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0
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0
replies
900
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Planned comparison with a ridge regression.
Regression contrast
5.2 years ago by mforde84 ★ 1.4k
1
vote
2
replies
1.5k
views
Optimal # clusters
cluster
updated 5.6 years ago by 20 • written 7.4 years ago by ★ 1.4k
0
votes
2
replies
2.4k
views
Interpreting level-3 TCGA methylseq data
methylseq bisulfate data analysis
updated 5.7 years ago by ▴ 50 • written 7.9 years ago by ★ 1.4k
6
votes
13
replies
3.8k
views
Hypergeometric GO analysis? and network diagram of generated GO terms
gene ontology network diagram visualization
updated 5.7 years ago by 20 • written 8.0 years ago by ★ 1.4k
0
votes
0
replies
3.9k
views
Comment: C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by mforde84 ★ 1.4k
0
votes
1
reply
3.9k
views
Comment: C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by mforde84 ★ 1.4k
0
votes
0
replies
3.9k
views
Comment: C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by mforde84 ★ 1.4k
0
votes
2
replies
3.9k
views
Comment: C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by mforde84 ★ 1.4k
0
votes
0
replies
3.9k
views
Comment: C: [IMMEDIATE JOB OPENING] HPC Systems Administrator, Center for Research Informati
6.0 years ago by mforde84 ★ 1.4k
3
votes
5
replies
4.8k
views
Genes associated with GO term
GO gene
updated 3.1 years ago by ▴ 10 • written 7.8 years ago by ★ 1.4k
0
votes
2
replies
3.0k
views
ComBat on TCGA RNAseq data generates all NAN
ComBat tcga
updated 6.0 years ago by • 0 • written 7.4 years ago by ★ 1.4k
1
vote
0
replies
2.4k
views
Comment: C: How to filter normalized RNA-Seq transcripts for the purpose of predicting a con
6.7 years ago by mforde84 ★ 1.4k
0
votes
1
reply
1.6k
views
Job: Bioinformatics role becoming available at University of Chicago
genome ngs microarray
updated 18 months ago by 44k • written 6.9 years ago by ★ 1.4k
4
votes
1
reply
2.9k
views
Interpretation of transcripts with retained intron
ensembl rna-seq
updated 6.9 years ago by 20 • written 7.1 years ago by ★ 1.4k
2
votes
1
reply
1.6k
views
Comment: C: How to select tumor GO terms, if I did not find any in my biological process GO
6.9 years ago by mforde84 ★ 1.4k
0
votes
1
reply
2.9k
views
Comment: C: rsem-calculate-expression fails to open iso_res file
6.9 years ago by mforde84 ★ 1.4k
0
votes
0
replies
6.3k
views
Comment: C: Merge fastq reads for several samples
6.9 years ago by mforde84 ★ 1.4k
2
votes
1
reply
1.6k
views
Comment: C: How to select tumor GO terms, if I did not find any in my biological process GO
6.9 years ago by mforde84 ★ 1.4k
2
votes
0
replies
4.2k
views
Comment: C: WES -- How come I found 40% mutations intron regions
6.9 years ago by mforde84 ★ 1.4k
0
votes
2
replies
6.3k
views
Comment: C: Merge fastq reads for several samples
6.9 years ago by mforde84 ★ 1.4k
0
votes
1
reply
2.9k
views
Comment: C: rsem-calculate-expression fails to open iso_res file
6.9 years ago by mforde84 ★ 1.4k
0
votes
0
replies
1.1k
views
Comment: C: Slight confusion about trimming paired end reads in RNAseq experiment
7.0 years ago by mforde84 ★ 1.4k
0
votes
1
reply
1.1k
views
Comment: C: Slight confusion about trimming paired end reads in RNAseq experiment
7.0 years ago by mforde84 ★ 1.4k
5
votes
4
replies
1.1k
views
Slight confusion about trimming paired end reads in RNAseq experiment
RNAseq
7.0 years ago by mforde84 ★ 1.4k
0
votes
0
replies
3.9k
views
Comment: C: STAR index generation option --sjdbOverhang for paired-end ?
7.0 years ago by mforde84 ★ 1.4k
0
votes
1
reply
10.0k
views
Comment: C: Quantile normalizing prior to or after TPM scaling?
7.0 years ago by mforde84 ★ 1.4k
0
votes
1
reply
10.0k
views
Comment: C: Quantile normalizing prior to or after TPM scaling?
7.0 years ago by mforde84 ★ 1.4k
0
votes
1
reply
10.0k
views
Comment: C: Quantile normalizing prior to or after TPM scaling?
7.0 years ago by mforde84 ★ 1.4k
4
votes
8
replies
10.0k
views
Quantile normalizing prior to or after TPM scaling?
RNAseq normalization
updated 21 months ago by 88k • written 7.0 years ago by ★ 1.4k
0
votes
2
replies
2.6k
views
Gene level from transcript level expression estimate.
RNA-Seq
updated 7.0 years ago by • 0 • written 7.1 years ago by ★ 1.4k
0
votes
1
reply
2.4k
views
Comment: C: Retained intron transcripts
7.0 years ago by mforde84 ★ 1.4k
3
votes
3
replies
2.4k
views
Retained intron transcripts
RNAseq
7.0 years ago by mforde84 ★ 1.4k
0
votes
1
reply
3.9k
views
Comment: C: Differential Expression of Targeted RNA-Seq
7.1 years ago by mforde84 ★ 1.4k
0
votes
1
reply
3.9k
views
Comment: C: Differential Expression of Targeted RNA-Seq
7.1 years ago by mforde84 ★ 1.4k
0
votes
0
replies
2.7k
views
Comment: C: DNA-seq and RNA-seq bam from TCGA for a single sample
7.1 years ago by mforde84 ★ 1.4k
0
votes
1
reply
3.9k
views
Comment: C: Differential Expression of Targeted RNA-Seq
7.1 years ago by mforde84 ★ 1.4k
2
votes
1
reply
2.7k
views
Answer: C: SRA data sets and runs
7.1 years ago by mforde84 ★ 1.4k
0
votes
0
replies
2.7k
views
Answer: A: DNA-seq and RNA-seq bam from TCGA for a single sample
7.1 years ago by mforde84 ★ 1.4k
1
vote
0
replies
2.5k
views
Comment: C: Salmon, Getting New TPM from new, updated NumReads
7.1 years ago by mforde84 ★ 1.4k
2
votes
2
replies
2.3k
views
Answer: A: RNA-seq quality assessment
7.1 years ago by mforde84 ★ 1.4k
0
votes
0
replies
1.8k
views
Comment: C: Endogenous retrotransposons quantifaction from RNAseq
7.1 years ago by mforde84 ★ 1.4k
1
vote
2
replies
1.8k
views
Endogenous retrotransposons quantifaction from RNAseq
RNA-Seq
updated 7.1 years ago by 104k • written 7.1 years ago by ★ 1.4k
2
votes
1
reply
66k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by mforde84 ★ 1.4k
0
votes
0
replies
66k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by mforde84 ★ 1.4k
2
votes
1
reply
66k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by mforde84 ★ 1.4k
2
votes
0
replies
66k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
7.2 years ago by mforde84 ★ 1.4k
0
votes
1
reply
1.7k
views
Comment: C: Which of my mutations are SNPs? Is there an R package to annotate them?
7.2 years ago by mforde84 ★ 1.4k
0
votes
1
reply
1.7k
views
Comment: C: Which of my mutations are SNPs? Is there an R package to annotate them?
7.2 years ago by mforde84 ★ 1.4k
1
vote
1
reply
8.8k
views
Comment: C: Resources for gene signature creation
7.2 years ago by mforde84 ★ 1.4k
1
vote
1
reply
8.8k
views
Comment: C: Resources for gene signature creation
7.2 years ago by mforde84 ★ 1.4k
232 results • Page 1 of 5
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