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179
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Comment: Comment: wrapping htslib and parsing CRAM files
3 days ago by Pierre Lindenbaum 164k
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2
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522
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Method to detect CNV in a large set of coverage profile ?
bam cnv coverage machine-learning
updated 7 days ago by ★ 18k • written 8 days ago by 164k
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492
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Comment: Comment: BCFTOOLS: command does not work correctly. Can you help me?
8 days ago by Pierre Lindenbaum 164k
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224
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Comment: Comment: Generating SVG figure by pasting XML text directly
9 days ago by Pierre Lindenbaum 164k
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281
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Comment: Comment: Where can I download a BED file with exonic regions?
10 days ago by Pierre Lindenbaum 164k
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281
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Comment: Comment: Where can I download a BED file with exonic regions?
10 days ago by Pierre Lindenbaum 164k
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1
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566
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Comment: Comment: What is the best way to confirm if a mutated gene is more frequent in recurrence
11 days ago by Pierre Lindenbaum 164k
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1
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566
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Comment: Comment: What is the best way to confirm if a mutated gene is more frequent in recurrence
12 days ago by Pierre Lindenbaum 164k
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383
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Comment: Comment: Clarification with vcf file
12 days ago by Pierre Lindenbaum 164k
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1
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383
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Comment: Comment: Clarification with vcf file
12 days ago by Pierre Lindenbaum 164k
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1
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748
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Comment: Comment: count number of polymorphic sites among samples in vcf
20 days ago by Pierre Lindenbaum 164k
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1
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411
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Comment: Comment: Inquiry about depth of coverage and copy number variation
21 days ago by Pierre Lindenbaum 164k
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1
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401
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Comment: Comment: Conversion from .lib to .faa file
21 days ago by Pierre Lindenbaum 164k
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752
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Comment: Comment: GATK - Output differences in Calls when Split by chromosome intervals and withou
21 days ago by Pierre Lindenbaum 164k
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2
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752
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Comment: Comment: GATK - Output differences in Calls when Split by chromosome intervals and withou
21 days ago by Pierre Lindenbaum 164k
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1
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752
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Comment: Comment: GATK - Output differences in Calls when Split by chromosome intervals and withou
22 days ago by Pierre Lindenbaum 164k
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1
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220
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Answer: Answer: Trinity analysis error
22 days ago by Pierre Lindenbaum 164k
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0
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181
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Comment: Comment: Error in Trinity installation
23 days ago by Pierre Lindenbaum 164k
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181
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Comment: Comment: Error in Trinity installation
updated 22 days ago by 44k • written 23 days ago by 164k
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1
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412
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Comment: Comment: Unable to view BAM files in IGV
24 days ago by Pierre Lindenbaum 164k
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1
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732
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Comment: Comment: Gatk haplotyper
24 days ago by Pierre Lindenbaum 164k
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394
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Answer: Answer: Has this sequence really more then 70k perfect matches in the human genome?
25 days ago by Pierre Lindenbaum 164k
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427
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Comment: Comment: Identifying Runs of Homozygosity and Inbreeding Coefficient from VCF File
27 days ago by Pierre Lindenbaum 164k
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0
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427
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Answer: Answer: Identifying Runs of Homozygosity and Inbreeding Coefficient from VCF File
27 days ago by Pierre Lindenbaum 164k
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0
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427
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Comment: Comment: Identifying Runs of Homozygosity and Inbreeding Coefficient from VCF File
27 days ago by Pierre Lindenbaum 164k
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254
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Comment: Comment: Seeking Tool to Convert Chromosome Coordinates to cDNA Coordinates for Arabidops
27 days ago by Pierre Lindenbaum 164k
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323
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Comment: Comment: Issue with nf-core smRNAseq Pipeline Execution
28 days ago by Pierre Lindenbaum 164k
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1
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333
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Answer: Answer: What is the file format of RefSeq Curated Track in IGV?
29 days ago by Pierre Lindenbaum 164k
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5.3k
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Comment: Comment: how to extract the sense and antisene bam files from the single end mapping bam
29 days ago by Pierre Lindenbaum 164k
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1
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530
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Comment: Comment: gene ID to gene symbol in R
29 days ago by Pierre Lindenbaum 164k
2
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0
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402
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Comment: Comment: Extracting single chromosome from WGS cram/bam files before downloading
4 weeks ago by Pierre Lindenbaum 164k
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0
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402
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Comment: Comment: Extracting single chromosome from WGS cram/bam files before downloading
4 weeks ago by Pierre Lindenbaum 164k
2
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0
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220
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Comment: Comment: variant calling through gatk
4 weeks ago by Pierre Lindenbaum 164k
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1
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517
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Comment: Comment: errors in installing picard
4 weeks ago by Pierre Lindenbaum 164k
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1
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517
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Answer: Answer: errors in installing picard
4 weeks ago by Pierre Lindenbaum 164k
3
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0
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282
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Comment: Comment: Problem in calling peak by MACS3
4 weeks ago by Pierre Lindenbaum 164k
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213
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Comment: Comment: How to filter a reference genome for single copy genes?
4 weeks ago by Pierre Lindenbaum 164k
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0
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456
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Answer: Answer: (Nextflow) Having trouble with a generic process to stitch together files that w
4 weeks ago by Pierre Lindenbaum 164k
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1
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278
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Answer: Answer: Basic question but how can I search the NCBI Nucleotide database using BLAST CLI
4 weeks ago by Pierre Lindenbaum 164k
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0
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18k
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Comment: Comment: Easy way to split VCF file by chromosome
4 weeks ago by Pierre Lindenbaum 164k
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0
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181
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Comment: Comment: Unable to install VirSorter - Stuck on "Solving environment"
5 weeks ago by Pierre Lindenbaum 164k
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0
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501
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Answer: Answer: How do I calculate read depth of sequencing?
5 weeks ago by Pierre Lindenbaum 164k
0
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1
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826
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Comment: Comment: Merge VCF files by chromosome and Across samples
5 weeks ago by Pierre Lindenbaum 164k
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1
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520
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Comment: Comment: genome annotation and GFF file formation
5 weeks ago by Pierre Lindenbaum 164k
1
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0
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826
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Comment: Comment: Merge VCF files by chromosome and Across samples
5 weeks ago by Pierre Lindenbaum 164k
1
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0
replies
826
views
Comment: Comment: Merge VCF files by chromosome and Across samples
5 weeks ago by Pierre Lindenbaum 164k
1
vote
1
reply
826
views
Comment: Comment: Merge VCF files by chromosome and Across samples
5 weeks ago by Pierre Lindenbaum 164k
1
vote
1
reply
826
views
Comment: Comment: Merge VCF files by chromosome and Across samples
5 weeks ago by Pierre Lindenbaum 164k
0
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2
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826
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Comment: Comment: Merge VCF files by chromosome and Across samples
5 weeks ago by Pierre Lindenbaum 164k
1
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0
replies
826
views
Comment: Comment: Merge VCF files by chromosome and Across samples
5 weeks ago by Pierre Lindenbaum 164k
12,795 results • Page 1 of 256
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