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385
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Estimating divergence from EPO ancestral sequences in primates
EPO alignment divergence mutation primate
2.4 years ago by spiral01 ▴ 110
1
vote
6
replies
4.9k
views
6 follow
Calculating Tajima's D from vcf data using bed files
SNP
updated 3 months ago by • 0 • written 6.9 years ago by ▴ 110
4
votes
8
replies
2.5k
views
Combining vcf files so that same loci data is combined
SNP
written 7.0 years ago by ▴ 110
2
votes
4
replies
3.6k
views
Set ancestral alleles to upper case in vcf file
SNP
updated 3.1 years ago by • 0 • written 6.7 years ago by ▴ 110
3
votes
11
replies
14k
views
Writing vcf file headers
SNP vcf
updated 4.2 years ago by ▴ 40 • written 6.8 years ago by ▴ 110
0
votes
1
reply
704
views
Masking selected sites in human genome
Assembly genome mask
4.4 years ago by spiral01 ▴ 110
0
votes
1
reply
1.0k
views
Comment: C: Removing GC dinucleotides from a sequence
4.7 years ago by spiral01 ▴ 110
0
votes
3
replies
1.0k
views
Removing GC dinucleotides from a sequence
SNP alignment sequence gene
4.7 years ago by spiral01 ▴ 110
2
votes
2
replies
1.4k
views
Problems when installing Grapes and Bio++ tools
software error
5.3 years ago by spiral01 ▴ 110
1
vote
1
reply
1.4k
views
Answer: A: Problems when installing Grapes and Bio++ tools
5.3 years ago by spiral01 ▴ 110
0
votes
1
reply
2.1k
views
Comment: C: Bioawk - using bash variables
5.4 years ago by spiral01 ▴ 110
1
vote
3
replies
2.1k
views
Bioawk - using bash variables
awk software error
updated 5.4 years ago by ★ 2.2k • written 5.4 years ago by ▴ 110
0
votes
1
reply
1.6k
views
.axt formats for pairwise alignments and how to convert to paml
alignment
updated 5.4 years ago by 20 • written 5.5 years ago by ▴ 110
0
votes
0
replies
1.9k
views
Comment: C: 1000 genomes coding SNPs not in exonic regions?
5.8 years ago by spiral01 ▴ 110
0
votes
1
reply
1.9k
views
Comment: C: 1000 genomes coding SNPs not in exonic regions?
5.8 years ago by spiral01 ▴ 110
0
votes
1
reply
1.9k
views
Comment: C: 1000 genomes coding SNPs not in exonic regions?
5.8 years ago by spiral01 ▴ 110
0
votes
0
replies
1.9k
views
Comment: C: 1000 genomes coding SNPs not in exonic regions?
5.8 years ago by spiral01 ▴ 110
0
votes
1
reply
1.9k
views
Comment: C: 1000 genomes coding SNPs not in exonic regions?
5.8 years ago by spiral01 ▴ 110
7
votes
12
replies
1.9k
views
1000 genomes coding SNPs not in exonic regions?
SNP
5.8 years ago by spiral01 ▴ 110
0
votes
0
replies
686
views
simulating slightly deleterious mutations in humans using a gamma distribution
snp
6.1 years ago by spiral01 ▴ 110
0
votes
0
replies
2.6k
views
Selscan error: Variant physical position must be strictly increasing.
SNP selscan map
6.7 years ago by spiral01 ▴ 110
1
vote
0
replies
1.3k
views
Answer: A: vcflib GPAT++: How to select all individuals as targets?
6.7 years ago by spiral01 ▴ 110
1
vote
1
reply
1.3k
views
vcflib GPAT++: How to select all individuals as targets?
SNP vcf vcflib GPAT++
6.7 years ago by spiral01 ▴ 110
0
votes
0
replies
3.6k
views
Comment: C: Set ancestral alleles to upper case in vcf file
6.7 years ago by spiral01 ▴ 110
2
votes
1
reply
2.1k
views
Extract all genotype counts from phased data in vcf files
vcf SNP
updated 6.7 years ago by 164k • written 6.7 years ago by ▴ 110
0
votes
0
replies
14k
views
Comment: C: Writing vcf file headers
6.8 years ago by spiral01 ▴ 110
0
votes
1
reply
14k
views
Comment: C: Writing vcf file headers
6.8 years ago by spiral01 ▴ 110
0
votes
0
replies
14k
views
Comment: C: Writing vcf file headers
6.8 years ago by spiral01 ▴ 110
0
votes
1
reply
14k
views
Comment: C: Writing vcf file headers
6.8 years ago by spiral01 ▴ 110
0
votes
1
reply
14k
views
Comment: C: Writing vcf file headers
6.8 years ago by spiral01 ▴ 110
3
votes
1
reply
1.7k
views
Number of individuals in 1000genomes superpopulations?
SNP
updated 6.8 years ago by ★ 1.9k • written 6.8 years ago by ▴ 110
0
votes
0
replies
963
views
ensembl Chimpanzee variants - No frequency or GT info?
SNP
6.9 years ago by spiral01 ▴ 110
0
votes
0
replies
1.3k
views
popfly drosophila database: vcf files with N alleles
SNP
6.9 years ago by spiral01 ▴ 110
1
vote
0
replies
2.8k
views
Comment: C: counting number of variants within specified windows
6.9 years ago by spiral01 ▴ 110
9
votes
11
replies
2.8k
views
counting number of variants within specified windows
SNP genome
updated 6.9 years ago by 21k • written 6.9 years ago by ▴ 110
0
votes
0
replies
2.8k
views
Comment: C: counting number of variants within specified windows
6.9 years ago by spiral01 ▴ 110
0
votes
0
replies
1.6k
views
Answer: A: Creating bed files for consecutive genomic windows out from polymorphisms
6.9 years ago by spiral01 ▴ 110
0
votes
1
reply
1.6k
views
Creating bed files for consecutive genomic windows out from polymorphisms
SNP
6.9 years ago by spiral01 ▴ 110
0
votes
0
replies
6.4k
views
Comment: C: bedtools window - killed: 9 error
6.9 years ago by spiral01 ▴ 110
0
votes
1
reply
6.4k
views
Comment: C: bedtools window - killed: 9 error
6.9 years ago by spiral01 ▴ 110
0
votes
1
reply
6.4k
views
Comment: C: bedtools window - killed: 9 error
7.0 years ago by spiral01 ▴ 110
0
votes
1
reply
6.4k
views
Comment: C: bedtools window - killed: 9 error
7.0 years ago by spiral01 ▴ 110
4
votes
9
replies
6.4k
views
bedtools window - killed: 9 error
SNP
updated 7.0 years ago by 36k • written 7.0 years ago by ▴ 110
0
votes
1
reply
4.8k
views
Comment: C: vcf files: counting number of variants in genomic windows of chosen size
7.0 years ago by spiral01 ▴ 110
0
votes
0
replies
17k
views
Comment: C: Plotting SNP density along a chromosome from VCF files
7.0 years ago by spiral01 ▴ 110
2
votes
5
replies
4.8k
views
vcf files: counting number of variants in genomic windows of chosen size
SNP
updated 7.0 years ago by 36k • written 7.0 years ago by ▴ 110
0
votes
0
replies
4.8k
views
Comment: C: vcf files: counting number of variants in genomic windows of chosen size
7.0 years ago by spiral01 ▴ 110
0
votes
1
reply
2.5k
views
Answer: A: Combining vcf files so that same loci data is combined
7.0 years ago by spiral01 ▴ 110
1
vote
11
replies
2.2k
views
Discrepencies between ANNOVAR and Gencode annotations of 1000 genomes
SNP 1000genomes annotation
updated 7.0 years ago by 20 • written 7.1 years ago by ▴ 110
0
votes
1
reply
2.5k
views
Comment: C: Combining vcf files so that same loci data is combined
7.0 years ago by spiral01 ▴ 110
99 results • Page 1 of 2
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