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questions
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answers
comments
2
votes
4
replies
1.7k
views
How to handle paralogs in pan-genomes?
orthologs
paralogs
pan-genome
4.9 years ago by
liorglic
★ 1.4k
0
votes
2
replies
851
views
Assigning proteins to pre-computed gene families
gene family
Ensembl
Phytozome
updated 4.9 years ago by
Mensur Dlakic
★ 28k • written 5.0 years ago by
liorglic
★ 1.4k
1
vote
7
replies
1.7k
views
QUAST ignoring bam files
QUAST
5.0 years ago by
liorglic
★ 1.4k
1
vote
0
replies
1.7k
views
Answer:
A: QUAST ignoring bam files
5.0 years ago by
liorglic
★ 1.4k
0
votes
0
replies
1.7k
views
Comment:
C: QUAST ignoring bam files
5.0 years ago by
liorglic
★ 1.4k
0
votes
1
reply
1.7k
views
Comment:
C: QUAST ignoring bam files
5.0 years ago by
liorglic
★ 1.4k
0
votes
1
reply
1.7k
views
Comment:
C: QUAST ignoring bam files
5.0 years ago by
liorglic
★ 1.4k
5
votes
1
reply
2.4k
views
Answer:
A: Removing small contigs from fasta files
5.0 years ago by
liorglic
★ 1.4k
2
votes
0
replies
855
views
Comment:
C: Working With Large *.Bam Files
5.0 years ago by
liorglic
★ 1.4k
0
votes
1
reply
1.5k
views
Comment:
C: How to group genes in a single genome into gene families?
5.0 years ago by
liorglic
★ 1.4k
2
votes
3
replies
1.5k
views
How to group genes in a single genome into gene families?
gene family
updated 5.0 years ago by
Renesh
★ 2.2k • written 5.0 years ago by
liorglic
★ 1.4k
0
votes
1
reply
794
views
Inference of gene content evolution within a phylogeny
gene
updated 5.2 years ago by
andres.firrincieli
3.8k • written 5.2 years ago by
liorglic
★ 1.4k
2
votes
4
replies
2.1k
views
A software tool for gene copy number and loss detection
genome
updated 5.3 years ago by
Costadia
▴ 10 • written 5.3 years ago by
liorglic
★ 1.4k
0
votes
0
replies
2.1k
views
Comment:
C: A software tool for gene copy number and loss detection
5.3 years ago by
liorglic
★ 1.4k
0
votes
2
replies
5.2k
views
Comment:
C: Reference-guided assembly from short reads
5.6 years ago by
liorglic
★ 1.4k
2
votes
6
replies
5.2k
views
Reference-guided assembly from short reads
assembly
ngs
5.6 years ago by
liorglic
★ 1.4k
0
votes
1
reply
1.8k
views
Answer:
A: What's the right way to submit a genome assembly to NCBI?
5.9 years ago by
liorglic
★ 1.4k
3
votes
3
replies
1.8k
views
What's the right way to submit a genome assembly to NCBI?
Assembly
5.9 years ago by
liorglic
★ 1.4k
0
votes
0
replies
4.4k
views
Comment:
C: Merging multiple sets of transcripts (generated by Trinity)
6.4 years ago by
liorglic
★ 1.4k
0
votes
1
reply
4.4k
views
Comment:
C: Merging multiple sets of transcripts (generated by Trinity)
6.4 years ago by
liorglic
★ 1.4k
1
vote
5
replies
4.4k
views
Merging multiple sets of transcripts (generated by Trinity)
Assembly
RNA-Seq
6.4 years ago by
liorglic
★ 1.4k
0
votes
3
replies
1.9k
views
extract one-side unmapped reads from sam
sam
bam
samtools
tophat
updated 6.5 years ago by
Carlo Yague
8.9k • written 6.5 years ago by
liorglic
★ 1.4k
0
votes
0
replies
2.4k
views
cDNA/EST/Random library selection for transcriptome assembly
RNA-Seq
cDNA
EST
sequencing
assembly
6.6 years ago by
liorglic
★ 1.4k
0
votes
1
reply
2.1k
views
Comment:
C: RNA-seq data for de-novo transcript assembly
6.7 years ago by
liorglic
★ 1.4k
0
votes
1
reply
2.1k
views
Comment:
C: RNA-seq data for de-novo transcript assembly
6.7 years ago by
liorglic
★ 1.4k
0
votes
1
reply
2.1k
views
Comment:
C: RNA-seq data for de-novo transcript assembly
6.7 years ago by
liorglic
★ 1.4k
3
votes
8
replies
2.1k
views
RNA-seq data for de-novo transcript assembly
rna
RNA-Seq
rna-seq
Assembly
assembly
updated 6.7 years ago by
lieven.sterck
15k • written 6.7 years ago by
liorglic
★ 1.4k
1
vote
3
replies
1.4k
views
Strategy for genome annotation for a new individual of a well-established species
Assembly
annotation
transcriptome
updated 6.7 years ago by
Rohit
★ 1.5k • written 6.7 years ago by
liorglic
★ 1.4k
0
votes
0
replies
1.4k
views
Comment:
C: Strategy for genome annotation for a new individual of a well-established specie
6.7 years ago by
liorglic
★ 1.4k
3
votes
4
replies
2.9k
views
Gene copies vs. gene paralogs - what's the difference
CNV
paralogs
WGS
updated 6.9 years ago by
Emily
24k • written 6.9 years ago by
liorglic
★ 1.4k
1
vote
1
reply
1.7k
views
Genome annotation tools - current status. Machine learning?
genome
Assembly
annotation
machine learning
updated 7.9 years ago by
prash
▴ 10 • written 7.9 years ago by
liorglic
★ 1.4k
5
votes
3
replies
7.4k
views
Where can I find a small NGS raw data set?
NGS
sequencing
fastq
phage
updated 8.2 years ago by
Medhat
9.8k • written 8.2 years ago by
liorglic
★ 1.4k
3
votes
4
replies
6.6k
views
Pysam (python) problem parsing BAM reference id
bam
sam
python
pysam
updated 8.6 years ago by
Matt Shirley
10k • written 8.6 years ago by
liorglic
★ 1.4k
0
votes
0
replies
6.6k
views
Comment:
C: Pysam (python) problem parsing BAM reference id
8.6 years ago by
liorglic
★ 1.4k
284 results • Page
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