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0
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4.6k
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Comment: C: Get the longest transcript length of each gene from transcript fasta file
7.9 years ago by Farbod ★ 3.4k
0
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1
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1.2k
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Comment: C: Trapping sex specific SNPs from de novo transcriptome assembly: is it practical
7.9 years ago by Farbod ★ 3.4k
0
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0
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3.0k
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Comment: C: Tools for drawing and comparing linear diagram of amino acid sequences
7.9 years ago by Farbod ★ 3.4k
3
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3
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3.0k
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Tools for drawing and comparing linear diagram of amino acid sequences
gene sequence software
7.9 years ago by Farbod ★ 3.4k
0
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1
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1.2k
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Comment: C: Trapping sex specific SNPs from de novo transcriptome assembly: is it practical
7.9 years ago by Farbod ★ 3.4k
0
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1
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15k
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Comment: C: Plotting graphs using R - how to 'omit' specific values?
7.9 years ago by Farbod ★ 3.4k
3
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2
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2.7k
views
Forum: Game Theory: how to use it in RNA-seq DEG analysis
game-theory RNA-Seq DEG
updated 19 months ago by 44k • written 8.1 years ago by ★ 3.4k
1
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1
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2.6k
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Answer: A: Confusion regarding Trinity analyze_diff_expr.pl
7.9 years ago by Farbod ★ 3.4k
1
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0
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1.5k
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Comment: C: Bioinformatics Contest 2017
7.9 years ago by Farbod ★ 3.4k
0
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0
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1.3k
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Comment: C: using colorspace in d3heatmap
7.9 years ago by Farbod ★ 3.4k
1
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1
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4.8k
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Comment: C: install bioawk in unix system
7.9 years ago by Farbod ★ 3.4k
0
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0
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2.7k
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Answer: A: differential expression and meta analysis of microarray
7.9 years ago by Farbod ★ 3.4k
1
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0
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2.7k
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Answer: A: Trouble with installation Trinity on Linux 32 bit
7.9 years ago by Farbod ★ 3.4k
0
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1
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1.8k
views
Answer: A: filter genes based on statistical test
7.9 years ago by Farbod ★ 3.4k
1
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0
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2.5k
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Comment: C: The Gene Ontology Handbook (open access)
7.9 years ago by Farbod ★ 3.4k
1
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0
replies
4.8k
views
showing row names and dendrogram in same side, using heatmap() or pheatmap()
R software error
7.9 years ago by Farbod ★ 3.4k
0
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1
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3.9k
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Comment: C: Heatmap: how to just show significantly differentially expressed transcripts in
7.9 years ago by Farbod ★ 3.4k
0
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1
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3.9k
views
Comment: C: Heatmap: how to just show significantly differentially expressed transcripts in
8.0 years ago by Farbod ★ 3.4k
0
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1
reply
3.9k
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Comment: C: Heatmap: how to just show significantly differentially expressed transcripts in
8.0 years ago by Farbod ★ 3.4k
0
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1
reply
3.9k
views
Comment: C: Heatmap: how to just show significantly differentially expressed transcripts in
8.0 years ago by Farbod ★ 3.4k
1
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1
reply
1.7k
views
Answer: A: Finding foreign sequences in an NGS experiment
8.0 years ago by Farbod ★ 3.4k
0
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1
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3.9k
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Comment: C: Heatmap: how to just show significantly differentially expressed transcripts in
8.0 years ago by Farbod ★ 3.4k
7
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11
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3.9k
views
Heatmap: how to just show significantly differentially expressed transcripts in it ?
R RNA-Seq heatmap transcription factors
updated 8.0 years ago by ★ 4.7k • written 8.0 years ago by ★ 3.4k
0
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0
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5.1k
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Comment: C: can I get a heat map from two groups of transcriptome data?
8.0 years ago by Farbod ★ 3.4k
0
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0
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2.2k
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How to Construct TF-based regulation network using Cytoscape software
Cytoscape Transcription Factor network
8.0 years ago by Farbod ★ 3.4k
1
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1
reply
2.9k
views
Comment: C: transcriptome shotgun assembly annotation
8.0 years ago by Farbod ★ 3.4k
0
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1
reply
2.9k
views
Comment: C: transcriptome shotgun assembly annotation
8.0 years ago by Farbod ★ 3.4k
0
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0
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3.0k
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Comment: C: How to report differentially expressed transcription factors in scatter plot
8.0 years ago by Farbod ★ 3.4k
0
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1
reply
2.9k
views
Answer: A: transcriptome shotgun assembly annotation
8.0 years ago by Farbod ★ 3.4k
0
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1
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46k
views
Comment: C: Creating Interactive Volcano Plots with R and Plot.ly
8.0 years ago by Farbod ★ 3.4k
0
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1
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46k
views
Comment: C: Creating Interactive Volcano Plots with R and Plot.ly
8.0 years ago by Farbod ★ 3.4k
1
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5
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3.0k
views
How to report differentially expressed transcription factors in scatter plot
transcription factor RNA-Seq
8.0 years ago by Farbod ★ 3.4k
0
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1
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3.0k
views
Comment: C: How to report differentially expressed transcription factors in scatter plot
8.0 years ago by Farbod ★ 3.4k
0
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1
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3.0k
views
Comment: C: How to report differentially expressed transcription factors in scatter plot
8.0 years ago by Farbod ★ 3.4k
1
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1
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3.7k
views
Comment: C: downloaded sequence for miRNA that deposited in miRbase
8.0 years ago by Farbod ★ 3.4k
1
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1
reply
3.7k
views
Answer: A: downloaded sequence for miRNA that deposited in miRbase
8.0 years ago by Farbod ★ 3.4k
0
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1
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3.2k
views
Comment: C: Transcription factor discovery from RNA-seq data; Is it practical ?
8.0 years ago by Farbod ★ 3.4k
0
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1
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3.2k
views
Comment: C: Transcription factor discovery from RNA-seq data; Is it practical ?
8.0 years ago by Farbod ★ 3.4k
0
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2
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3.2k
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Comment: C: Transcription factor discovery from RNA-seq data; Is it practical ?
8.0 years ago by Farbod ★ 3.4k
6
votes
8
replies
3.2k
views
Transcription factor discovery from RNA-seq data; Is it practical ?
blast RNA-Seq transcription factor
updated 8.0 years ago by 104k • written 8.0 years ago by ★ 3.4k
0
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0
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1.3k
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Comment: C: Is there any tools for Ortholog hit ratio calculation ?
8.0 years ago by Farbod ★ 3.4k
0
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0
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2.8k
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Comment: C: Script to assess the transcriptome assembly quality in terms of blastx and tblas
8.0 years ago by Farbod ★ 3.4k
0
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0
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1.4k
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Comment: C: RNA-seq normalization issue
8.0 years ago by Farbod ★ 3.4k
0
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1
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1.3k
views
How to show the number of hits and the total number of each data-set protein in one graph?
blast bar chart
8.0 years ago by Farbod ★ 3.4k
2
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0
replies
3.3k
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Answer: A: INDEL detection tool recommendation
8.0 years ago by Farbod ★ 3.4k
0
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2
replies
3.4k
views
Comment: C: FastQC reults /probloms in loading
8.0 years ago by Farbod ★ 3.4k
0
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1
reply
2.6k
views
Answer: A: How to run blastp selectively against plants & fungi in blast2.5.0+?
8.0 years ago by Farbod ★ 3.4k
0
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1
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3.0k
views
Comment: C: How to convert XP_002531646.1 to sp|P05661|MYSA_DROME in Diamond blastX output
8.0 years ago by Farbod ★ 3.4k
0
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1
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3.0k
views
Comment: C: How to convert XP_002531646.1 to sp|P05661|MYSA_DROME in Diamond blastX output
8.0 years ago by Farbod ★ 3.4k
0
votes
1
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1.7k
views
Comment: C: collecting 50 most frequent proteins from tabular blastX result
8.0 years ago by Farbod ★ 3.4k
583 results • Page 4 of 12
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