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3
votes
1
reply
2.2k
views
Answer:
A: Finding Ultraconserved elements between human and zebrafish
8.4 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
3.3k
views
Answer:
A: How to visualize read depth based on genomic location
8.5 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
1.5k
views
Histone modifications data on embryonic stem cells to differentiated stages
ESC
H3K4me1
H3K4me3
8.5 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
3.1k
views
Comment:
C: Predict if the mutation is activating or deactivating
8.5 years ago by
Chirag Nepal
★ 2.4k
2
votes
0
replies
1.7k
views
4C/5C Interaction Data from RoadMap
Long range interaction
4c
5C
HiC
8.5 years ago by
Chirag Nepal
★ 2.4k
1
vote
1
reply
1.7k
views
Comment:
C: lncRNA annoatation in common crap
8.6 years ago by
Chirag Nepal
★ 2.4k
1
vote
0
replies
1.7k
views
Answer:
A: lncRNA annoatation in common crap
8.6 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
3.8k
views
Comment:
C: How can I increase the number of peaks using macs2 peak caller?
8.6 years ago by
Chirag Nepal
★ 2.4k
2
votes
1
reply
7.2k
views
Answer:
A: Copy Number Variation Steps (CNVs) - detection step by step
8.6 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
1.6k
views
Answer:
A: microRNA visulaization data track
8.8 years ago by
Chirag Nepal
★ 2.4k
1
vote
1
reply
1.6k
views
Comment:
C: Genome Music: Most significant hits lack p-value
8.8 years ago by
Chirag Nepal
★ 2.4k
2
votes
3
replies
1.6k
views
Genome Music: Most significant hits lack p-value
Genome Music
p-value
updated 8.8 years ago by
Chris Miller
22k • written 8.8 years ago by
Chirag Nepal
★ 2.4k
1
vote
2
replies
12k
views
Answer:
A: 3' Bias in RNASEQ data
8.8 years ago by
Chirag Nepal
★ 2.4k
1
vote
0
replies
4.9k
views
Comment:
C: Bioinformatics analyses hall of shame
8.8 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
3.6k
views
Answer:
A: I wish to compare one particular gene of the species with that of other species
8.8 years ago by
Chirag Nepal
★ 2.4k
6
votes
0
replies
4.0k
views
Answer:
A: help with career decisions: should a PhD in genetics go for another master in bi
8.9 years ago by
Chirag Nepal
★ 2.4k
5
votes
0
replies
5.5k
views
Answer:
A: Europe: Non-Paid Bioinformatics Internships/Training
8.9 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
25k
views
Comment:
C: Tutorial: Analyze exome Copy number variation (CNV) in single patient or in popu
8.9 years ago by
Chirag Nepal
★ 2.4k
1
vote
0
replies
1.7k
views
Answer:
A: reads from miRNA-seq
8.9 years ago by
Chirag Nepal
★ 2.4k
1
vote
1
reply
2.0k
views
Answer:
A: nearby gene and miRNA of non coding RNA
8.9 years ago by
Chirag Nepal
★ 2.4k
2
votes
0
replies
2.3k
views
Forum:
High throughput sequencing (RNA-seq, Chip-seq, CAGE-seq) coverage tracks from multiple species available for viewing on UCSC?
coverage-tracks
UCSC-tracks
Visualization
updated 23 months ago by
Ram
44k • written 8.9 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
22k
views
Comment:
C: Where Can I Find Mutation Databases Specialized In Cancer?
8.9 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
55k
views
Comment:
C: Visualization of ChIP-seq data using Heatmaps (Updated: 03/10/16)
8.9 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
1.8k
views
Answer:
A: Two UCSC bedgraph tracks next to each other
8.9 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
4.0k
views
Comment:
C: Gene Ontology without enrichment analysis
9.0 years ago by
Chirag Nepal
★ 2.4k
1
vote
1
reply
4.0k
views
Answer:
A: Gene Ontology without enrichment analysis
9.0 years ago by
Chirag Nepal
★ 2.4k
2
votes
1
reply
55k
views
Answer:
A: Visualization of ChIP-seq data using Heatmaps
9.0 years ago by
Chirag Nepal
★ 2.4k
1
vote
0
replies
2.6k
views
Answer:
A: CpG island identification
9.0 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
1.9k
views
Answer:
A: Score bit in multiple BLAST
9.0 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
7.3k
views
Comment:
C: Plotting copy number varation: amplification and deletion data from GISTIC
9.1 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
2.6k
views
Comment:
C: Pathway enrichment for Copy Number Alterations (CNA)
9.1 years ago by
Chirag Nepal
★ 2.4k
1
vote
2
replies
2.6k
views
Pathway enrichment for Copy Number Alterations (CNA)
Genome-Music
CNV
CNA
updated 2.6 years ago by
Ram
44k • written 9.1 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
2.0k
views
Histone Chip-seq (H3K4me3) data from normal/tumor pair.
Tumor-Normal
ChIP-Seq
H3K4me3
updated 2.6 years ago by
Ram
44k • written 9.1 years ago by
Chirag Nepal
★ 2.4k
7
votes
2
replies
2.5k
views
News:
Annotation of Zebrafish pri-miRNAs promoters and CAGE-seq detected active Drosha processing events.
Drosha-processing
moRNAs
pri-miRNAs
zebrafish
updated 2.6 years ago by
Ram
44k • written 9.2 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
4.3k
views
Comment:
C: Phastcons score interpretaion
9.1 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
2.5k
views
Comment:
C: Annotation of Zebrafish pri-miRNAs promoters and CAGE-seq detected active Drosha
9.2 years ago by
Chirag Nepal
★ 2.4k
0
votes
2
replies
5.1k
views
Comment:
C: Significance of reads mapping to Viruses - FusionCatcher
9.2 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
5.1k
views
Comment:
C: Significance of reads mapping to Viruses - FusionCatcher
9.2 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
6.4k
views
Comment:
C: H3K4Me3 ChIP-Seq signal at promoter
9.2 years ago by
Chirag Nepal
★ 2.4k
2
votes
2
replies
6.4k
views
Answer:
A: H3K4Me3 ChIP-Seq signal at promoter
9.2 years ago by
Chirag Nepal
★ 2.4k
1
vote
0
replies
2.9k
views
Identify list of reoccurring genes from CNV using GISTIC
CNV
GISTIC
copy-number
updated 2.6 years ago by
Ram
44k • written 9.3 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
3.1k
views
Answer:
A: all the SV type of breakdancer output are ITX is that correct?
9.3 years ago by
Chirag Nepal
★ 2.4k
2
votes
2
replies
2.6k
views
genome music bmr calc-covg [Run in parallel]
coverage
music
updated 2.5 years ago by
Ram
44k • written 9.3 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
4.4k
views
Comment:
C: Copy number variation from BAM and VCF files?
9.3 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
4.4k
views
Answer:
Answer: Copy number variation from BAM and VCF files?
updated 2.5 years ago by
Ram
44k • written 9.3 years ago by
Chirag Nepal
★ 2.4k
2
votes
0
replies
3.8k
views
Comment:
C: Normalization in RNA-seq
9.3 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
1.7k
views
Answer:
A: microRNAseq data: is this normal or weird?
9.3 years ago by
Chirag Nepal
★ 2.4k
0
votes
1
reply
3.2k
views
Comment:
C: breakdancer - cfg creation and chi square problem
9.3 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
3.4k
views
Comment:
C: Bam2Cfg.Pl And Breakdancer
9.3 years ago by
Chirag Nepal
★ 2.4k
0
votes
0
replies
2.3k
views
Comment:
Comment: How to Convert SNP's that produced from Varscan into 0,1,2 ?
updated 2.5 years ago by
Ram
44k • written 9.4 years ago by
Chirag Nepal
★ 2.4k
308 results • Page
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