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5
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4
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6.1k
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Correct GC bias using read counts and Loess regression method
loess GC bias GC content read counts
updated 5.7 years ago by ▴ 130 • written 7.8 years ago by ▴ 30
0
votes
0
replies
1.1k
views
HMM for detecting CNVs from read count signal
readcount cnv hmm R
5.8 years ago by fatima.m.zare ▴ 30
0
votes
1
reply
4.2k
views
Comment: C: How can I split the soft clipped reads and map the splitted reads again.
6.6 years ago by fatima.m.zare ▴ 30
5
votes
5
replies
4.2k
views
How can I split the soft clipped reads and map the splitted reads again.
soft clipped reads. split reads unmapped reads
updated 6.6 years ago by ★ 2.9k • written 6.6 years ago by ▴ 30
2
votes
3
replies
3.2k
views
calculate mappability score for each window
mappability score bias mappability bias
updated 7.4 years ago by ▴ 220 • written 7.9 years ago by ▴ 30
0
votes
0
replies
6.1k
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Comment: C: Correct GC bias using read counts and Loess regression method
7.8 years ago by fatima.m.zare ▴ 30
0
votes
0
replies
11k
views
Comment: C: Compute Binned Gc-Normalized Read Counts From Bam File
7.8 years ago by fatima.m.zare ▴ 30
0
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0
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3.2k
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Comment: C: calculate mappability score for each window
7.9 years ago by fatima.m.zare ▴ 30
0
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0
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2.2k
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Comment: C: Mappability calculation after mapping with Bowtie2
7.9 years ago by fatima.m.zare ▴ 30
0
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0
replies
2.8k
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Comment: C: Regions of extreme GC content
7.9 years ago by fatima.m.zare ▴ 30
0
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0
replies
2.8k
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Comment: C: Regions of extreme GC content
7.9 years ago by fatima.m.zare ▴ 30
0
votes
0
replies
11k
views
Comment: C: Compute Binned Gc-Normalized Read Counts From Bam File
7.9 years ago by fatima.m.zare ▴ 30
0
votes
1
reply
2.8k
views
Comment: C: Regions of extreme GC content
7.9 years ago by fatima.m.zare ▴ 30
0
votes
1
reply
2.8k
views
Comment: C: Regions of extreme GC content
updated 7.9 years ago by 147k • written 7.9 years ago by ▴ 30
0
votes
1
reply
2.8k
views
Comment: C: Regions of extreme GC content
7.9 years ago by fatima.m.zare ▴ 30
0
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0
replies
1.8k
views
Comment: C: purify tumor samples and remove normal cells
8.0 years ago by fatima.m.zare ▴ 30
4
votes
6
replies
1.8k
views
purify tumor samples and remove normal cells
prurify tumor whole exome sequencing
updated 8.0 years ago by ▴ 310 • written 8.0 years ago by ▴ 30
0
votes
0
replies
1.8k
views
Comment: C: purify tumor samples and remove normal cells
8.0 years ago by fatima.m.zare ▴ 30
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