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Comment: Comment: bcftools stats not counting samples
9 weeks ago by Pierre Lindenbaum 164k
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422
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Comment: Comment: A guide for beginners in bioinformatics
9 weeks ago by Pierre Lindenbaum 164k
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1
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515
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Answer: Answer: bcftools stats not counting samples
9 weeks ago by Pierre Lindenbaum 164k
2
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0
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377
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Answer: Answer: BCFTOOLS VIEW parameter?
10 weeks ago by Pierre Lindenbaum 164k
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0
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377
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Comment: Comment: BCFTOOLS VIEW parameter?
10 weeks ago by Pierre Lindenbaum 164k
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343
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Comment: Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
10 weeks ago by Pierre Lindenbaum 164k
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323
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Answer: Answer: host-specific pathogens taxonomy IDs
updated 10 weeks ago by 44k • written 10 weeks ago by 164k
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323
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Comment: Comment: host-specific pathogens taxonomy IDs
10 weeks ago by Pierre Lindenbaum 164k
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254
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Comment: Comment: how to draw a Manhattan diagram based on the gene names?
10 weeks ago by Pierre Lindenbaum 164k
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791
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Comment: Comment: Identify SNPs with Fst estimates > 0.9 and annotate them
10 weeks ago by Pierre Lindenbaum 164k
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0
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791
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Answer: Answer: Identify SNPs with Fst estimates > 0.9 and annotate them
10 weeks ago by Pierre Lindenbaum 164k
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562
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Comment: Comment: Understanding bedtools coverage for datasets with in-dels.
10 weeks ago by Pierre Lindenbaum 164k
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513
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Answer: Answer: Converting genome build from hg38 to hg19 using liftOver via bigsnpr - error fet
10 weeks ago by Pierre Lindenbaum 164k
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457
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Comment: Comment: vcf file filtration w.r.t. missingness per snps and unmapped snps
11 weeks ago by Pierre Lindenbaum 164k
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457
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Comment: Comment: vcf file filtration w.r.t. missingness per snps and unmapped snps
11 weeks ago by Pierre Lindenbaum 164k
1
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502
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Answer: Answer: How to get APIs or use web-based bioinformatics tools remotely.
11 weeks ago by Pierre Lindenbaum 164k
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257
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Comment: Comment: Do I Need to Filter Indels Before Annotation in GATK Funcotator?
11 weeks ago by Pierre Lindenbaum 164k
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404
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Answer: Answer: Output checks during Snakemake pipeline
11 weeks ago by Pierre Lindenbaum 164k
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260
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Comment: Comment: reconstruct ecDNA.
11 weeks ago by Pierre Lindenbaum 164k
1
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0
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625
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Comment: Comment: How to check coverage in bam file?
12 weeks ago by Pierre Lindenbaum 164k
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625
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Answer: Answer: How to check coverage in bam file?
12 weeks ago by Pierre Lindenbaum 164k
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654
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Comment: Comment: Extracting human exome from GTF file
12 weeks ago by Pierre Lindenbaum 164k
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323
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Comment: Comment: Short tandem repeat (STR) expansions identificaiton workflow from RNA-seq data
12 weeks ago by Pierre Lindenbaum 164k
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216
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Comment: Comment: How to split the aligned output from SortMeRNA into forward and reverse sequence
12 weeks ago by Pierre Lindenbaum 164k
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483
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Comment: Comment: Benchmark hg19 vcf by hs37d5 vcf
12 weeks ago by Pierre Lindenbaum 164k
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808
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Comment: Comment: Convert Gene ID To Gene Name
12 weeks ago by Pierre Lindenbaum 164k
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645
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Comment: Comment: SNPs are not detected.
12 weeks ago by Pierre Lindenbaum 164k
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0
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236
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Answer: Answer: How can I flag possible errors in the handbook collection?
3 months ago by Pierre Lindenbaum 164k
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645
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Comment: Comment: SNPs are not detected.
3 months ago by Pierre Lindenbaum 164k
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610
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Comment: Comment: GATK4 haplotypecaller calls variants on regions without read coverage
3 months ago by Pierre Lindenbaum 164k
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645
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Comment: Comment: SNPs are not detected.
3 months ago by Pierre Lindenbaum 164k
0
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495
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Comment: Comment: bcftools AA annotation failing
3 months ago by Pierre Lindenbaum 164k
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495
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Comment: Comment: bcftools AA annotation failing
3 months ago by Pierre Lindenbaum 164k
0
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1
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610
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Comment: Comment: GATK4 haplotypecaller calls variants on regions without read coverage
3 months ago by Pierre Lindenbaum 164k
0
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1
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610
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Comment: Comment: GATK4 haplotypecaller calls variants on regions without read coverage
3 months ago by Pierre Lindenbaum 164k
0
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1
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666
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Comment: Comment: Extracting supplementary reads from bam file
3 months ago by Pierre Lindenbaum 164k
1
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0
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976
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Comment: Comment: Downloading paired end fastq data from SRA
3 months ago by Pierre Lindenbaum 164k
5
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483
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Answer: Answer: Benchmark hg19 vcf by hs37d5 vcf
updated 3 months ago by 44k • written 3 months ago by 164k
1
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1
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505
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Answer: Answer: AWK for replacing the content of a column in a csv file with the content of anot
3 months ago by Pierre Lindenbaum 164k
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299
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Comment: Comment: Where do I gather indel and frameshift information in SnpEff output?
3 months ago by Pierre Lindenbaum 164k
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679
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Answer: Answer: Download files from Experiment Acession
3 months ago by Pierre Lindenbaum 164k
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405
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Comment: Comment: Unable to remove duplicate sequences
3 months ago by Pierre Lindenbaum 164k
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391
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Comment: Comment: VCF files
3 months ago by Pierre Lindenbaum 164k
2
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306
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Answer: Answer: Basic coding-Stuck with Java script while working with KNIME
3 months ago by Pierre Lindenbaum 164k
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2
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1.0k
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Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by Pierre Lindenbaum 164k
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0
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1.0k
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Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by Pierre Lindenbaum 164k
3
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1.0k
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Comment: Comment: How to give 2 input files (one from the process before and one from 3 processes
3 months ago by Pierre Lindenbaum 164k
1
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0
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276
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Answer: Answer: Common SNP/variome-aware restriction digest generator for human genome
3 months ago by Pierre Lindenbaum 164k
2
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1
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422
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Answer: Answer: Whole Metagenome Analysis
3 months ago by Pierre Lindenbaum 164k
0
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830
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Comment: Comment: Htseq-count problem with gtf/gff file
3 months ago by Pierre Lindenbaum 164k
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