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0
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237
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Comment: Comment: Length Polymorphism using long read Nanopore
4 weeks ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
237
views
Length Polymorphism using long read Nanopore
genotyping nanopore
4 weeks ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
365
views
Comment: Comment: Issues with Minimap2 and ONT (Nanopore)
4 months ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
365
views
Issues with Minimap2 and ONT (Nanopore)
minimap nanopore
4 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
756
views
Comment: Comment: Development plan for a bioinformatics database developer/coder
9 months ago by pixie@bioinfo ★ 1.5k
1
vote
3
replies
756
views
Forum: Development plan for a bioinformatics database developer/coder
developer
9 months ago by pixie@bioinfo ★ 1.5k
1
vote
2
replies
383
views
Internal controls/ Reference Samples for Nanopore
nanopore
updated 10 months ago by ★ 2.6k • written 10 months ago by ★ 1.5k
0
votes
0
replies
892
views
Comment: Comment: Regarding using a "pseudo reference genome" for aligning short reads
10 months ago by pixie@bioinfo ★ 1.5k
0
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1
reply
1.7k
views
Comment: Comment: WGCNA kME vs kWithin Hub Gene Disparities
12 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
315
views
Identifying Multipartite viruses (Viral Bioinformatics)
genomics
12 months ago by pixie@bioinfo ★ 1.5k
2
votes
3
replies
892
views
Regarding using a "pseudo reference genome" for aligning short reads
genomics
10 months ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
692
views
Comment: Comment: How to proceed after Kraken2 analysis
13 months ago by pixie@bioinfo ★ 1.5k
3
votes
3
replies
692
views
How to proceed after Kraken2 analysis
rnaseq kraken
updated 13 months ago by ★ 2.6k • written 13 months ago by ★ 1.5k
31
votes
11
replies
7.1k
views
8 follow
Basics Of Systems Biology...
network
updated 17 months ago by • 0 • written 14.4 years ago by ★ 1.5k
2
votes
1
reply
690
views
Sequence statistics to report viruses (or bacteria and fungi) using Nanopore for diagnostic purpose
nanopore
updated 21 months ago by 7.0k • written 21 months ago by ★ 1.5k
8
votes
4
replies
1.2k
views
Forum: Implementing FAIR data principles to a bioinformatics lab
data
updated 22 months ago by 22k • written 22 months ago by ★ 1.5k
0
votes
1
reply
542
views
Trimming SSR (repetitive primer) sequences
genomics
updated 2.1 years ago by 148k • written 2.1 years ago by ★ 1.5k
0
votes
3
replies
817
views
Calculate distribution of reads over the reference genome
ngs
updated 2.2 years ago by 21k • written 2.2 years ago by ★ 1.5k
1
vote
2
replies
694
views
Identifying reliable regions of reference genomes
snp genomics
updated 2.3 years ago by ★ 2.1k • written 2.3 years ago by ★ 1.5k
0
votes
1
reply
778
views
Comment: Comment: Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
2.4 years ago by pixie@bioinfo ★ 1.5k
0
votes
3
replies
778
views
Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
Illumina mini-seq
updated 2.4 years ago by 148k • written 2.4 years ago by ★ 1.5k
0
votes
0
replies
729
views
Forum: Bioinformatics for understanding cancer and other diseases
cancer omics
updated 2.0 years ago by 44k • written 2.6 years ago by ★ 1.5k
0
votes
0
replies
445
views
pysam fetch alignments corresponding to a taxid
pysam samtools
2.6 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
679
views
Comment: Comment: How to calculate p-value for Network Data (Cluster Detection)
2.7 years ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
679
views
How to calculate p-value for Network Data (Cluster Detection)
network correlation
2.7 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
455
views
Diagnostic Plots for SNP quality assesment
vcf
2.8 years ago by pixie@bioinfo ★ 1.5k
2
votes
1
reply
873
views
VCF file, calculate depth per sample
vcf bcftools
updated 2.9 years ago by ▴ 520 • written 2.9 years ago by ★ 1.5k
0
votes
1
reply
714
views
Comment: Comment: Identify predicted TF targets by binding motif
2.9 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
857
views
Problem with VCF format while using "VariantAnnotation" R package
vcf
updated 2.9 years ago by ★ 1.6k • written 2.9 years ago by ★ 1.5k
8
votes
11
replies
7.1k
views
6 follow
Heatmap In R-Wgcna-->Error While Plotting Tom
r heatmap
updated 2.9 years ago by • 0 • written 11.4 years ago by ★ 1.5k
0
votes
0
replies
475
views
Information about Genotyping by Sequencing (GBS)
snp
updated 3.1 years ago by 148k • written 3.1 years ago by ★ 1.5k
0
votes
0
replies
687
views
Create combined CpG and non-CpG bedgraphs for DNA methylation using Bismark
methylation
3.3 years ago by pixie@bioinfo ★ 1.5k
2
votes
2
replies
834
views
R programming: basics to challenging
R
updated 3.4 years ago by 86k • written 3.4 years ago by ★ 1.5k
0
votes
1
reply
1.5k
views
Plots for Correlation between two dataframes by row
R
updated 3.5 years ago by 88k • written 3.5 years ago by ★ 1.5k
0
votes
2
replies
749
views
Ideas to represent RNA-seq expression profile (Z-scores) and the significance level at the same time
R RNAseq
updated 3.5 years ago by ★ 2.9k • written 3.5 years ago by ★ 1.5k
2
votes
9
replies
24k
views
7 follow
HISAT error: Encountered internal HISAT2 exception (#1)
RNA-Seq
updated 3.6 years ago by • 0 • written 7.5 years ago by ★ 1.5k
0
votes
1
reply
1.2k
views
Segmentation fault with HOMER
homer HiC
updated 2.9 years ago by • 0 • written 3.8 years ago by ★ 1.5k
2
votes
3
replies
2.6k
views
Forum: MOOC for AI and Machine learning for Bioinformatics
ML AI
updated 21 months ago by 44k • written 4.3 years ago by ★ 1.5k
0
votes
1
reply
609
views
P value for test for proportions and random sampling
R
3.9 years ago by pixie@bioinfo ★ 1.5k
2
votes
0
replies
1.4k
views
Answer: A: Self Organizing Maps for RNA-seq data
updated 4.1 years ago by 148k • written 4.1 years ago by ★ 1.5k
4
votes
3
replies
1.4k
views
Self Organizing Maps for RNA-seq data
RNA-Seq
4.1 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
1.4k
views
Comment: C: Self Organizing Maps for RNA-seq data
4.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
1.9k
views
Comment: C: Using Deeptool for profile plots
4.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
1.9k
views
Comment: C: Using Deeptool for profile plots
4.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
1.9k
views
Comment: C: Using Deeptool for profile plots
4.1 years ago by pixie@bioinfo ★ 1.5k
2
votes
5
replies
1.9k
views
Using Deeptool for profile plots
deeptools
4.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
817
views
Issue with Diffreps
ChIP-Seq
4.1 years ago by pixie@bioinfo ★ 1.5k
4
votes
2
replies
2.8k
views
Bismark: bedgraph to bigwig for DNA methylation
methylation
updated 4.1 years ago by ▴ 20 • written 4.3 years ago by ★ 1.5k
0
votes
0
replies
675
views
Ideas Regarding TF regulatory network
network
4.1 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
1.8k
views
CUT&RUN analysis pipeline
alignment sequencing
updated 4.2 years ago by 13k • written 4.2 years ago by ★ 1.5k
259 results • Page 1 of 6
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