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5
votes
5
replies
924
views
Convert genomic files from known Gigabases(# of bases) to gigabytes
gigabases
gigabytes
genomics
updated 22 months ago by
GenoMax
148k • written 22 months ago by
datanerd
▴ 520
1
vote
1
reply
572
views
gigabases to gigabytes for different assays?
gigabases
updated 2.1 years ago by
GenoMax
148k • written 2.1 years ago by
datanerd
▴ 520
0
votes
0
replies
725
views
Comment:
Comment: Human cell atlas TCR analysis
2.2 years ago by
datanerd
▴ 520
0
votes
2
replies
725
views
Human cell atlas TCR analysis
TCR
cell
single
2.2 years ago by
datanerd
▴ 520
0
votes
0
replies
417
views
TCR data from HCA and ImmuneCode
TCR
2.3 years ago by
datanerd
▴ 520
0
votes
0
replies
475
views
TCGA data downloaded from GDC
TCGA
2.5 years ago by
datanerd
▴ 520
0
votes
1
reply
3.1k
views
Answer:
Answer: How can I find DEGs between groups in one cluster of scRNA-Seq Seurat object?
updated 2.6 years ago by
GenoMax
148k • written 2.6 years ago by
datanerd
▴ 520
0
votes
0
replies
1.9k
views
Comment:
Comment: How to match 2 columns from 2 different tsv files?
2.7 years ago by
datanerd
▴ 520
0
votes
1
reply
1.9k
views
Comment:
Comment: How to match 2 columns from 2 different tsv files?
2.7 years ago by
datanerd
▴ 520
0
votes
1
reply
627
views
gnomad meta data?
gnomad
updated 2.7 years ago by
Jesse
▴ 850 • written 2.7 years ago by
datanerd
▴ 520
3
votes
5
replies
1.3k
views
Forum:
1000 genomes data?
DNA
1000genomes
variation
updated 2.8 years ago by
Ram
44k • written 2.8 years ago by
datanerd
▴ 520
0
votes
0
replies
385
views
GWAS data catalogs?
GWAS
2.9 years ago by
datanerd
▴ 520
4
votes
2
replies
660
views
Reference datasets for alignment?
reference
updated 2.9 years ago by
GenoMax
148k • written 2.9 years ago by
datanerd
▴ 520
0
votes
0
replies
1.8k
views
Comment:
Comment: What are the pain points of using Genomics on the cloud today?
2.9 years ago by
datanerd
▴ 520
0
votes
2
replies
1.8k
views
Comment:
Comment: What are the pain points of using Genomics on the cloud today?
2.9 years ago by
datanerd
▴ 520
3
votes
8
replies
1.8k
views
Forum:
What are the pain points of using Genomics on the cloud today?
datasharing
pipelines
workspaces
cloud
genomics
updated 2.9 years ago by
Jeremy Leipzig
22k • written 2.9 years ago by
datanerd
▴ 520
0
votes
0
replies
475
views
Preferred analysis pipeline for clinical WGS analysis and annotation?
calling
variant
clinical
annotation
WGS
3.0 years ago by
datanerd
▴ 520
0
votes
0
replies
2.4k
views
Comment:
Comment: How can NIH SRA data be more useful?
3.0 years ago by
datanerd
▴ 520
0
votes
0
replies
2.4k
views
Comment:
Comment: How can NIH SRA data be more useful?
3.0 years ago by
datanerd
▴ 520
0
votes
1
reply
2.4k
views
Comment:
Comment: How can NIH SRA data be more useful?
3.0 years ago by
datanerd
▴ 520
0
votes
2
replies
2.4k
views
Comment:
Comment: How can NIH SRA data be more useful?
3.0 years ago by
datanerd
▴ 520
14
votes
10
replies
2.4k
views
How can NIH SRA data be more useful?
SRA
resource
genomics
opendata
updated 3.0 years ago by
Jeremy Leipzig
22k • written 3.1 years ago by
datanerd
▴ 520
0
votes
1
reply
2.1k
views
Comment:
Comment: Most useful public genomic/genetic databases/tools/applications
3.1 years ago by
datanerd
▴ 520
0
votes
1
reply
2.1k
views
Comment:
Comment: Most useful public genomic/genetic databases/tools/applications
3.1 years ago by
datanerd
▴ 520
0
votes
0
replies
2.1k
views
Comment:
Comment: Most useful public genomic/genetic databases/tools/applications
3.1 years ago by
datanerd
▴ 520
0
votes
0
replies
2.1k
views
Comment:
Comment: Most useful public genomic/genetic databases/tools/applications
3.1 years ago by
datanerd
▴ 520
8
votes
9
replies
2.1k
views
Forum:
Most useful public genomic/genetic databases/tools/applications
public-data
genomics
Genetics
open-access
updated 23 months ago by
Ram
44k • written 3.1 years ago by
datanerd
▴ 520
1
vote
1
reply
2.0k
views
SNP2HLA merge dosage files with overlaping samples
SNP2HLA
SNP
HLA
DOSAGE
updated 4.4 years ago by
Kevin Blighe
88k • written 7.9 years ago by
datanerd
▴ 520
1
vote
3
replies
2.7k
views
Need Cluster of cluster analysis steps
CoC
cluster of cluster
Integration
clustering
updated 5.0 years ago by
Biostar
20 • written 8.8 years ago by
datanerd
▴ 520
0
votes
0
replies
1.7k
views
Comment:
C: feature selection for specific disease groups
updated 5.0 years ago by
Ram
44k • written 8.9 years ago by
datanerd
▴ 520
0
votes
1
reply
7.8k
views
Comment:
C: How to query for a specific motif upstream of each of the gene in a list?
updated 5.0 years ago by
Ram
44k • written 10.7 years ago by
datanerd
▴ 520
0
votes
0
replies
7.8k
views
Comment:
C: How to query for a specific motif upstream of each of the gene in a list?
updated 5.0 years ago by
Ram
44k • written 10.7 years ago by
datanerd
▴ 520
0
votes
1
reply
7.8k
views
Comment:
C: How to query for a specific motif upstream of each of the gene in a list?
updated 5.0 years ago by
Ram
44k • written 10.7 years ago by
datanerd
▴ 520
0
votes
1
reply
7.8k
views
Comment:
C: How to query for a specific motif upstream of each of the gene in a list?
updated 5.0 years ago by
Ram
44k • written 10.7 years ago by
datanerd
▴ 520
0
votes
1
reply
2.7k
views
Comment:
C: Illumina Custom amplicon data issue
updated 5.0 years ago by
Ram
44k • written 10.6 years ago by
datanerd
▴ 520
0
votes
0
replies
3.5k
views
Comment:
C: Best way to create a genomic portal web app
updated 5.1 years ago by
Ram
44k • written 9.2 years ago by
datanerd
▴ 520
0
votes
0
replies
2.1k
views
Comment:
C: integrated Network analysis using WGCNA - queries
updated 5.2 years ago by
Ram
44k • written 9.4 years ago by
datanerd
▴ 520
0
votes
0
replies
2.1k
views
Comment:
C: integrated Network analysis using WGCNA - queries
updated 5.2 years ago by
Ram
44k • written 9.4 years ago by
datanerd
▴ 520
0
votes
0
replies
4.6k
views
Comment:
C: Output from Trimmomatic paired end data- use the paired survived output?
updated 5.2 years ago by
Ram
44k • written 9.5 years ago by
datanerd
▴ 520
0
votes
0
replies
4.6k
views
Comment:
C: Output from Trimmomatic paired end data- use the paired survived output?
updated 5.2 years ago by
Ram
44k • written 9.5 years ago by
datanerd
▴ 520
0
votes
1
reply
4.2k
views
Comment:
C: SRA/ GEO format help
updated 5.2 years ago by
Ram
44k • written 9.5 years ago by
datanerd
▴ 520
0
votes
0
replies
7.8k
views
Comment:
C: How to query for a specific motif upstream of each of the gene in a list?
updated 5.2 years ago by
Ram
44k • written 10.6 years ago by
datanerd
▴ 520
3
votes
2
replies
2.0k
views
Tool:
Single cell rnaseq analysis pipeline available
scRNA-seq
seurat
Chromium10x
scRNA
updated 18 months ago by
Ram
44k • written 5.6 years ago by
datanerd
▴ 520
1
vote
0
replies
2.0k
views
Comment:
C: Single cell rnaseq analysis pipeline available
5.6 years ago by
datanerd
▴ 520
0
votes
2
replies
2.9k
views
Duplicates in plink files (same position, same ref allele but different A1 allele)
plink
SNPchip
GWAS
updated 3.3 years ago by
Ram
44k • written 8.5 years ago by
datanerd
▴ 520
1
vote
1
reply
1.8k
views
Conditional analysis on dosage file -what program to use?
conditional-analysis
plink
GWAS
association
updated 7.2 years ago by
pfs
▴ 280 • written 7.4 years ago by
datanerd
▴ 520
0
votes
0
replies
3.0k
views
shapeit2 pre-phasing error- empty hap file
GWAS
shapeit2
pre-phasing
updated 8.3 years ago by
Biostar
20 • written 8.5 years ago by
datanerd
▴ 520
0
votes
0
replies
2.1k
views
Comment:
C: GWAS from case/control + family based WGS data -how to effectively use together
8.5 years ago by
datanerd
▴ 520
0
votes
2
replies
2.1k
views
GWAS from case/control + family based WGS data -how to effectively use together
GWAS
familial variant filter
updated 8.5 years ago by
natasha.sernova
★ 4.0k • written 8.5 years ago by
datanerd
▴ 520
0
votes
1
reply
1.4k
views
Are mapped reads between 2 regions common?
rnaseq
unique reads
updated 8.5 years ago by
ivivek_ngs
★ 5.2k • written 8.5 years ago by
datanerd
▴ 520
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