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1
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0
replies
2.2k
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Comment:
C: REsequencing Genome Assembly and Functional Gene annotation workflow?
7.3 years ago by
vmicrobio
▴ 290
1
vote
1
reply
2.2k
views
Answer:
A: REsequencing Genome Assembly and Functional Gene annotation workflow?
7.4 years ago by
vmicrobio
▴ 290
1
vote
0
replies
2.0k
views
Answer:
A: Human in NCBI Genomes
7.4 years ago by
vmicrobio
▴ 290
0
votes
0
replies
1.3k
views
Answer:
A: coding potential tool for de novo assembled transcripts for plant species
7.4 years ago by
vmicrobio
▴ 290
0
votes
1
reply
2.2k
views
Comment:
C: REsequencing Genome Assembly and Functional Gene annotation workflow?
7.4 years ago by
vmicrobio
▴ 290
0
votes
0
replies
2.0k
views
Comment:
C: How to submit bacterial genomes to the database?
7.4 years ago by
vmicrobio
▴ 290
1
vote
0
replies
3.3k
views
Comment:
C: When should you de novo assemble a whole-genome, and when should you simply alig
7.4 years ago by
vmicrobio
▴ 290
1
vote
0
replies
2.0k
views
Answer:
A: How to submit bacterial genomes to the database?
7.4 years ago by
vmicrobio
▴ 290
1
vote
1
reply
3.3k
views
Comment:
C: When should you de novo assemble a whole-genome, and when should you simply alig
7.4 years ago by
vmicrobio
▴ 290
0
votes
2
replies
1.3k
views
species abundacy calculation
blast
GRAMMy
species abundancy
updated 7.4 years ago by
Biostar
20 • written 7.5 years ago by
vmicrobio
▴ 290
0
votes
1
reply
2.1k
views
how do I get a wonderful genome draft? : gap closed step
draft genome
gap closed
consensus
7.4 years ago by
vmicrobio
▴ 290
0
votes
0
replies
6.2k
views
Comment:
C: How to plot venn diagram from vcf-compare output ?
7.4 years ago by
vmicrobio
▴ 290
0
votes
0
replies
1.2k
views
Answer:
A: Phylogenetic analysis of human genomes
7.4 years ago by
vmicrobio
▴ 290
0
votes
0
replies
2.5k
views
Comment:
C: Alignment of mutli-contig fasta files
7.5 years ago by
vmicrobio
▴ 290
0
votes
1
reply
2.5k
views
Answer:
A: Alignment of mutli-contig fasta files
7.5 years ago by
vmicrobio
▴ 290
0
votes
0
replies
14k
views
Answer:
A: How to assemble contigs?
7.5 years ago by
vmicrobio
▴ 290
0
votes
0
replies
1.3k
views
Comment:
C: species abundacy calculation
7.5 years ago by
vmicrobio
▴ 290
0
votes
0
replies
3.1k
views
Answer:
A: Variant calling using samtools
7.5 years ago by
vmicrobio
▴ 290
0
votes
0
replies
1.2k
views
negative control in hla locus amplification
Proton
hla
genDX
7.6 years ago by
vmicrobio
▴ 290
0
votes
0
replies
1.2k
views
Variant calling on sample from both Illumina and Proton technology
variant calling
Proton
floworder
7.6 years ago by
vmicrobio
▴ 290
1
vote
0
replies
7.7k
views
Comment:
C: Isolating reads from specific region from bam file
7.7 years ago by
vmicrobio
▴ 290
0
votes
0
replies
3.7k
views
Comment:
C: ion torrent read mapping and variant caller
7.7 years ago by
vmicrobio
▴ 290
0
votes
0
replies
2.0k
views
Comment:
C: MIRA assembly error
7.7 years ago by
vmicrobio
▴ 290
0
votes
1
reply
3.7k
views
Comment:
C: ion torrent read mapping and variant caller
7.7 years ago by
vmicrobio
▴ 290
0
votes
0
replies
3.7k
views
Answer:
A: ion torrent read mapping and variant caller
7.7 years ago by
vmicrobio
▴ 290
2
votes
1
reply
1.3k
views
any recommendations about public computer clusters?
computer cluster
slurm
7.7 years ago by
vmicrobio
▴ 290
2
votes
0
replies
6.0k
views
Answer:
A: Extract the mapped contig sequences from SAM/BAM file
7.7 years ago by
vmicrobio
▴ 290
0
votes
0
replies
4.3k
views
Comment:
C: Different alignments rates with bwa mem (0%) and bowtie2 (82%)
7.8 years ago by
vmicrobio
▴ 290
0
votes
1
reply
12k
views
Comment:
C: BAM to BIGWIG
7.8 years ago by
vmicrobio
▴ 290
1
vote
1
reply
12k
views
Comment:
C: BAM to BIGWIG
7.8 years ago by
vmicrobio
▴ 290
2
votes
1
reply
12k
views
Comment:
C: BAM to BIGWIG
7.8 years ago by
vmicrobio
▴ 290
0
votes
0
replies
1.4k
views
Comment:
C: How can I experimentally validate LOH?
7.8 years ago by
vmicrobio
▴ 290
0
votes
1
reply
4.6k
views
Answer:
A: Contamination in assembly
7.8 years ago by
vmicrobio
▴ 290
0
votes
0
replies
3.3k
views
Answer:
A: Aligning de-novo assembly to reference strain genome
7.8 years ago by
vmicrobio
▴ 290
2
votes
3
replies
1.8k
views
how to determine seed if sample share a seed <=value
bwa
seed
alignment
sequence
7.8 years ago by
vmicrobio
▴ 290
0
votes
1
reply
1.8k
views
Comment:
A: how to determine seed if sample share a seed <=value
7.8 years ago by
vmicrobio
▴ 290
0
votes
0
replies
1.7k
views
Answer:
A: Compare genome of eight mycobacterial strain using ACT
7.9 years ago by
vmicrobio
▴ 290
1
vote
0
replies
99k
views
Comment:
C: merge large amount of fastq files into a single one
7.9 years ago by
vmicrobio
▴ 290
0
votes
0
replies
3.8k
views
Answer:
A: Are There Any Databases/Knowledge Bases Or Other Resources Concerning Bacterial
7.9 years ago by
vmicrobio
▴ 290
0
votes
0
replies
5.4k
views
Answer:
A: 16S rRNA seq software
7.9 years ago by
vmicrobio
▴ 290
8
votes
11
replies
5.4k
views
6 follow
16S rRNA seq software
RNA-Seq
metagenomic
7.9 years ago by
vmicrobio
▴ 290
5
votes
2
replies
1.7k
views
How to simply filter a xml file?
blast
filter
xml
updated 7.9 years ago by
Alex Reynolds
36k • written 7.9 years ago by
vmicrobio
▴ 290
5
votes
5
replies
5.1k
views
tabular blast output file
alignment
updated 7.9 years ago by
st.ph.n
★ 2.7k • written 7.9 years ago by
vmicrobio
▴ 290
0
votes
0
replies
5.1k
views
Answer:
A: tabular blast output file
7.9 years ago by
vmicrobio
▴ 290
0
votes
0
replies
3.0k
views
Answer:
A: Read filtering strategy and BWA
7.9 years ago by
vmicrobio
▴ 290
0
votes
0
replies
9.6k
views
Comment:
C: BAM to FASTQ
7.9 years ago by
vmicrobio
▴ 290
0
votes
1
reply
9.6k
views
Answer:
A: BAM to FASTQ
7.9 years ago by
vmicrobio
▴ 290
2
votes
0
replies
8.2k
views
Answer:
A: What is default paprameter of BWA mem mapping
7.9 years ago by
vmicrobio
▴ 290
0
votes
0
replies
5.2k
views
Comment:
C: Mapping scaffolds to another reference genome
7.9 years ago by
vmicrobio
▴ 290
0
votes
1
reply
5.2k
views
Answer:
A: Mapping scaffolds to another reference genome
7.9 years ago by
vmicrobio
▴ 290
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