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Comment: Comment: Transposon_ annotation
2.5 years ago by liorglic ★ 1.5k
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1.5k
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Comment: Comment: unique k-mers
2.5 years ago by liorglic ★ 1.5k
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1
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9.6k
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Comment: Comment: Repeat masked gtf files from ensembl
2.5 years ago by liorglic ★ 1.5k
3
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1
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758
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Quickly examining many MSAs
MSA
updated 2.6 years ago by ★ 2.1k • written 2.6 years ago by ★ 1.5k
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1.8k
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Comment: Comment: Reciprocal (Multiple-way) Best BLAST Hits
2.6 years ago by liorglic ★ 1.5k
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1
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1.8k
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Comment: Comment: Multiple-way Reciprocal Best BLAST Hits
2.6 years ago by liorglic ★ 1.5k
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0
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2.0k
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Comment: Comment: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
2.6 years ago by liorglic ★ 1.5k
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0
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2.0k
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Comment: Comment: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
2.6 years ago by liorglic ★ 1.5k
1
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1
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2.0k
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Answer: Answer: Increased proportion of heterozygous SNPs when RNAseq reads are mapped against
updated 16 months ago by 45k • written 2.6 years ago by ★ 1.5k
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2
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5.3k
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Comment: Comment: Why we use adjusted p-value not p-value in differential gene expression analysis
2.6 years ago by liorglic ★ 1.5k
2
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1
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4.1k
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Comment: Comment: IGV visualization pattern for RNA-Seq mapping
2.6 years ago by liorglic ★ 1.5k
1
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0
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3.6k
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Answer: Answer: FASTA to GTF/GFF using reference genome
2.6 years ago by liorglic ★ 1.5k
1
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1
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1.9k
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Comment: Comment: Improving existing genome with new RNA-seq data
2.6 years ago by liorglic ★ 1.5k
1
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0
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1.5k
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Answer: Answer: Remove part of a header in a fasta file
2.6 years ago by liorglic ★ 1.5k
1
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1
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4.1k
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Comment: Comment: IGV visualization pattern for RNA-Seq mapping
2.6 years ago by liorglic ★ 1.5k
1
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1
reply
1.9k
views
Comment: Comment: Improving existing genome with new RNA-seq data
2.6 years ago by liorglic ★ 1.5k
1
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0
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1.0k
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Answer: Answer: Find mate reads in two different pair-end reads files.
2.6 years ago by liorglic ★ 1.5k
2
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0
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1.6k
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Answer: Answer: align kmers to reference genome
2.7 years ago by liorglic ★ 1.5k
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1
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3.1k
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Comment: Comment: Antismash on Fasta files
2.7 years ago by liorglic ★ 1.5k
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0
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2.5k
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Comment: Comment: Tool for extracting part of aligned sequence by CIGAR string
2.7 years ago by liorglic ★ 1.5k
0
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1
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1.7k
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Comment: Comment: In GWAS Analysis, my top most significant SNPs from pre-imputation data does not
2.7 years ago by liorglic ★ 1.5k
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0
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3.1k
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Comment: Comment: How can i find longest sequence in fasta file on terminal
2.8 years ago by liorglic ★ 1.5k
0
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1
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3.7k
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Comment: Comment: fast way to get last position in a large indexed VCF?
2.8 years ago by liorglic ★ 1.5k
2
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0
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1.7k
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Answer: Answer: augustus gene prediction
2.8 years ago by liorglic ★ 1.5k
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0
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964
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Comment: Comment: Construct a phylogenetic tree of apes
2.8 years ago by liorglic ★ 1.5k
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1
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964
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Comment: Comment: Construct a phylogenetic tree of apes
2.8 years ago by liorglic ★ 1.5k
0
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1
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3.4k
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Comment: Comment: augustus installation with conda
2.8 years ago by liorglic ★ 1.5k
0
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1
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3.1k
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Answer: Answer: How can i find longest sequence in fasta file on terminal
2.8 years ago by liorglic ★ 1.5k
1
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1
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2.1k
views
Comment: Comment: Extract paired-end reads with one end falls within a given region from a bam fil
2.8 years ago by liorglic ★ 1.5k
8
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13
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4.7k
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8 follow
Forum: Commercial software for genomics / NGS / bioinformatics
NGS software genomics
updated 2.8 years ago by • 0 • written 2.8 years ago by ★ 1.5k
0
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1
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4.7k
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Comment: Comment: Commercial software for genomics / NGS / bioinformatics
2.8 years ago by liorglic ★ 1.5k
0
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2
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4.7k
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Comment: Comment: Commercial software for genomics / NGS / bioinformatics
2.8 years ago by liorglic ★ 1.5k
0
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0
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1.3k
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Comment: Comment: SNP calling from plant whole genome assemblies
2.9 years ago by liorglic ★ 1.5k
0
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2
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1.3k
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SNP calling from plant whole genome assemblies
calling snp whole assembly genome
2.9 years ago by liorglic ★ 1.5k
1
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0
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3.3k
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Comment: Comment: convert csv to fasta format using python
3.1 years ago by liorglic ★ 1.5k
0
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1
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946
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Comment: Comment: URGENT : GC @5,20,50 : Fraction of GC content in the bases around the variant po
3.1 years ago by liorglic ★ 1.5k
2
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1
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3.3k
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Answer: Answer: How to create a phylogenetic tree from 30 VCF files
3.1 years ago by liorglic ★ 1.5k
0
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0
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1.0k
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Comment: Comment: Sort the fasta sequences based on the desired amino acid content
3.2 years ago by liorglic ★ 1.5k
1
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1
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1.2k
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Comment: Comment: Is it possible to create a phylogenetic tree based on 10 proteins per organism
3.2 years ago by liorglic ★ 1.5k
0
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1
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4.2k
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Answer: Answer: How to merge the annotation from different softwares?
3.2 years ago by liorglic ★ 1.5k
0
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1
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1.2k
views
Comment: Comment: Is it possible to create a phylogenetic tree based on 10 proteins per organism
3.2 years ago by liorglic ★ 1.5k
0
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0
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825
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Comment: Comment: Over view informations about my genomes
3.2 years ago by liorglic ★ 1.5k
4
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0
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3.7k
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Answer: Answer: Build Phylogenetic Tree from SNPs
3.2 years ago by liorglic ★ 1.5k
0
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0
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1.6k
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Comment: Comment: vg for gene presence-absence analysis
3.2 years ago by liorglic ★ 1.5k
0
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2
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1.6k
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vg for gene presence-absence analysis
vg pan-genome vgteam PAV graph variation
3.2 years ago by liorglic ★ 1.5k
2
votes
2
replies
1.5k
views
Unable to parse Open Tree of Life Newick with ete3 (python)
newick python ete3
updated 3.2 years ago by 22k • written 3.2 years ago by ★ 1.5k
1
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0
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1.5k
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Answer: Answer: Unable to parse Open Tree of Life Newick with ete3 (python)
3.2 years ago by liorglic ★ 1.5k
0
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1
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996
views
Comment: Comment: DGE - command line alternatives to R packages?
3.3 years ago by liorglic ★ 1.5k
0
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4
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996
views
DGE - command line alternatives to R packages?
DGE CLI RNA-seq R
updated 3.3 years ago by 4.7k • written 3.3 years ago by ★ 1.5k
1
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2
replies
870
views
Running Galaxy tools on a HPC cluster using CLI?
galaxy HPC
updated 3.3 years ago by ★ 2.1k • written 3.3 years ago by ★ 1.5k
284 results • Page 2 of 6
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