Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
1.9k
views
Comment: C: Error : run cnvkit from bam
6.2 years ago by Amitm ★ 2.3k
0
votes
1
reply
1.9k
views
Comment: C: Error : run cnvkit from bam
6.2 years ago by Amitm ★ 2.3k
1
vote
1
reply
1.9k
views
Comment: C: Error : run cnvkit from bam
6.2 years ago by Amitm ★ 2.3k
3
votes
1
reply
2.1k
views
Answer: A: Different results for differentially expressed genes in RNA-seq analysis with cu
6.2 years ago by Amitm ★ 2.3k
0
votes
0
replies
1.1k
views
Answer: A: What is a good way to compare the WES and panel seq results from the same set of
6.2 years ago by Amitm ★ 2.3k
0
votes
0
replies
1.2k
views
Comment: C: Installation error pindel
6.2 years ago by Amitm ★ 2.3k
0
votes
1
reply
4.0k
views
Comment: C: FPKM matrix after stringtie using ballgown
6.2 years ago by Amitm ★ 2.3k
0
votes
1
reply
4.0k
views
Comment: C: FPKM matrix after stringtie using ballgown
6.2 years ago by Amitm ★ 2.3k
0
votes
1
reply
4.0k
views
Comment: C: FPKM matrix after stringtie using ballgown
6.2 years ago by Amitm ★ 2.3k
0
votes
0
replies
2.0k
views
Comment: C: I want to ask a question From COSMIC database
6.3 years ago by Amitm ★ 2.3k
1
vote
0
replies
1.5k
views
Comment: C: How to obtain alignment figure?
6.3 years ago by Amitm ★ 2.3k
0
votes
0
replies
4.0k
views
Comment: C: TLEN sam format
6.3 years ago by Amitm ★ 2.3k
0
votes
0
replies
4.0k
views
Comment: C: TLEN sam format
6.3 years ago by Amitm ★ 2.3k
6
votes
1
reply
4.0k
views
Answer: A: TLEN sam format
6.3 years ago by Amitm ★ 2.3k
0
votes
1
reply
2.6k
views
Comment: C: Tool to process VCF file
6.3 years ago by Amitm ★ 2.3k
1
vote
1
reply
2.6k
views
Comment: C: Tool to process VCF file
6.3 years ago by Amitm ★ 2.3k
0
votes
1
reply
1.8k
views
Comment: C: How to find Novel transcripts
6.7 years ago by Amitm ★ 2.3k
1
vote
1
reply
1.8k
views
Comment: C: StringTie inconsistent expression value
6.7 years ago by Amitm ★ 2.3k
0
votes
0
replies
11k
views
Comment: C: STAR do i need --twopassMode ?
6.7 years ago by Amitm ★ 2.3k
0
votes
1
reply
11k
views
Comment: C: STAR do i need --twopassMode ?
6.7 years ago by Amitm ★ 2.3k
4
votes
2
replies
11k
views
Answer: C: STAR do i need --twopassMode ?
6.7 years ago by Amitm ★ 2.3k
2
votes
0
replies
1.7k
views
Comment: C: Help exploring unknown region
6.7 years ago by Amitm ★ 2.3k
0
votes
1
reply
1.7k
views
Comment: C: Help exploring unknown region
6.7 years ago by Amitm ★ 2.3k
0
votes
0
replies
1.7k
views
Comment: C: gene expression database for quary a gene
6.8 years ago by Amitm ★ 2.3k
0
votes
0
replies
1.3k
views
Comment: C: How do I normalize this data for plotting?
6.8 years ago by Amitm ★ 2.3k
0
votes
1
reply
1.9k
views
Comment: C: VCF format tool question
6.8 years ago by Amitm ★ 2.3k
1
vote
1
reply
1.9k
views
Comment: C: VCF format tool question
6.8 years ago by Amitm ★ 2.3k
1
vote
1
reply
7.6k
views
Comment: C: HTSEq-Count returns 0 counts for all genes in the counts file!
6.8 years ago by Amitm ★ 2.3k
1
vote
0
replies
2.0k
views
Comment: C: ExAC includes WES of phenotyped population
6.9 years ago by Amitm ★ 2.3k
2
votes
0
replies
1.4k
views
Answer: A: Mutations and copy number variations from DNA-Seq
6.9 years ago by Amitm ★ 2.3k
2
votes
6
replies
3.7k
views
Removing PCR primers in targeted sequencing with nested amplicons
fastq MiSeq sequencing alignment ampicon-seq
updated 2.3 years ago by 44k • written 8.9 years ago by ★ 2.3k
0
votes
0
replies
9.0k
views
Comment: C: From TCGA to GDC (Genomic data commons)
7.8 years ago by Amitm ★ 2.3k
0
votes
1
reply
3.7k
views
Comment: C: RepeatMasker: createLib() Error
8.0 years ago by Amitm ★ 2.3k
1
vote
0
replies
2.2k
views
Comment: C: For RNA seq data analysis
8.0 years ago by Amitm ★ 2.3k
0
votes
0
replies
9.1k
views
Comment: C: STAR - genome indexes generation, genome file not created
8.0 years ago by Amitm ★ 2.3k
0
votes
1
reply
9.1k
views
Comment: C: STAR - genome indexes generation, genome file not created
8.0 years ago by Amitm ★ 2.3k
3
votes
2
replies
5.5k
views
Answer: A: How to annotate CNV events with gene information?
8.0 years ago by Amitm ★ 2.3k
2
votes
2
replies
2.2k
views
Comment: C: For RNA seq data analysis
8.0 years ago by Amitm ★ 2.3k
0
votes
0
replies
5.3k
views
Comment: C: Somatic mutations from RNA-Seq data of tumor vs. normal
8.0 years ago by Amitm ★ 2.3k
0
votes
1
reply
2.4k
views
Comment: C: viewing microRNA in IGV
8.1 years ago by Amitm ★ 2.3k
1
vote
1
reply
5.0k
views
Comment: C: Clarification of good pipeline for transcriptome assembly of RNA-seq data
8.1 years ago by Amitm ★ 2.3k
0
votes
2
replies
5.0k
views
Comment: C: Clarification of good pipeline for transcriptome assembly of RNA-seq data
8.1 years ago by Amitm ★ 2.3k
0
votes
0
replies
2.0k
views
Comment: C: Will you critique/rate my mRNA seq alignment analysis?
8.2 years ago by Amitm ★ 2.3k
0
votes
0
replies
2.2k
views
Answer: A: TCGA melanoma brain metastasis
8.2 years ago by Amitm ★ 2.3k
1
vote
0
replies
2.7k
views
Comment: C: Annotate VCF with RepeatMasker
8.2 years ago by Amitm ★ 2.3k
2
votes
0
replies
2.4k
views
Answer: A: InterPro Scan error with nucleotide sequences
8.2 years ago by Amitm ★ 2.3k
2
votes
0
replies
2.4k
views
Answer: A: Looking for a cancer dataset for RNA-Seq workshop
8.2 years ago by Amitm ★ 2.3k
2
votes
1
reply
2.7k
views
Answer: A: Annotate VCF with RepeatMasker
8.2 years ago by Amitm ★ 2.3k
1
vote
0
replies
2.0k
views
Answer: A: RPKMs On Transcript Level
8.2 years ago by Amitm ★ 2.3k
2
votes
0
replies
4.1k
views
Comment: C: I am trying to load a BAM file (Whole Genome) to IGV but I can't see anything
8.2 years ago by Amitm ★ 2.3k
280 results • Page 3 of 6
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6