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0
votes
1
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1.8k
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Answer:
A: Using Entrez to find the taxonomy for an accession number
4.8 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
1
reply
1.9k
views
Answer:
C: How to download from ncbi not a whole FASTA file, but only a certain interval?
4.8 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
0
replies
3.2k
views
Answer:
A: Fetching Genbank Assembly IDs with protein
4.8 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
2.5k
views
Comment:
C: How to get GTF file for Rousettus_aegyptiacus?
4.8 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
3.2k
views
Comment:
C: Fetching Genbank Assembly IDs with protein
4.8 years ago by
vkkodali_ncbi
★ 3.8k
2
votes
1
reply
3.2k
views
Answer:
A: Fetching Genbank Assembly IDs with protein
4.8 years ago by
vkkodali_ncbi
★ 3.8k
2
votes
0
replies
2.0k
views
Answer:
A: How to parse sequences from a gbk file, based on the coordinates specified in gi
4.8 years ago by
vkkodali_ncbi
★ 3.8k
2
votes
1
reply
2.5k
views
Answer:
A: How to get GTF file for Rousettus_aegyptiacus?
4.8 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
0
replies
1.8k
views
Answer:
A: How to download fasta files of a particular genus bacteria available in NCBI?
4.9 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
3.2k
views
Comment:
C: Is there any way to download knownCanonical set from the NCBI Refseq track as it
4.9 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
3.2k
views
Comment:
C: Is there any way to download knownCanonical set from the NCBI Refseq track as it
4.9 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
3.2k
views
Comment:
C: Is there any way to download knownCanonical set from the NCBI Refseq track as it
4.9 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
2.7k
views
Answer:
A: Finding the parent gene of pseudogene in mouse
4.9 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
7.7k
views
Answer:
A: COnverting mouse gene ID to Human gene ID
4.9 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
1.1k
views
Comment:
C: Hisat2 --sra-acc option (redirect sra file to a desired directory)
4.9 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
3.4k
views
Comment:
C: Retrieve genomic physical coordinates of 3'UTR for set of genes
4.9 years ago by
vkkodali_ncbi
★ 3.8k
3
votes
1
reply
3.4k
views
Answer:
A: Retrieve genomic physical coordinates of 3'UTR for set of genes
4.9 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
0
replies
1.5k
views
Comment:
C: Splitting a big file according to the first colum value with bash
5.0 years ago by
vkkodali_ncbi
★ 3.8k
2
votes
1
reply
1.5k
views
Answer:
A: Splitting a big file according to the first colum value with bash
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
3.8k
views
Comment:
C: Where to get tbl2asn tool's current version?
5.0 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
1
reply
3.8k
views
Answer:
C: Where to get tbl2asn tool's current version?
5.0 years ago by
vkkodali_ncbi
★ 3.8k
7
votes
0
replies
1.4k
views
Answer:
A: Is there a tool to extract organism names from SRA accession IDs?
5.0 years ago by
vkkodali_ncbi
★ 3.8k
4
votes
0
replies
5.7k
views
Answer:
A: Intron and exon coordinates of all genes from Hg19
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
14k
views
Comment:
C: NCBI Accession Number to Taxonomy ID
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
1.5k
views
Comment:
C: Mapping many GI numbers returned from ESearch to Accessions from nr.gz (non-redu
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
2
replies
1.5k
views
Comment:
C: Mapping many GI numbers returned from ESearch to Accessions from nr.gz (non-redu
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
1.5k
views
Comment:
C: Mapping many GI numbers returned from ESearch to Accessions from nr.gz (non-redu
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
1.3k
views
Comment:
C: accessing ncbi nucleotide section with python
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
1.3k
views
Comment:
C: accessing ncbi nucleotide section with python
5.0 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
1
reply
1.3k
views
Comment:
C: accessing ncbi nucleotide section with python
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
1.5k
views
Comment:
C: Obtaining nucleotide sequences from a set of protein identifiers
5.0 years ago by
vkkodali_ncbi
★ 3.8k
8
votes
2
replies
1.5k
views
Answer:
A: Obtain N50 stats from NCBI for all Hymenoptera genome assemblies
5.0 years ago by
vkkodali_ncbi
★ 3.8k
2
votes
1
reply
1.3k
views
Answer:
A: Entrez Direct: epost removes duplicates
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
1.3k
views
Comment:
C: NCBI GEO: Empty FTP directory!
5.0 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
1.3k
views
Comment:
C: NCBI e-utilities: timeout and restart
5.0 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
1
reply
1.9k
views
Comment:
C: How to obtain all accession.version identifiers for a BLAST database using ENTRE
5.1 years ago by
vkkodali_ncbi
★ 3.8k
2
votes
1
reply
2.0k
views
Answer:
C: XML from entrez not formatted correctly
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
2
replies
2.0k
views
Comment:
C: XML from entrez not formatted correctly
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
2.0k
views
Comment:
C: XML from entrez not formatted correctly
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
637
views
Comment:
C: Gene names from gene ids for Pisum Sativum
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
2.0k
views
Comment:
C: XML from entrez not formatted correctly
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
2.2k
views
Comment:
C: NCBI vs Liftover vs ENSEMBL for Assembly Conversion for SNP data (GRCh37 to GRCh
5.1 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
1
reply
2.2k
views
Comment:
C: NCBI vs Liftover vs ENSEMBL for Assembly Conversion for SNP data (GRCh37 to GRCh
5.1 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
1
reply
845
views
Answer:
A: NCBI rRNA sequence search
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
1.1k
views
Comment:
C: How to retrieve/extract specific intergenic regions?
5.1 years ago by
vkkodali_ncbi
★ 3.8k
1
vote
1
reply
3.8k
views
Comment:
C: Retrieve FASTA sequences for all genes from GRCh38.p13
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
1.4k
views
Comment:
C: Mal-formed sequence line error in Bio.SeqIO
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
1
reply
7.6k
views
Answer:
A: How to get the chromosome numbers from RefSeq accession IDs?
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
9.0k
views
Answer:
A: How to obtain the chromosome out of an accession number?
5.1 years ago by
vkkodali_ncbi
★ 3.8k
0
votes
0
replies
3.8k
views
Answer:
A: select longest isoform from RefSeq proteome fasta
5.1 years ago by
vkkodali_ncbi
★ 3.8k
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