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10
votes
9
replies
11k
views
demultiplex a dataset when you have barcodes as a separate fastq
demultiplex next-gen sequencing
updated 4.4 years ago by 20 • written 7.4 years ago by ▴ 770
1
vote
0
replies
2.7k
views
Answer: A: circRNA-Seq analysis tools
updated 4.7 years ago by 88k • written 6.3 years ago by ▴ 770
7
votes
0
replies
2.5k
views
Answer: A: Why Wilcox.test keep giving (p-val = 0.1) even when there is significant differe
4.9 years ago by IP ▴ 770
0
votes
0
replies
3.1k
views
Comment: C: Circle-Map: Sensitive detection of circular DNA at single-nucleotide resolution
4.9 years ago by IP ▴ 770
1
vote
4
replies
3.1k
views
Tool: Circle-Map: Sensitive detection of circular DNA at single-nucleotide resolution using guided realignment of partially aligned reads
circDNA ecDNA eccDNA
updated 18 months ago by 44k • written 5.6 years ago by ▴ 770
4
votes
1
reply
2.1k
views
Comment: C: Useful productivity tools for bioinformaticians
5.0 years ago by IP ▴ 770
0
votes
0
replies
650
views
Annotation of structural variant mechanism
sequencing structural-variation annotation
5.1 years ago by IP ▴ 770
0
votes
0
replies
3.9k
views
Comment: C: How to extract the circRNA sequences based on the the back-spliced junctions det
5.1 years ago by IP ▴ 770
0
votes
1
reply
1.9k
views
Comment: C: Problem in setting pipeline for circDNA prediction analysis.
5.4 years ago by IP ▴ 770
0
votes
1
reply
1.9k
views
Answer: A: Problem in setting pipeline for circDNA prediction analysis.
5.4 years ago by IP ▴ 770
0
votes
0
replies
3.1k
views
Comment: C: Circle-Map: Sensitive detection of circular DNA at single-nucleotide resolution
5.4 years ago by IP ▴ 770
3
votes
1
reply
1.9k
views
Answer: A: Problem in setting pipeline for circDNA prediction analysis.
5.6 years ago by IP ▴ 770
0
votes
1
reply
1.8k
views
Comment: C: Infer order of supplementary alignments [pysam]
5.6 years ago by IP ▴ 770
2
votes
1
reply
1.8k
views
Answer: A: Infer order of supplementary alignments [pysam]
updated 5.6 years ago by 47k • written 5.6 years ago by ▴ 770
0
votes
1
reply
3.1k
views
Comment: C: Insert mutations in a reference genome from a vcf
5.9 years ago by IP ▴ 770
12
votes
6
replies
3.1k
views
Insert mutations in a reference genome from a vcf
sequencing snp simulation
updated 5.9 years ago by 47k • written 5.9 years ago by ▴ 770
0
votes
0
replies
6.3k
views
Comment: C: Differential expression: replicates in one condition, no replicates in the other
5.9 years ago by IP ▴ 770
9
votes
5
replies
6.3k
views
Differential expression: replicates in one condition, no replicates in the other
RNA-Seq sequencing EdgeR
updated 5.9 years ago by ★ 7.7k • written 7.4 years ago by ▴ 770
0
votes
0
replies
6.6k
views
Comment: C: How to write the output in snakefile (snakemake) for bowtie2-build
6.0 years ago by IP ▴ 770
0
votes
0
replies
1.8k
views
Comment: C: common CNVs among multiple files
6.1 years ago by IP ▴ 770
2
votes
0
replies
1.4k
views
Answer: A: Error correction of long reads
6.1 years ago by IP ▴ 770
4
votes
2
replies
1.4k
views
Error correction of long reads
nanopore pacbio sequencing
6.1 years ago by IP ▴ 770
0
votes
0
replies
1.4k
views
Comment: C: Error correction of long reads
6.1 years ago by IP ▴ 770
6
votes
0
replies
2.9k
views
Answer: A: Predicting binding probability of circRNA and miRNA
6.1 years ago by IP ▴ 770
1
vote
0
replies
2.5k
views
Comment: C: CIRCexplorer2 only looks for exonic circRNA
6.2 years ago by IP ▴ 770
1
vote
1
reply
2.5k
views
Comment: C: CIRCexplorer2 only looks for exonic circRNA
6.2 years ago by IP ▴ 770
2
votes
1
reply
2.5k
views
Answer: A: CIRCexplorer2 only looks for exonic circRNA
6.2 years ago by IP ▴ 770
0
votes
0
replies
6.6k
views
Comment: C: How to write the output in snakefile (snakemake) for bowtie2-build
6.2 years ago by IP ▴ 770
7
votes
1
reply
6.6k
views
Answer: A: How to write the output in snakefile (snakemake) for bowtie2-build
updated 6.2 years ago by 105k • written 6.2 years ago by ▴ 770
9
votes
6
replies
12k
views
Programs of UCSC utilites
software error UCSC kentUtilites
updated 3.5 years ago by 36k • written 8.4 years ago by ▴ 770
0
votes
1
reply
1.4k
views
Answer: A: 4C interaction analysis
6.6 years ago by IP ▴ 770
0
votes
0
replies
1.4k
views
Comment: C: 4C interaction analysis
6.6 years ago by IP ▴ 770
0
votes
2
replies
1.8k
views
How is the 2nd best hit found in bwa-mem
bwa-mem
updated 6.8 years ago by 20 • written 6.9 years ago by ▴ 770
0
votes
0
replies
1.8k
views
Comment: C: How is the 2sd best hit found in bwa-mem
6.9 years ago by IP ▴ 770
1
vote
1
reply
3.9k
views
Comment: C: How to extract the circRNA sequences based on the the back-spliced junctions det
7.0 years ago by IP ▴ 770
0
votes
1
reply
3.9k
views
Comment: C: How to extract the circRNA sequences based on the the back-spliced junctions det
7.0 years ago by IP ▴ 770
0
votes
1
reply
1.8k
views
Comment: C: To screen for a good aligner
7.4 years ago by IP ▴ 770
0
votes
2
replies
11k
views
Comment: C: demultiplex a dataset when you have barcodes as a separate fastq
7.4 years ago by IP ▴ 770
0
votes
0
replies
2.9k
views
Comment: C: The difference between sam files
7.4 years ago by IP ▴ 770
0
votes
1
reply
2.9k
views
Comment: C: The difference between sam files
7.4 years ago by IP ▴ 770
0
votes
0
replies
1.6k
views
Comment: C: segemehl - problem with segemehl.x
7.4 years ago by IP ▴ 770
1
vote
1
reply
2.9k
views
Comment: C: The difference between sam files
7.4 years ago by IP ▴ 770
0
votes
0
replies
1.7k
views
Gene expression sperm database
GTEx RNA-Seq
7.5 years ago by IP ▴ 770
0
votes
1
reply
3.1k
views
Comment: C: Where can I download whole genome sequencing data and variant calling result of
7.5 years ago by IP ▴ 770
0
votes
1
reply
2.9k
views
Comment: C: problems installing samtools and bcftools simultaneously
7.5 years ago by IP ▴ 770
2
votes
0
replies
2.1k
views
Answer: A: Extract R2F1 reads
7.5 years ago by IP ▴ 770
2
votes
3
replies
2.1k
views
Extract R2F1 reads
Structural Variation pysam samtools
7.5 years ago by IP ▴ 770
0
votes
0
replies
2.1k
views
Comment: C: Extract R2F1 reads
7.5 years ago by IP ▴ 770
0
votes
0
replies
1.6k
views
Comment: C: Aligning with huge insertion variations
7.5 years ago by IP ▴ 770
0
votes
1
reply
3.9k
views
Comment: C: How to extract the circRNA sequences based on the the back-spliced junctions det
7.5 years ago by IP ▴ 770
110 results • Page 1 of 3
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