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962
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Answer: Answer: 50% Missed exons when trying to replicate annotation reference
2.9 years ago by liorglic ★ 1.4k
1
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1
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1.7k
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Answer: Answer: Best practice for RNA-Seq aligned sequences data for visualization via IGV
2.9 years ago by liorglic ★ 1.4k
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0
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1.0k
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Answer: Answer: Using Minimap2 with FMLRC2
2.9 years ago by liorglic ★ 1.4k
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0
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1.4k
views
Answer: Answer: Using samtools faidx with a large list of genomic loci
2.9 years ago by liorglic ★ 1.4k
1
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1
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628
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Comment: Comment: Are RFLP and ITS both molecular markers?
2.9 years ago by liorglic ★ 1.4k
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0
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2.5k
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Comment: Comment: Snakemake command line arguments
2.9 years ago by liorglic ★ 1.4k
0
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0
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707
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Comment: Comment: Count number of values in a nested dictionary
2.9 years ago by liorglic ★ 1.4k
1
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0
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791
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Answer: Answer: Mapping genes from VCF by exclusively using python
2.9 years ago by liorglic ★ 1.4k
0
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1
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1.3k
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Comment: Comment: asterisk in phylip file
2.9 years ago by liorglic ★ 1.4k
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0
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644
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Comment: Comment: Genome variants - regional distribution analysis
2.9 years ago by liorglic ★ 1.4k
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0
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2.2k
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Answer: Answer: Modern processing of VCF files in Python
2.9 years ago by liorglic ★ 1.4k
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0
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1.2k
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Comment: Comment: Is there a way to change only the header of a fasta file?
2.9 years ago by liorglic ★ 1.4k
1
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1
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1.2k
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Comment: Comment: Is there a way to change only the header of a fasta file?
2.9 years ago by liorglic ★ 1.4k
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0
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1.7k
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Comment: Comment: Generating Depth of Coverage files from vcf.
2.9 years ago by liorglic ★ 1.4k
0
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0
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566
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Better assembly results with lower depth !?
megahit assembly
2.9 years ago by liorglic ★ 1.4k
0
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1
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1.9k
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Comment: Comment: How to plot depth coverage plot?
3.0 years ago by liorglic ★ 1.4k
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0
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1.0k
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Comment: Comment: BAM - number of mapping positions per read
3.0 years ago by liorglic ★ 1.4k
1
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3
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1.0k
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BAM - number of mapping positions per read
sam bwa bowtie bam
3.0 years ago by liorglic ★ 1.4k
1
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2
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2.5k
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Answer: Answer: file size of pair-end sequencing fastq
3.0 years ago by liorglic ★ 1.4k
0
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1
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1.1k
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Comment: Comment: Script for chromosome features
3.0 years ago by liorglic ★ 1.4k
0
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1
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4.0k
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Comment: Comment: Simplify annotation file by collapsing gene isoforms into a single annotation pe
3.0 years ago by liorglic ★ 1.4k
0
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0
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994
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Comment: Comment: Presence absence matrix from blast results
3.0 years ago by liorglic ★ 1.4k
0
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1
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1.1k
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Comment: Comment: Script for chromosome features
3.0 years ago by liorglic ★ 1.4k
2
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1
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4.0k
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Answer: Answer: Simplify annotation file by collapsing gene isoforms into a single annotation pe
3.0 years ago by liorglic ★ 1.4k
1
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1
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1.5k
views
Using Aspera to download from GSA (BIG)
Aspera GSA
updated 20 months ago by 44k • written 4.0 years ago by ★ 1.4k
1
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0
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1.5k
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Answer: Answer: Using Aspera to download from GSA (BIG)
3.1 years ago by liorglic ★ 1.4k
1
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0
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735
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Answer: Answer: extract entire header from BED file to FASTA
3.3 years ago by liorglic ★ 1.4k
0
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1
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738
views
Using protein domains for annotation validation
Interpro annotation domain InterproScan
updated 3.3 years ago by 27k • written 3.3 years ago by ★ 1.4k
0
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0
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2.0k
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Comment: Comment: Weird characters in yeast reference gff3
3.4 years ago by liorglic ★ 1.4k
2
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5
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2.0k
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Weird characters in yeast reference gff3
SGD gff3 yeast gff
3.4 years ago by liorglic ★ 1.4k
0
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0
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1.1k
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Answer: Answer: Histogram of Paired End Fragment Lengths
3.4 years ago by liorglic ★ 1.4k
0
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1
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3.7k
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Comment: Comment: Snakemake error: "Removing output files of failed job since they might be corru
3.4 years ago by liorglic ★ 1.4k
1
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1
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633
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Comment: Comment: how to splice a gene sequence
3.4 years ago by liorglic ★ 1.4k
0
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0
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714
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Comment: Comment: De Novo Assembly from Oligos
3.4 years ago by liorglic ★ 1.4k
3
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1
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1.8k
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Comment: Comment: Download multiple SRA samples and convert into fasta format at once
3.4 years ago by liorglic ★ 1.4k
1
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0
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1.2k
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Comment: Comment: Get read id's from .sam file
3.4 years ago by liorglic ★ 1.4k
0
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1
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975
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Answer: Answer: Snakefile - problem with too many outputs
3.4 years ago by liorglic ★ 1.4k
3
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11
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1.9k
views
Simple genome annotation using transcripts data
annotation fasta gff
updated 3.5 years ago by ▴ 50 • written 4.4 years ago by ★ 1.4k
0
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0
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511
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How to handle mis-annotated chimeric genes?
chimeric MAKER curation annotation
3.6 years ago by liorglic ★ 1.4k
3
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6
replies
4.3k
views
Is the ENSEMBL FTP down?
ensembl ftp
updated 3.2 years ago by ▴ 920 • written 3.7 years ago by ★ 1.4k
0
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0
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4.3k
views
Comment: A: Is the ENSEMBL FTP down?
3.7 years ago by liorglic ★ 1.4k
1
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10
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5.9k
views
6 follow
IGV memory on Windows
igv gff
updated 3.9 years ago by ▴ 10 • written 4.6 years ago by ★ 1.4k
0
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0
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582
views
Comment: C: Minia assembler _ header information
4.0 years ago by liorglic ★ 1.4k
1
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2
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1.4k
views
Is ENA API down?
ena
4.0 years ago by liorglic ★ 1.4k
1
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0
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1.4k
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Answer: A: Is ENA API down?
4.0 years ago by liorglic ★ 1.4k
0
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1
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1.2k
views
Answer: A: Alignng RNAseq data for gene prediction
4.2 years ago by liorglic ★ 1.4k
0
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1
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5.2k
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Comment: C: Reference-guided assembly from short reads
4.2 years ago by liorglic ★ 1.4k
0
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0
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1.9k
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Answer: A: Why does Maker-P output Match-part?
4.3 years ago by liorglic ★ 1.4k
0
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0
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1.9k
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Comment: C: Why does Maker-P output Match-part?
4.3 years ago by liorglic ★ 1.4k
0
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0
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1.4k
views
Comment: C: blastn much slower on longer subject sequences?
4.3 years ago by liorglic ★ 1.4k
284 results • Page 4 of 6
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