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67
votes
15
replies
34k
views
14 follow
Rna-Seq Pipeline
pipeline next-gen-sequencing rna rna-seq
updated 18 months ago by 44k • written 14.5 years ago by 24k
328
votes
54
replies
68k
views
45 follow
What Tools/Libraries Do You Use To Visualize Genomic Feature Data?
genome visualization
updated 12 months ago by 44k • written 14.7 years ago by 24k
8
votes
2
replies
2.4k
views
How to run vg giraffe for sv genotyping?
vg
updated 3.3 years ago by ▴ 470 • written 3.4 years ago by 24k
102
votes
44
replies
9.7k
views
22 follow
What Are Numbers Every Bioinformatician Should Know?
knowledge career
updated 21 months ago by 44k • written 11.3 years ago by 24k
4
votes
2
replies
16k
views
Comment: C: Samtools Filter Reads Cigar Field
updated 3.9 years ago by 44k • written 11.3 years ago by 24k
3
votes
0
replies
10k
views
Answer: C: Changing Chromosome Notation On Vcf
updated 4.3 years ago by 12k • written 11.1 years ago by 24k
6
votes
1
reply
66k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 12.6 years ago by 24k
9
votes
1
reply
66k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 12.6 years ago by 24k
6
votes
0
replies
66k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 12.5 years ago by 24k
78
votes
2
replies
66k
views
Answer: A: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 13.7 years ago by 24k
13
votes
0
replies
66k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.5 years ago by 44k • written 13.7 years ago by 24k
4
votes
1
reply
147k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 4.7 years ago by 44k • written 10.3 years ago by 24k
0
votes
0
replies
6.5k
views
Comment: C: RNA-seq analysis for Ion Proton Transcriptome data - tophat2 error
updated 4.9 years ago by 44k • written 10.5 years ago by 24k
1
vote
1
reply
3.4k
views
Answer: A: Adjusting for Age in GWAS where case and control are not age matched.
updated 4.9 years ago by 44k • written 10.5 years ago by 24k
4
votes
0
replies
2.0k
views
Answer: A: Rearrange a table
updated 4.9 years ago by 44k • written 10.5 years ago by 24k
0
votes
0
replies
2.8k
views
Answer: A: csfasta malformed qualities
updated 4.9 years ago by 44k • written 10.5 years ago by 24k
9
votes
2
replies
12k
views
Answer: A: Bwa-Meth: Align And Tabulate Bs-Seq Reads
updated 4.9 years ago by 44k • written 10.5 years ago by 24k
1
vote
0
replies
5.0k
views
Answer: A: Fast search for many patterns
updated 4.9 years ago by 44k • written 10.5 years ago by 24k
4
votes
0
replies
6.0k
views
Answer: A: EMBOSS Needle: Read sequences from stdin
updated 4.9 years ago by 44k • written 10.5 years ago by 24k
3
votes
1
reply
2.4k
views
Answer: C: equivalent of bash eval in R
updated 4.9 years ago by 44k • written 10.6 years ago by 24k
4
votes
2
replies
5.4k
views
Answer: A: Which tool to use to run a PCA on a microarray dataset to select the most releva
updated 4.9 years ago by 44k • written 10.6 years ago by 24k
1
vote
1
reply
7.2k
views
Answer: A: How To Calculate Power For Genome Wide Methylation Array Data, Like Illumina 27K
updated 4.9 years ago by 44k • written 11.1 years ago by 24k
3
votes
0
replies
6.4k
views
Comment: C: Transcription Factors <--> Regulated Genes Database
updated 4.9 years ago by 44k • written 11.2 years ago by 24k
4
votes
2
replies
7.3k
views
Answer: A: Interleaving Records From More Than One Fasta File
updated 4.9 years ago by 44k • written 11.7 years ago by 24k
2
votes
1
reply
4.1k
views
Answer: A: Is There A Rare Variant Burden Test That Corrects For Gene Length?
updated 4.9 years ago by 44k • written 11.7 years ago by 24k
0
votes
0
replies
9.7k
views
Comment: C: Python: Finding Gene Closest To A Given Location
updated 5.0 years ago by 44k • written 12.0 years ago by 24k
3
votes
1
reply
9.7k
views
Answer: A: Python: Finding Gene Closest To A Given Location
updated 5.0 years ago by 44k • written 12.1 years ago by 24k
0
votes
0
replies
6.5k
views
Comment: C: How To Obtain Intron And Utr Info From Gff File?
updated 5.0 years ago by 44k • written 13.0 years ago by 24k
0
votes
0
replies
23k
views
Comment: C: Bed File With Introns Only
updated 5.0 years ago by 44k • written 13.1 years ago by 24k
0
votes
0
replies
1.9k
views
Comment: C: Intersection Of Processed Microarray Data: P-Values Commensurability
updated 5.0 years ago by 44k • written 13.2 years ago by 24k
7
votes
5
replies
13k
views
Answer: A: Get Snp Position From A Python Interface.
updated 5.0 years ago by 44k • written 11.9 years ago by 24k
1
vote
0
replies
14k
views
Comment: C: Chromosome Plot In R
updated 5.0 years ago by 44k • written 13.3 years ago by 24k
1
vote
4
replies
21k
views
Answer: A: Probability Of Gene List Overlap
updated 5.0 years ago by 44k • written 12.9 years ago by 24k
6
votes
0
replies
4.2k
views
Answer: A: Bed Files Comparison
updated 5.0 years ago by 44k • written 13.3 years ago by 24k
1
vote
2
replies
7.2k
views
Comment: C: Pat Schloss of Mothur uses this
updated 5.0 years ago by 44k • written 10.1 years ago by 24k
0
votes
0
replies
8.2k
views
Comment: C: virtualenv - running Python based software in isolation
updated 5.0 years ago by 44k • written 10.3 years ago by 24k
2
votes
0
replies
4.6k
views
Comment: C: How can I learn cluster computing?
updated 5.1 years ago by 44k • written 10.0 years ago by 24k
3
votes
1
reply
3.8k
views
Answer: Answer: What bioinformatics tools/software do not get enough recognition?
updated 2.8 years ago by 44k • written 10.1 years ago by 24k
38
votes
1
reply
57k
views
Answer: Answer: Difference between Hard Clip and Soft Clip in Samtools CIGAR string
updated 2.9 years ago by 44k • written 10.3 years ago by 24k
2
votes
0
replies
4.1k
views
Answer: A: Co-occurring TF motifs in peak file from ChIP-seq experiment
updated 5.1 years ago by 44k • written 10.3 years ago by 24k
5
votes
1
reply
11k
views
Answer: A: Mm9 Vs Mm10 [Why Is The Information Less In New Genome Build]
updated 5.1 years ago by 44k • written 12.3 years ago by 24k
1
vote
0
replies
13k
views
Comment: C: How To Read A Bigwig File Using Python
updated 5.1 years ago by 44k • written 12.7 years ago by 24k
0
votes
0
replies
9.8k
views
Comment: C: What Does Bwa'S '-N' Parameter Mean?
updated 5.2 years ago by 44k • written 12.9 years ago by 24k
0
votes
0
replies
16k
views
Comment: C: Wiggle File 2 Bed File
updated 5.2 years ago by 44k • written 12.9 years ago by 24k
1
vote
0
replies
10k
views
Comment: C: Cutadapt Or Fastx Clipper
updated 5.2 years ago by 44k • written 13.1 years ago by 24k
0
votes
0
replies
7.5k
views
Comment: C: What Depth Of Coverage For Whole Genome Snp Calling?
updated 5.2 years ago by 44k • written 13.2 years ago by 24k
3
votes
0
replies
4.6k
views
Comment: C: Does Pre-Publishing Open Source Algorithms Hurt Chances Of Getting Published?
updated 5.2 years ago by 44k • written 13.2 years ago by 24k
12
votes
10
replies
15k
views
Answer: A: Statistical Measure Of Biological Significance For Overlapping Genomic Regions
updated 5.2 years ago by 44k • written 13.5 years ago by 24k
0
votes
0
replies
3.0k
views
Comment: C: Exon-Start Same As Exon-End From Ucsc Knowngene
updated 5.2 years ago by 44k • written 13.5 years ago by 24k
0
votes
0
replies
10k
views
Comment: C: Position Weight Matrix From Sequence Alignment
updated 5.2 years ago by 44k • written 13.6 years ago by 24k
916 results • Page 1 of 19
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