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3
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2.1k
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Answer: A: Advice for RNAseq timepoint analysis
7.4 years ago by mforde84 ★ 1.4k
1
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4
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1.7k
views
Consistency of group memberships across variables
membership
updated 7.4 years ago by 27k • written 7.4 years ago by ★ 1.4k
0
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0
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1.7k
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Comment: C: Consistency of group memberships across variables
7.4 years ago by mforde84 ★ 1.4k
0
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1
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1.7k
views
Comment: C: Consistency of group memberships across variables
7.4 years ago by mforde84 ★ 1.4k
0
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1
reply
3.0k
views
Answer: A: ComBat on TCGA RNAseq data generates all NAN
7.4 years ago by mforde84 ★ 1.4k
0
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0
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4.3k
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Comment: C: Software for GO enrichment based on own DEGs and GO annotation.
7.5 years ago by mforde84 ★ 1.4k
0
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0
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4.3k
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Comment: C: Software for GO enrichment based on own DEGs and GO annotation.
7.5 years ago by mforde84 ★ 1.4k
0
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2
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4.3k
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Comment: C: Software for GO enrichment based on own DEGs and GO annotation.
7.5 years ago by mforde84 ★ 1.4k
0
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0
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4.3k
views
Answer: A: Software for GO enrichment based on own DEGs and GO annotation.
7.5 years ago by mforde84 ★ 1.4k
0
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0
replies
1.9k
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Answer: A: How fold change varies through out different microarray platforms?
7.5 years ago by mforde84 ★ 1.4k
0
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0
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4.4k
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Comment: C: Alignment time of TopHat (v.2.1.1) increases while increasing threads (using mul
7.5 years ago by mforde84 ★ 1.4k
1
vote
1
reply
3.0k
views
Comment: C: Adding .txt or .fa extension to UnixExecutable
7.5 years ago by mforde84 ★ 1.4k
3
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2
replies
4.4k
views
Comment: C: Alignment time of TopHat (v.2.1.1) increases while increasing threads (using mul
7.5 years ago by mforde84 ★ 1.4k
1
vote
1
reply
4.4k
views
Comment: C: Alignment time of TopHat (v.2.1.1) increases while increasing threads (using mul
7.5 years ago by mforde84 ★ 1.4k
1
vote
1
reply
3.0k
views
Comment: C: Adding .txt or .fa extension to UnixExecutable
7.5 years ago by mforde84 ★ 1.4k
0
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0
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1.9k
views
Answer: A: How accurate is BWA MEM mapping?
7.5 years ago by mforde84 ★ 1.4k
0
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0
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2.4k
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Answer: A: WGCNA filtering data input
7.5 years ago by mforde84 ★ 1.4k
1
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1
reply
16k
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Answer: A: Obtaining uniquely mapped reads from BWA mem alignment (filtering by q score doe
7.5 years ago by mforde84 ★ 1.4k
0
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0
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2.6k
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Comment: C: question about two factor makeContrasts
7.5 years ago by mforde84 ★ 1.4k
0
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0
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5.2k
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Comment: C: STAR installation make error
7.5 years ago by mforde84 ★ 1.4k
0
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0
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5.2k
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Comment: C: STAR installation make error
7.5 years ago by mforde84 ★ 1.4k
0
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3
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2.6k
views
question about two factor makeContrasts
R edgeR linear model
7.5 years ago by mforde84 ★ 1.4k
0
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1
reply
2.6k
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Comment: C: question about two factor makeContrasts
7.5 years ago by mforde84 ★ 1.4k
0
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1
reply
2.6k
views
Comment: C: question about two factor makeContrasts
7.5 years ago by mforde84 ★ 1.4k
0
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1
reply
4.8k
views
Comment: C: Quick question about analysis of log2 RMA data
7.6 years ago by mforde84 ★ 1.4k
1
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3
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4.8k
views
Quick question about analysis of log2 RMA data
microarray
7.6 years ago by mforde84 ★ 1.4k
0
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0
replies
7.4k
views
Comment: C: STAR alignment, RNA-seq
7.6 years ago by mforde84 ★ 1.4k
1
vote
1
reply
1.6k
views
cross strand correlation in BrU-UV ChIP data
quality control ChIP-Seq
7.6 years ago by mforde84 ★ 1.4k
1
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0
replies
1.6k
views
Comment: C: cross strand correlation in BrU-UV ChIP data
7.6 years ago by mforde84 ★ 1.4k
0
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0
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2.1k
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Comment: C: SNP analysis based on RNAseq data using GATK PIPELINE
7.6 years ago by mforde84 ★ 1.4k
0
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0
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2.1k
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Comment: C: SNP analysis based on RNAseq data using GATK PIPELINE
7.6 years ago by mforde84 ★ 1.4k
1
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0
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2.1k
views
Answer: A: SNP analysis based on RNAseq data using GATK PIPELINE
7.6 years ago by mforde84 ★ 1.4k
1
vote
0
replies
2.3k
views
Answer: A: Help with Samtools
7.6 years ago by mforde84 ★ 1.4k
3
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0
replies
2.2k
views
Comment: C: how to visualize the distribution of 20,000 genes in gene expression data
7.6 years ago by mforde84 ★ 1.4k
0
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0
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8.0k
views
Answer: A: Creating the gene sets for GSEA in R
7.6 years ago by mforde84 ★ 1.4k
2
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0
replies
2.5k
views
Answer: A: Downloading normalized data from GEO
7.6 years ago by mforde84 ★ 1.4k
0
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1
reply
2.2k
views
Comment: C: how to visualize the distribution of 20,000 genes in gene expression data
7.6 years ago by mforde84 ★ 1.4k
1
vote
0
replies
980
views
Sequencing or array databases for metastasis
metastasis
7.6 years ago by mforde84 ★ 1.4k
0
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0
replies
13k
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Comment: C: "Separate enrichment analysis of pathways for up- and downregulated genes"
7.7 years ago by mforde84 ★ 1.4k
0
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1
reply
4.9k
views
Comment: C: How can I find out the Linux version and what is the ftp command to install R an
7.7 years ago by mforde84 ★ 1.4k
0
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0
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6.7k
views
Comment: C: No differentially expressed genes using DESeq2
7.7 years ago by mforde84 ★ 1.4k
0
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0
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2.2k
views
Answer: A: Is it possible/recommended to trim RNA-Seq reads to a specific length
7.7 years ago by mforde84 ★ 1.4k
0
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0
replies
1.8k
views
Answer: A: How can I merge two data frames in R with turning one of them?
7.7 years ago by mforde84 ★ 1.4k
0
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0
replies
1.5k
views
Answer: A: How can I correct skewed distribution of FPKM values?
7.8 years ago by mforde84 ★ 1.4k
1
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0
replies
1.6k
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Answer: A: Microarray or RNA-seq data?
7.8 years ago by mforde84 ★ 1.4k
0
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0
replies
1.9k
views
Comment: C: NGS Sequencing depths
7.8 years ago by mforde84 ★ 1.4k
0
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1
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8.8k
views
Comment: C: Any better ways to filter GATK Mutect2 output?
7.8 years ago by mforde84 ★ 1.4k
0
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0
replies
1.9k
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Comment: C: NGS Sequencing depths
7.8 years ago by mforde84 ★ 1.4k
1
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0
replies
2.8k
views
Comment: C: Differences between Counts and FPKMS
7.8 years ago by mforde84 ★ 1.4k
1
vote
0
replies
2.2k
views
Comment: C: RNA-seq: bias in coverage
7.8 years ago by mforde84 ★ 1.4k
232 results • Page 3 of 5
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