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0
votes
0
replies
2.2k
views
Comment:
C: how to perform GWAS on UKBiobank data?
5.4 years ago by
GZ1995
▴ 410
0
votes
0
replies
4.0k
views
Comment:
C: limma voom analysis with multiple comparisons
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
4.0k
views
Comment:
C: limma voom analysis with multiple comparisons
8.1 years ago by
GZ1995
▴ 410
1
vote
1
reply
8.5k
views
Comment:
C: Using ComBat on RNASeq FPKM counts
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
8.5k
views
Comment:
C: Using ComBat on RNASeq FPKM counts
8.1 years ago by
GZ1995
▴ 410
1
vote
0
replies
1.5k
views
Comment:
C: Uneven number of control/treatment replicates
8.1 years ago by
GZ1995
▴ 410
1
vote
0
replies
2.9k
views
Comment:
C: Gene function KEGG and GSEA
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
2.9k
views
Comment:
C: Gene function KEGG and GSEA
8.1 years ago by
GZ1995
▴ 410
0
votes
0
replies
2.9k
views
Comment:
C: Question about checking the regression assumptions?
8.1 years ago by
GZ1995
▴ 410
1
vote
1
reply
2.9k
views
Comment:
C: Question about checking the regression assumptions?
8.1 years ago by
GZ1995
▴ 410
0
votes
0
replies
2.3k
views
Comment:
C: What are the most important unresolved problems in Bioinformatics?
8.1 years ago by
GZ1995
▴ 410
0
votes
0
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5.2k
views
Answer:
C: Ma plot labelling
8.1 years ago by
GZ1995
▴ 410
1
vote
0
replies
2.9k
views
Comment:
C: downloading many sra files for single cell analysis
8.1 years ago by
GZ1995
▴ 410
0
votes
0
replies
6.3k
views
Comment:
C: Checking potential batch effects with svaseq
8.1 years ago by
GZ1995
▴ 410
1
vote
0
replies
2.8k
views
Comment:
C: H3K27Ac Mark Atlas in Human Genomes
8.1 years ago by
GZ1995
▴ 410
2
votes
1
reply
4.8k
views
Comment:
C: mirDeep2 using bowtie vs. bwa - why do more aligned reads yield less miRNA
8.1 years ago by
GZ1995
▴ 410
0
votes
0
replies
3.0k
views
Comment:
C: Removing GC content bias and trended bias from ChIP-seq data
8.1 years ago by
GZ1995
▴ 410
6
votes
1
reply
13k
views
Comment:
C: pca analysis for differential gene expression data of microarray samples of simi
8.1 years ago by
GZ1995
▴ 410
0
votes
0
replies
6.9k
views
Comment:
C: Running multiQC on more than one file Log.final.out from STAR
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
19k
views
Comment:
C: TrimGalore! on multiple paired fastq files
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
6.9k
views
Comment:
C: Running multiQC on more than one file Log.final.out from STAR
8.1 years ago by
GZ1995
▴ 410
3
votes
2
replies
19k
views
Comment:
C: TrimGalore! on multiple paired fastq files
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
6.9k
views
Answer:
A: Running multiQC on more than one file Log.final.out from STAR
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
2.9k
views
Comment:
C: Confused regarding the conflicting information on pre-processing RNA-seq
8.1 years ago by
GZ1995
▴ 410
1
vote
0
replies
4.0k
views
Comment:
C: edgeR artifacts on p-value and/or fold change?
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
4.0k
views
Comment:
C: edgeR artifacts on p-value and/or fold change?
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
4.0k
views
Comment:
C: edgeR artifacts on p-value and/or fold change?
8.1 years ago by
GZ1995
▴ 410
0
votes
0
replies
4.0k
views
Comment:
C: edgeR Gene Ontology Analysis always returns the same list of pathways
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
4.0k
views
Comment:
C: edgeR Gene Ontology Analysis always returns the same list of pathways
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
4.0k
views
Comment:
C: edgeR Gene Ontology Analysis always returns the same list of pathways
8.1 years ago by
GZ1995
▴ 410
1
vote
0
replies
3.9k
views
Answer:
C: RNA-Seq data distribution
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
2.9k
views
Comment:
C: Confused regarding the conflicting information on pre-processing RNA-seq
8.1 years ago by
GZ1995
▴ 410
0
votes
1
reply
4.0k
views
Comment:
C: edgeR Gene Ontology Analysis always returns the same list of pathways
8.1 years ago by
GZ1995
▴ 410
1
vote
1
reply
2.4k
views
Comment:
C: Convert fold changes of multiple transcripts of a given gene to a single value c
8.2 years ago by
GZ1995
▴ 410
4
votes
0
replies
7.0k
views
Answer:
A: RNA-seq normalization using housekeeping genes in EdgeR
8.2 years ago by
GZ1995
▴ 410
0
votes
1
reply
7.0k
views
Comment:
C: RNA-seq normalization using housekeeping genes in EdgeR
8.2 years ago by
GZ1995
▴ 410
0
votes
0
replies
8.9k
views
Comment:
C: How does edgeR do ERCC spike-in normalization?
8.2 years ago by
GZ1995
▴ 410
0
votes
1
reply
8.9k
views
Comment:
C: How does edgeR do ERCC spike-in normalization?
8.2 years ago by
GZ1995
▴ 410
1
vote
1
reply
8.9k
views
Answer:
A: How does edgeR do ERCC spike-in normalization?
8.2 years ago by
GZ1995
▴ 410
1
vote
0
replies
4.1k
views
Comment:
C: obtain RNA-seq read counts online
8.2 years ago by
GZ1995
▴ 410
3
votes
1
reply
4.1k
views
Comment:
C: obtain RNA-seq read counts online
8.2 years ago by
GZ1995
▴ 410
0
votes
1
reply
3.4k
views
Answer:
A: "featureCounts" of "subRead" does not work with ensembl.gft
8.2 years ago by
GZ1995
▴ 410
0
votes
1
reply
3.1k
views
Comment:
C: HTSeq result, most genes have 0 count?
8.5 years ago by
GZ1995
▴ 410
2
votes
1
reply
1.9k
views
Comment:
C: Microarray analysis--exprs has probe IDs, but the column has no "ID" designation
8.5 years ago by
GZ1995
▴ 410
4
votes
0
replies
5.6k
views
Answer:
A: Getting a Count Matrix from GEO for RNA-eq
8.5 years ago by
GZ1995
▴ 410
0
votes
0
replies
3.4k
views
Answer:
A: Paired-End read merging
8.5 years ago by
GZ1995
▴ 410
0
votes
1
reply
2.3k
views
Comment:
C: GEO study selection for analysis in R
8.5 years ago by
GZ1995
▴ 410
0
votes
1
reply
4.0k
views
Comment:
C: HT_HG-U133A_EA probe tab annotation file
8.5 years ago by
GZ1995
▴ 410
1
vote
2
replies
4.0k
views
Answer:
A: HT_HG-U133A_EA probe tab annotation file
8.5 years ago by
GZ1995
▴ 410
2
votes
1
reply
2.3k
views
Comment:
C: GEO study selection for analysis in R
8.5 years ago by
GZ1995
▴ 410
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