Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
4.5k
views
Comment: C: error correction using BBTools
7.2 years ago by Anand Rao ▴ 640
0
votes
0
replies
1.4k
views
Comment: C: a5pipeline.pl run error
7.2 years ago by Anand Rao ▴ 640
0
votes
2
replies
1.4k
views
a5pipeline.pl run error
a5_pipeline.pl run error phred encoding
7.2 years ago by Anand Rao ▴ 640
0
votes
0
replies
2.4k
views
Comment: C: ALLPATHS-LG error correction step problem
7.2 years ago by Anand Rao ▴ 640
0
votes
0
replies
1.3k
views
Aligning gene sequences
Splice-aware Gene alignment Exon-Intron boundary
7.2 years ago by Anand Rao ▴ 640
0
votes
2
replies
3.3k
views
Comment: C: Additional sequences in adapter file cause trimming problem?
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
3.3k
views
Comment: C: Additional sequences in adapter file cause trimming problem?
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
5.2k
views
Comment: C: SPAdes assembler k-mer > default 127 possible?
7.3 years ago by Anand Rao ▴ 640
0
votes
0
replies
3.3k
views
Comment: C: Additional sequences in adapter file cause trimming problem?
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
3.3k
views
Comment: C: Additional sequences in adapter file cause trimming problem?
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
3.3k
views
Comment: C: Additional sequences in adapter file cause trimming problem?
7.3 years ago by Anand Rao ▴ 640
8
votes
12
replies
3.3k
views
Additional sequences in adapter file cause trimming problem?
adapter trimming trimmomatic bbtools
7.3 years ago by Anand Rao ▴ 640
6
votes
1
reply
3.5k
views
Running ABySS at k-mer > 97
genome assembly ABySS k-mer
updated 7.3 years ago by ▴ 730 • written 7.3 years ago by ▴ 640
0
votes
1
reply
2.4k
views
Comment: C: ALLPATHS-LG error correction step problem
7.3 years ago by Anand Rao ▴ 640
0
votes
0
replies
2.4k
views
Comment: C: ALLPATHS-LG error correction step problem
7.3 years ago by Anand Rao ▴ 640
1
vote
5
replies
2.4k
views
ALLPATHS-LG error correction step problem
ALLPATHS-LG error correction ErrorCorrectReads.pl
7.3 years ago by Anand Rao ▴ 640
0
votes
0
replies
3.3k
views
Comment: C: ABySS run problems
7.3 years ago by Anand Rao ▴ 640
0
votes
0
replies
5.3k
views
Comment: C: Increasing kmer limit in SPAdes
7.3 years ago by Anand Rao ▴ 640
0
votes
0
replies
4.5k
views
Comment: C: error correction using BBTools
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
4.5k
views
Comment: C: error correction using BBTools
7.3 years ago by Anand Rao ▴ 640
6
votes
8
replies
4.5k
views
error correction using BBTools
error correction k-mer BBTools bbnorm khist
updated 7.3 years ago by 20k • written 7.3 years ago by ▴ 640
0
votes
1
reply
6.5k
views
Comment: C: HiSeq 4000 PhiX screening and removal using bbduk
7.3 years ago by Anand Rao ▴ 640
0
votes
2
replies
6.5k
views
Comment: C: HiSeq 4000 PhiX screening and removal using bbduk
7.3 years ago by Anand Rao ▴ 640
0
votes
0
replies
6.5k
views
Comment: C: HiSeq 4000 PhiX screening and removal using bbduk
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
6.5k
views
Comment: C: HiSeq 4000 PhiX screening and removal using bbduk
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
6.5k
views
Comment: C: HiSeq 4000 PhiX screening and removal using bbduk
7.3 years ago by Anand Rao ▴ 640
0
votes
3
replies
6.5k
views
Comment: A: HiSeq 4000 PhiX screening and removal using bbduk
7.3 years ago by Anand Rao ▴ 640
20
votes
17
replies
6.5k
views
HiSeq 4000 PhiX screening and removal using bbduk
spikein filtering bbmap bbduk phix
7.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
3.3k
views
Comment: C: ABySS run problems
7.3 years ago by Anand Rao ▴ 640
4
votes
6
replies
3.3k
views
ABySS run problems
ABySS genome assembly de novo MPI
updated 7.3 years ago by ▴ 730 • written 7.3 years ago by ▴ 640
0
votes
1
reply
2.5k
views
k-mer overrepresentation of WGS Illumina reads
Adapter Trimming k-mer Trimmomatic FastQC
7.3 years ago by Anand Rao ▴ 640
8
votes
3
replies
3.9k
views
Genome size estimation discrepancy : Jellyfish k-mer Vs. estimate_genome_size.pl
k-mer jellyfish genome size
updated 7.3 years ago by 20k • written 7.4 years ago by ▴ 640
3
votes
1
reply
3.9k
views
Answer: A: Genome size estimation discrepancy : Jellyfish k-mer Vs. estimate_genome_size.pl
7.3 years ago by Anand Rao ▴ 640
0
votes
2
replies
5.5k
views
Comment: C: Interpreting pre- and post-trim_galore FastQC results
7.4 years ago by Anand Rao ▴ 640
5
votes
4
replies
5.5k
views
Interpreting pre- and post-trim_galore FastQC results
fastqc illumina adapter trimming
updated 7.4 years ago by 147k • written 7.4 years ago by ▴ 640
3
votes
1
reply
3.5k
views
RNAmmer returns 8s_rRNA, which is what?
RNAmmer rRNA gene prediction gene annotation
updated 7.5 years ago by 35k • written 7.5 years ago by ▴ 640
0
votes
1
reply
1.6k
views
Comment: C: Maintaining gene ID correspondence across strains
7.5 years ago by Anand Rao ▴ 640
0
votes
3
replies
1.6k
views
Maintaining gene ID correspondence across strains
Gene prediction Gene annotation Gene ID
updated 7.5 years ago by 27k • written 7.5 years ago by ▴ 640
0
votes
1
reply
4.3k
views
Comment: C: Fasta alignment to Tajima's D and population statistics
7.5 years ago by Anand Rao ▴ 640
0
votes
1
reply
1.3k
views
Scaffolder with better performance specs
scaffolding genome assembly assembly improvement
7.7 years ago by Anand Rao ▴ 640
0
votes
0
replies
2.5k
views
Comment: C: structural variants in de novo genome assemblies
8.3 years ago by Anand Rao ▴ 640
0
votes
2
replies
2.5k
views
structural variants in de novo genome assemblies
sv cnv de novo assembly
updated 8.3 years ago by 47k • written 8.3 years ago by ▴ 640
0
votes
1
reply
5.0k
views
Comment: C: map gene gain loss on species tree
8.3 years ago by Anand Rao ▴ 640
0
votes
1
reply
4.5k
views
Comment: C: Combining HMMs and fasta for HMMER searches
8.3 years ago by Anand Rao ▴ 640
2
votes
4
replies
4.5k
views
Combining HMMs and fasta for HMMER searches
HMMER fasta hmm
updated 8.3 years ago by 27k • written 8.3 years ago by ▴ 640
0
votes
1
reply
1.6k
views
Comment: C: probability of 2 sequences with defined distance in fully sequenced genomes
8.4 years ago by Anand Rao ▴ 640
0
votes
3
replies
1.6k
views
probability of 2 sequences with defined distance in fully sequenced genomes
DNA sequence probability E-value p-value
updated 8.4 years ago by ▴ 10 • written 8.4 years ago by ▴ 640
0
votes
0
replies
3.9k
views
Comment: C: tools for Reciprocal BLAST hit processing
8.6 years ago by Anand Rao ▴ 640
2
votes
2
replies
3.9k
views
tools for Reciprocal BLAST hit processing
reciprocal BLAST script filter
8.6 years ago by Anand Rao ▴ 640
7
votes
3
replies
3.3k
views
Map PDB match coords to Pfam protein domain
protein PDB mapping domain
updated 3.7 years ago by 44k • written 9.0 years ago by ▴ 640
215 results • Page 4 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6