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0
votes
1
reply
3.5k
views
Comment:
C: Why does cufflinks split this transcript?
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.7k
views
Comment:
C: SOAP aligner removes samfile headers
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.7k
views
Comment:
C: SOAP aligner removes samfile headers
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
4.6k
views
Comment:
C: Parse FASTQC data
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
4.6k
views
Answer:
A: Parse FASTQC data
7.0 years ago by
Matteo Schiavinato
★ 3.6k
2
votes
1
reply
2.7k
views
Answer:
C: SOAP aligner removes samfile headers
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.7k
views
Comment:
C: SOAP aligner removes samfile headers
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
3.5k
views
Comment:
C: Why does cufflinks split this transcript?
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
4.5k
views
Comment:
C: Calculate TPM from cuffnorm count data
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
4.5k
views
Comment:
C: Calculate TPM from cuffnorm count data
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.7k
views
Comment:
C: SOAP aligner removes samfile headers
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
4.5k
views
Answer:
A: Calculate TPM from cuffnorm count data
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
8.1k
views
Comment:
C: bwa mem has more MAPQ values as 0 and 60
7.0 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
1
reply
8.1k
views
Comment:
C: bwa mem has more MAPQ values as 0 and 60
7.0 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
1
reply
3.5k
views
Comment:
C: Why does cufflinks split this transcript?
7.0 years ago by
Matteo Schiavinato
★ 3.6k
2
votes
1
reply
8.1k
views
Answer:
A: bwa mem has more MAPQ values as 0 and 60
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
6.9k
views
Comment:
C: stringtie cannot recognize Gencode GTF
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.6k
views
Comment:
C: How to get jbrowse to read tracks from files outside of the root of the homepage
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.6k
views
Comment:
C: How to get jbrowse to read tracks from files outside of the root of the homepage
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
2.1k
views
Comment:
C: Questions about mapping paired-end data by BWA
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
6.9k
views
Comment:
C: stringtie cannot recognize Gencode GTF
7.0 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
0
replies
2.7k
views
Comment:
C: Why does read with "read paired" flag not have mate in bam file?
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
6.9k
views
Comment:
C: stringtie cannot recognize Gencode GTF
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
4.2k
views
Comment:
C: Mismatch issue in bwa
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
2.5k
views
Comment:
C: Is Pindel slow for everyone, or should I review my command?
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
5.2k
views
Answer:
A: Cutoff for TPM value
7.0 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
1
reply
4.2k
views
Answer:
A: Mismatch issue in bwa
7.0 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
3.4k
views
Comment:
C: Need help understanding Pindel outputs
7.1 years ago by
Matteo Schiavinato
★ 3.6k
4
votes
0
replies
11k
views
Answer:
A: Hard vs soft masked references while aligning with STAR
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
2.1k
views
Comment:
C: HTSeq special counters occur at top and bottom of output file
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
4.0k
views
Comment:
C: Convert an altered sam file into a bam file
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
2.9k
views
Comment:
C: RNA seq- without a control
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.9k
views
Comment:
C: RNA seq- without a control
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.9k
views
Comment:
C: RNA seq- without a control
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.9k
views
Comment:
C: RNA seq- without a control
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
4.2k
views
Answer:
A: Chimeric alignment with minimap2
7.1 years ago by
Matteo Schiavinato
★ 3.6k
2
votes
1
reply
1.4k
views
Answer:
A: Same transcript appear on different scaffolds. Why?
7.1 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
1
reply
4.0k
views
Comment:
C: Convert an altered sam file into a bam file
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
2.5k
views
Comment:
C: DESeq2, function not found
7.1 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
1
reply
2.1k
views
Comment:
C: HTSeq special counters occur at top and bottom of output file
7.1 years ago by
Matteo Schiavinato
★ 3.6k
4
votes
0
replies
1.5k
views
Answer:
A: Does anyone know what exactly 1/2 mean?
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
1.7k
views
Comment:
C: How do I tell bwa to map only unmapped portion of the read for supplementary ali
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
1.7k
views
Comment:
C: How do I tell bwa to map only unmapped portion of the read for supplementary ali
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
4
replies
1.7k
views
How do I tell bwa to map only unmapped portion of the read for supplementary alignments?
bwa
alignment
supplementary
SAM
chimeric
updated 7.1 years ago by
Pierre Lindenbaum
164k • written 7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
0
replies
1.6k
views
Comment:
C: Trimmomatic non-conventional adaptors and error
7.1 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
1
reply
2.5k
views
Comment:
C: How Hisat Works
7.1 years ago by
Matteo Schiavinato
★ 3.6k
2
votes
1
reply
2.5k
views
Answer:
A: How Hisat Works
7.1 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
0
replies
1000
views
Comment:
C: Suggestions on open databases
7.1 years ago by
Matteo Schiavinato
★ 3.6k
1
vote
0
replies
1.4k
views
Comment:
C: varscan copy number error
7.1 years ago by
Matteo Schiavinato
★ 3.6k
0
votes
1
reply
2.2k
views
Comment:
C: pairwise comparison in R
7.1 years ago by
Matteo Schiavinato
★ 3.6k
600 results • Page
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