David ▴ 240
0
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1
reply
8.2k
views
Comment: C: Download NCBI genomes using taxonomy id (taxid)
7.7 years ago by David ▴ 240
0
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0
replies
8.2k
views
Comment: C: Download NCBI genomes using taxonomy id (taxid)
7.7 years ago by David ▴ 240
0
votes
2
replies
8.2k
views
Comment: C: Download NCBI genomes using taxonomy id (taxid)
7.7 years ago by David ▴ 240
0
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1
reply
8.2k
views
Comment: C: Download NCBI genomes using taxonomy id (taxid)
7.7 years ago by David ▴ 240
0
votes
1
reply
39k
views
Comment: C: Fetching Genbank Entries For List Of Accession Numbers.
7.7 years ago by David ▴ 240
0
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0
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1.9k
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Comment: A: Gene copy number
7.8 years ago by David ▴ 240
0
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2
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1.9k
views
Gene copy number
metagenomics bwa bbmap
7.8 years ago by David ▴ 240
0
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0
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3.4k
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Comment: C: Contigs Taxonomy from assembled metagenomes
7.8 years ago by David ▴ 240
0
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2
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3.4k
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Comment: A: Contigs Taxonomy from assembled metagenomes
7.8 years ago by David ▴ 240
1
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5
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3.4k
views
Contigs Taxonomy from assembled metagenomes
metagenomics metagenome taxonomy contig
7.8 years ago by David ▴ 240
0
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1
reply
7.2k
views
Comment: C: Relative abundance fro metagenomics samples
7.8 years ago by David ▴ 240
0
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2
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7.2k
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Answer: A: Relative abundance fro metagenomics samples
7.8 years ago by David ▴ 240
0
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0
replies
1.7k
views
Answer: A: How to reassembly metagenomics bins - need advice??
7.9 years ago by David ▴ 240
0
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2
replies
1.7k
views
How to reassembly metagenomics bins - need advice??
metagenomics Assembly bwa bowtie2
7.9 years ago by David ▴ 240
0
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1
reply
3.8k
views
Answer: A: Find human contaminants in metagenomics microbiome studies
7.9 years ago by David ▴ 240
1
vote
6
replies
3.8k
views
Find human contaminants in metagenomics microbiome studies
bwa microbiome metagenomics wgs
updated 2.6 years ago by ▴ 10 • written 7.9 years ago by ▴ 240
0
votes
1
reply
2.1k
views
Design primer for a family of bacterial genes
sequencing PCR sequence
updated 8.0 years ago by ★ 4.0k • written 8.0 years ago by ▴ 240
2
votes
2
replies
2.5k
views
Scaffolding for metagenomics
abyss assembly
updated 2.4 years ago by 44k • written 8.8 years ago by ▴ 240
0
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0
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1.7k
views
Metagenomics scaffolding tools ??
scaffolding metagenomics
8.8 years ago by David ▴ 240
98 results • Page 2 of 2
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