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18
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Forum: The Evolution of NGS: What’s New and What’s Next?
ngs
updated 9 weeks ago by 148k • written 10 weeks ago by 5.9k
1
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0
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1.4k
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Answer: Answer: Tower Server configuration for NGS data analysis
10 months ago by lakhujanivijay 5.9k
0
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0
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1.7k
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Comment: Comment: Extract paired-end reads with one end falls within a given region from a bam fil
19 months ago by lakhujanivijay 5.9k
1
vote
7
replies
3.0k
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How to increase the speed of miRanda target prediction program?
miranada mirna parallel
updated 21 months ago by ▴ 30 • written 7.1 years ago by 5.9k
16
votes
4
replies
8.3k
views
Samtools flagstat number of reads do not match actual total number of reads.
flagstat samtools
updated 21 months ago by 44k • written 8.6 years ago by 5.9k
7
votes
4
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2.8k
views
Is there any tool/API available to convert GTF/GFF to JSON format?
gtf gff json ncbi ensembl
updated 2.9 years ago by ▴ 130 • written 4.0 years ago by 5.9k
0
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0
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1.9k
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Comment: Comment: How can I find matches between two csv files according to multiple columns using
3.2 years ago by lakhujanivijay 5.9k
0
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0
replies
1.6k
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Comment: Comment: GISTIC installation error
3.4 years ago by lakhujanivijay 5.9k
0
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2
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1.6k
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Comment: Comment: GISTIC installation error
3.4 years ago by lakhujanivijay 5.9k
0
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1
reply
3.2k
views
Comment: Comment: Which R function can be used for intersection of genomic coordinates from one fi
3.5 years ago by lakhujanivijay 5.9k
0
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1
reply
2.6k
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Comment: Comment: CNVKit for unmatched tumor-only WGS samples
3.5 years ago by lakhujanivijay 5.9k
0
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1
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8.3k
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Comment: Comment: GATK Input files reference and features have incompatible contigs: No overlappin
3.5 years ago by lakhujanivijay 5.9k
0
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1
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8.3k
views
Answer: Answer: GATK Input files reference and features have incompatible contigs: No overlappin
3.5 years ago by lakhujanivijay 5.9k
1
vote
0
replies
1.1k
views
Answer: Answer: Filtering out relevant Gene-fusions
3.5 years ago by lakhujanivijay 5.9k
1
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0
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4.6k
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Comment: Comment: Error encountered while running stattest from ballgown package
3.5 years ago by lakhujanivijay 5.9k
0
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0
replies
1.2k
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Comment: Comment: Mutation hunting in 100 exome samples
3.6 years ago by lakhujanivijay 5.9k
0
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1
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3.9k
views
Comment: Comment: Bioinformatics tutor good in Python
updated 3.6 years ago by 21k • written 3.6 years ago by 5.9k
0
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0
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832
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Comment: C: Accessing tar File Data from cBioPortal
3.7 years ago by lakhujanivijay 5.9k
0
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0
replies
752
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Comment: A: Help me solve this error in bigSCale2
3.7 years ago by lakhujanivijay 5.9k
0
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0
replies
2.0k
views
Comment: C: low assignment reads % in RNA-seq
3.8 years ago by lakhujanivijay 5.9k
0
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0
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736
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Comment: C: Get fasta sequences with Biopython
3.8 years ago by lakhujanivijay 5.9k
0
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0
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2.0k
views
Comment: C: low assignment reads % in RNA-seq
3.8 years ago by lakhujanivijay 5.9k
0
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0
replies
1.1k
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Answer: A: Express v_1.5.1 Error: Transcript IDs from MultiFASTA do not match with (SAM/BAM
3.8 years ago by lakhujanivijay 5.9k
0
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0
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8.6k
views
Comment: C: how to choose hub genes in wgcna
4.1 years ago by lakhujanivijay 5.9k
0
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0
replies
1.4k
views
Comment: C: error while executing panX script (KeyError: 'db_xref').
4.2 years ago by lakhujanivijay 5.9k
0
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1
reply
2.8k
views
Comment: C: Help needed with LOHHLA pipeline
4.2 years ago by lakhujanivijay 5.9k
0
votes
1
reply
2.1k
views
Comment: C: network construction in cytoscape
4.2 years ago by lakhujanivijay 5.9k
2
votes
0
replies
832
views
Answer: A: phenotype in meta analysis
4.2 years ago by lakhujanivijay 5.9k
0
votes
1
reply
1.9k
views
Comment: C: Chia-pipe cannot find the module pigz
4.2 years ago by lakhujanivijay 5.9k
1
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0
replies
1.5k
views
Comment: C: Variant Calling pipeline to be run parallel on multiple cores
updated 4.2 years ago by 44k • written 4.2 years ago by 5.9k
0
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0
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1.5k
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Comment: C: Variant Calling pipeline to be run parallel on multiple cores
4.2 years ago by lakhujanivijay 5.9k
0
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0
replies
1.2k
views
Comment: C: hhblits and pssm
4.3 years ago by lakhujanivijay 5.9k
0
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1
reply
1.4k
views
Comment: C: grep gene location from gff without removing duplication
4.3 years ago by lakhujanivijay 5.9k
0
votes
0
replies
11k
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Comment: C: How do I find out the read lenght of a fastq file?
4.3 years ago by lakhujanivijay 5.9k
5
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1
reply
11k
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Answer: A: How do I find out the read lenght of a fastq file?
4.3 years ago by lakhujanivijay 5.9k
4
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0
replies
1.4k
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Comment: C: ACMG 59 genes
4.4 years ago by lakhujanivijay 5.9k
1
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0
replies
1.5k
views
Comment: C: Get summary of aligned sequences
4.4 years ago by lakhujanivijay 5.9k
0
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1
reply
1.5k
views
Answer: A: How to call and INDEL using GATK
4.5 years ago by lakhujanivijay 5.9k
0
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0
replies
4.6k
views
Answer: Answer: fastq to fasta perl
updated 2.8 years ago by 44k • written 4.6 years ago by 5.9k
0
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0
replies
1.2k
views
Comment: C: Calling CNVs in exomes - CLAMMS
4.6 years ago by lakhujanivijay 5.9k
0
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0
replies
1.2k
views
Answer: A: Calling CNVs in exomes - CLAMMS
4.6 years ago by lakhujanivijay 5.9k
1
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0
replies
3.0k
views
Comment: C: Biopython vs Python
4.6 years ago by lakhujanivijay 5.9k
0
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0
replies
2.6k
views
Comment: C: Installing gatk inside singularity container
4.6 years ago by lakhujanivijay 5.9k
1
vote
2
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2.6k
views
Installing gatk inside singularity container
singularity container gatk
4.6 years ago by lakhujanivijay 5.9k
0
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0
replies
4.9k
views
Answer: A: How to add file name after > in a multi-fasta file?
4.6 years ago by lakhujanivijay 5.9k
1
vote
0
replies
996
views
Answer: A: ChIA-PET2: Error: Don't have enough confident interactions to learn the model.
4.6 years ago by lakhujanivijay 5.9k
1
vote
1
reply
1.9k
views
Answer: A: Sum up values for a specific column of multiple files
4.6 years ago by lakhujanivijay 5.9k
3
votes
0
replies
3.9k
views
Answer: A: 16S-specific multiple alignment of rDNA sequences
4.6 years ago by lakhujanivijay 5.9k
0
votes
0
replies
836
views
Answer: A: genome alignment for more than 6000 sequences
4.6 years ago by lakhujanivijay 5.9k
0
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0
replies
4.5k
views
Comment: C: Reference genome and samtools reheader option
4.6 years ago by lakhujanivijay 5.9k
895 results • Page 1 of 18
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