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1
vote
1
reply
653
views
tool for the structural variants in the off target sites
next-gen
4.9 years ago by Sara ▴ 260
0
votes
2
replies
1.2k
views
database for mouse tumor supressor genes and oncogenes
gene
4.9 years ago by Sara ▴ 260
0
votes
2
replies
933
views
cloud platform selection for genomics
next-gen
4.9 years ago by Sara ▴ 260
1
vote
1
reply
1.0k
views
getting different number of reads in R1 and R2 after using UMItools
next-gen
updated 4.9 years ago by 20k • written 4.9 years ago by ▴ 260
0
votes
1
reply
666
views
Comment: C: Getting the coordinates of targeted locations by sgRNAs
4.9 years ago by Sara ▴ 260
0
votes
3
replies
666
views
Getting the coordinates of targeted locations by sgRNAs
next-gen
4.9 years ago by Sara ▴ 260
1
vote
1
reply
610
views
plot the number of variations within a certain window
SNP next-gen
4.9 years ago by Sara ▴ 260
5
votes
2
replies
1.3k
views
predicting 3D structure of protein from DNA sequence
next-gen
5.0 years ago by Sara ▴ 260
4
votes
10
replies
1.6k
views
merging VCF files or not
SNP vcf
updated 5.0 years ago by • 0 • written 5.2 years ago by ▴ 260
0
votes
1
reply
722
views
important alignment parameters
alignment
updated 5.1 years ago by ★ 6.9k • written 5.1 years ago by ▴ 260
13
votes
9
replies
5.7k
views
tool to analysis bulk RNAseq data with UMIs
next-gen
updated 5.1 years ago by 20k • written 5.1 years ago by ▴ 260
0
votes
3
replies
5.7k
views
Comment: C: tool to analysis bulk RNAseq data with UMIs
5.1 years ago by Sara ▴ 260
0
votes
1
reply
1.6k
views
Comment: A: merging VCF files or not
5.2 years ago by Sara ▴ 260
0
votes
1
reply
1.6k
views
Comment: C: merging VCF files or not
5.2 years ago by Sara ▴ 260
3
votes
4
replies
1.4k
views
Extracting data from edgeR R package
R edgeR
updated 5.2 years ago by 12k • written 5.2 years ago by ▴ 260
0
votes
1
reply
1.4k
views
Comment: C: extracting data from edgeR R package
5.2 years ago by Sara ▴ 260
8
votes
3
replies
976
views
How safe the UCSC is for patients data
RNA-Seq
updated 5.3 years ago by 85k • written 5.3 years ago by ▴ 260
3
votes
3
replies
3.1k
views
getting error when indexing bam files
genome alignment
updated 5.4 years ago by 14k • written 5.4 years ago by ▴ 260
0
votes
0
replies
817
views
Comparing 2 methods to identify CNVs using WGS data
genome
5.5 years ago by Sara ▴ 260
0
votes
6
replies
1.8k
views
visualizing the Shallow whole genome sequencing on the UCSC
genome
updated 5.5 years ago by ★ 3.4k • written 5.5 years ago by ▴ 260
0
votes
1
reply
1.8k
views
Comment: C: visualizing the Shallow whole genome sequencing on the UCSC
5.5 years ago by Sara ▴ 260
0
votes
2
replies
2.3k
views
frequency of each nucleotide at each position in sequence
RNA-Seq
written 7.2 years ago by ▴ 260
1
vote
1
reply
864
views
read counts per chromosome arm
genome alignment
updated 5.5 years ago by 164k • written 5.5 years ago by ▴ 260
4
votes
3
replies
2.6k
views
DE analysis using single cell RNA-seq data
rna-seq
updated 5.7 years ago by ▴ 450 • written 7.6 years ago by ▴ 260
1
vote
4
replies
1.9k
views
how to get read density for the first 1000 nt of each transcript
sequence next-gen RNA-Seq
updated 6.5 years ago by 104k • written 8.3 years ago by ▴ 260
1
vote
8
replies
4.2k
views
error in macs2 usage
next-gen
updated 6.8 years ago by • 0 • written 7.9 years ago by ▴ 260
2
votes
6
replies
1.8k
views
problem with the alignment of RNAseq data
RNA-Seq
updated 7.0 years ago by 20 • written 7.1 years ago by ▴ 260
0
votes
2
replies
1.3k
views
removing a part of sequence of all genes
RNA-Seq
updated 7.1 years ago by ▴ 660 • written 7.1 years ago by ▴ 260
0
votes
4
replies
2.3k
views
counting the reads that mapped to a part of transcriptome
RNA-Seq
updated 7.1 years ago by ▴ 660 • written 7.1 years ago by ▴ 260
0
votes
0
replies
2.3k
views
Comment: C: counting the reads that mapped to a part of transcriptome
7.1 years ago by Sara ▴ 260
1
vote
4
replies
1.4k
views
isolating in frame reads from a file
RNA-Seq
updated 7.1 years ago by ▴ 660 • written 7.1 years ago by ▴ 260
1
vote
4
replies
3.8k
views
how to visualize the RNAseq data on IGV
RNA-Seq
7.1 years ago by Sara ▴ 260
0
votes
1
reply
3.1k
views
IGV vs UCSC and comparison
RNA-Seq
7.2 years ago by Sara ▴ 260
1
vote
1
reply
1.1k
views
problem with old UCSC browser links
RNA-Seq
7.2 years ago by Sara ▴ 260
1
vote
2
replies
1.5k
views
tools to get the coverage
RNA-Seq
7.3 years ago by Sara ▴ 260
3
votes
3
replies
2.7k
views
extracting data from bam file
RNA-Seq
updated 7.3 years ago by 8.8k • written 7.3 years ago by ▴ 260
0
votes
3
replies
1.7k
views
position of each codon and anti codon on transcriptome
genome
updated 7.5 years ago by 20 • written 7.6 years ago by ▴ 260
0
votes
1
reply
1.7k
views
Comment: A: position of each codon and anti codon on transcriptome
7.6 years ago by Sara ▴ 260
0
votes
0
replies
1.7k
views
Comment: A: number of mismatches for the alignment
7.6 years ago by Sara ▴ 260
1
vote
3
replies
1.7k
views
number of mismatches for the alignment
RNA-Seq
7.6 years ago by Sara ▴ 260
9
votes
10
replies
7.7k
views
Isolating reads from specific region from bam file
RNA-Seq
updated 3.5 years ago by 88k • written 7.7 years ago by ▴ 260
2
votes
2
replies
3.9k
views
identification of adapters from fastq file.
RNA-Seq
updated 7.7 years ago by 13k • written 7.7 years ago by ▴ 260
0
votes
0
replies
2.0k
views
M6A-seq and narrowpeak file
next-gen
7.9 years ago by Sara ▴ 260
0
votes
1
reply
4.2k
views
Comment: C: error in macs2 usage
7.9 years ago by Sara ▴ 260
0
votes
1
reply
4.2k
views
Comment: C: error in macs2 usage
7.9 years ago by Sara ▴ 260
4
votes
3
replies
5.8k
views
filtering genes out from bam file using samtools
alignment
updated 7.9 years ago by 8.9k • written 7.9 years ago by ▴ 260
0
votes
1
reply
1.9k
views
Comment: C: how to get read density for the first 1000 nt of each transcript
8.3 years ago by Sara ▴ 260
147 results • Page 3 of 3
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