Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
2.7k
views
Comment: C: Clipping primer after alignment
5.7 years ago by finswimmer 16k
0
votes
6
replies
2.7k
views
Clipping primer after alignment
bam clipping
updated 4.0 years ago by ▴ 30 • written 5.7 years ago by 16k
0
votes
0
replies
1.2k
views
Comment: C: How to generate consensus fasta uninterleaved from bam?
5.7 years ago by finswimmer 16k
0
votes
0
replies
1.5k
views
Comment: C: Generation of incorrect heterozygous calls after left normalization using bcftoo
5.8 years ago by finswimmer 16k
0
votes
1
reply
1.5k
views
Comment: C: Generation of incorrect heterozygous calls after left normalization using bcftoo
5.8 years ago by finswimmer 16k
0
votes
0
replies
1.4k
views
Comment: C: bcftools merge creates high missingness rate
5.8 years ago by finswimmer 16k
0
votes
0
replies
980
views
Comment: C: multi sample vcf to data matrix
5.8 years ago by finswimmer 16k
1
vote
0
replies
1.3k
views
Comment: C: Consensus sequence from multiple BAM files on a single position
5.8 years ago by finswimmer 16k
0
votes
0
replies
1.6k
views
Comment: C: bedtool getfasta only reads the first line of my bedfile
5.8 years ago by finswimmer 16k
2
votes
0
replies
1.3k
views
Answer: A: 1000 Human Genomes Project Population Alignment Data
5.8 years ago by finswimmer 16k
0
votes
1
reply
1.6k
views
Comment: C: bedtool getfasta only reads the first line of my bedfile
5.8 years ago by finswimmer 16k
0
votes
0
replies
1.6k
views
Comment: C: Bam QC, GC content
5.8 years ago by finswimmer 16k
0
votes
1
reply
1.3k
views
Comment: C: .bam mpileup mapping quality
5.8 years ago by finswimmer 16k
0
votes
0
replies
1.2k
views
Comment: C: Filtering for homozygous reference alleles
5.8 years ago by finswimmer 16k
0
votes
0
replies
1.1k
views
Comment: C: how to extract just one fast sequence from a multiple sequence vcf?
5.8 years ago by finswimmer 16k
1
vote
1
reply
4.6k
views
Comment: C: Error: malformed header while uploading .vcf.gz files to Michigan imputation ser
5.8 years ago by finswimmer 16k
0
votes
0
replies
3.4k
views
Comment: C: Filtering GFF3 file
5.8 years ago by finswimmer 16k
1
vote
1
reply
1.2k
views
Answer: C: bcftools merge heterozygous calls
5.8 years ago by finswimmer 16k
1
vote
1
reply
9.5k
views
Comment: C: Snakemake input and wildcards
5.8 years ago by finswimmer 16k
0
votes
0
replies
3.4k
views
Comment: C: Filtering GFF3 file
5.8 years ago by finswimmer 16k
0
votes
1
reply
3.4k
views
Comment: C: Filtering GFF3 file
5.8 years ago by finswimmer 16k
1
vote
0
replies
1.3k
views
Answer: A: Manifest and off target
5.8 years ago by finswimmer 16k
0
votes
0
replies
990
views
Comment: C: bcftools merge heterozygous calls
5.8 years ago by finswimmer 16k
3
votes
1
reply
1.5k
views
Comment: C: Running blast command line inside python script
5.8 years ago by finswimmer 16k
0
votes
0
replies
2.3k
views
Comment: C: Add tag to FORMAT tab of vcf
5.8 years ago by finswimmer 16k
0
votes
0
replies
1.9k
views
Comment: C: Pysam--how to check for empty results in fetch(region) of bam file
5.8 years ago by finswimmer 16k
0
votes
0
replies
1.1k
views
Comment: C: Merging SNV and DIV vcfs of the same Individual
5.8 years ago by finswimmer 16k
0
votes
0
replies
5.8k
views
Comment: C: bcftools merge duplicate names
5.8 years ago by finswimmer 16k
1
vote
1
reply
5.8k
views
Comment: C: bcftools merge duplicate names
5.8 years ago by finswimmer 16k
4
votes
1
reply
5.0k
views
Answer: A: Consensus reads from UMIs
5.8 years ago by finswimmer 16k
0
votes
0
replies
3.1k
views
Comment: C: Fasta extraction from bed file
5.8 years ago by finswimmer 16k
0
votes
0
replies
5.0k
views
Comment: C: bcftools and VCFTools consensus functionality both not working unless there are
5.8 years ago by finswimmer 16k
1
vote
0
replies
1.5k
views
Answer: A: How to remove all characters after a specific pattern?
5.8 years ago by finswimmer 16k
1
vote
1
reply
4.7k
views
Comment: C: Remove line with awk in vcf.gz
5.8 years ago by finswimmer 16k
3
votes
1
reply
4.7k
views
Answer: A: Remove line with awk in vcf.gz
5.8 years ago by finswimmer 16k
0
votes
0
replies
2.0k
views
Comment: C: Complementary strand in cluster generation
5.8 years ago by finswimmer 16k
0
votes
0
replies
35k
views
Comment: C: bcftools-merge for vcf files
5.8 years ago by finswimmer 16k
1
vote
1
reply
2.1k
views
Answer: A: skipping column names using awk
5.8 years ago by finswimmer 16k
0
votes
1
reply
2.0k
views
Comment: C: SAM file generation problem
5.9 years ago by finswimmer 16k
4
votes
1
reply
30k
views
Answer: A: Creating workflows with snakemake and conda
5.9 years ago by finswimmer 16k
0
votes
0
replies
1.7k
views
Comment: C: BCF missing sample names
5.9 years ago by finswimmer 16k
1
vote
1
reply
35k
views
Comment: C: bcftools-merge for vcf files
5.9 years ago by finswimmer 16k
0
votes
0
replies
1.2k
views
Answer: A: Compare results of test pipelines with the ones from GIAB
5.9 years ago by finswimmer 16k
0
votes
1
reply
2.9k
views
Comment: C: Is it possible to output uncompressed FastQ files with bcl2fastq2 ?
5.9 years ago by finswimmer 16k
3
votes
1
reply
35k
views
Answer: A: bcftools-merge for vcf files
5.9 years ago by finswimmer 16k
0
votes
1
reply
1.7k
views
Comment: C: BCF missing sample names
5.9 years ago by finswimmer 16k
2
votes
1
reply
2.7k
views
Comment: C: Command line explain
5.9 years ago by finswimmer 16k
0
votes
1
reply
2.7k
views
Answer: A: Amount of variants increased after bedtools subtract
5.9 years ago by finswimmer 16k
0
votes
0
replies
1.2k
views
Comment: C: SNPEff missing annotations from VCF?
5.9 years ago by finswimmer 16k
4
votes
0
replies
16k
views
Answer: C: Error : Could not build fai index
5.9 years ago by finswimmer 16k
1,610 results • Page 3 of 33
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6