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Comment: C: Extract Base Based On Position From Bam File
updated 4.3 years ago by 44k • written 12.3 years ago by ▴ 890
2
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4
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27k
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Comment: A: Extract Base Based On Position From Bam File
updated 4.3 years ago by 44k • written 12.3 years ago by ▴ 890
1
vote
1
reply
94k
views
Answer: A: Extract Sub-Set Of Regions From Vcf File
updated 4.9 years ago by 44k • written 12.5 years ago by ▴ 890
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0
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6.6k
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Comment: Comment: Why Gatk Realignertargetcreator Outputs An Empty .Intervals???
updated 2.7 years ago by 44k • written 12.6 years ago by ▴ 890
10
votes
8
replies
13k
views
9 follow
Ribosomal Intervals For Collectrnaseqmetrics
rna-seq qc picard
updated 15 months ago by 44k • written 11.7 years ago by ▴ 890
9
votes
4
replies
7.4k
views
Tophat - Expectancy Of Properly Paired Reads?
tophat rna-seq
updated 5.4 years ago by 20 • written 12.2 years ago by ▴ 890
4
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0
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21k
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Answer: A: Installing Vcftools
updated 5.4 years ago by 44k • written 12.3 years ago by ▴ 890
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0
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2.1k
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Job: System developer at the Swedish National Genomics Infrastructure, SciLifeLab
software-development genomics sequencing
updated 18 months ago by 44k • written 6.8 years ago by ▴ 890
7
votes
2
replies
10k
views
Difference Between Picards Mergebamalignment And Mergesamfiles
picard
updated 7.6 years ago by ★ 2.1k • written 11.9 years ago by ▴ 890
1
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0
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3.0k
views
Job: Two system developers at the SNP&SEQ technology platform, Uppsala University, Sweden
system-developer
updated 20 months ago by 44k • written 10.0 years ago by ▴ 890
1
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1
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2.0k
views
Job: Two bioinformaticians at the SNP&SEQ technology platform, Uppsala University, Sweden
bioinformatician
updated 23 months ago by 44k • written 10.0 years ago by ▴ 890
9
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12
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3.9k
views
Samlocusiterator Skips Every Second Locus
picard java
updated 2.9 years ago by 44k • written 11.8 years ago by ▴ 890
3
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2
replies
5.1k
views
Missing Allele Balance Tag In Vcf File
gatk allele
updated 2.7 years ago by ▴ 120 • written 12.6 years ago by ▴ 890
1
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0
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3.6k
views
Answer: A: Cummerbund Help
10.8 years ago by Johan ▴ 890
5
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1
reply
33k
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Answer: A: Which Bioinformatic Friendly Pipeline Building Framework?
10.8 years ago by Johan ▴ 890
1
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1
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2.7k
views
Answer: A: Large Data Set Analysis With Cuffdiff
10.9 years ago by Johan ▴ 890
1
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0
replies
4.3k
views
Answer: A: Qscript Example For Pipelining Gatk With Queue
11.2 years ago by Johan ▴ 890
0
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0
replies
12k
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Comment: C: Cuffdiff Command Line For Labels And Replicates
11.4 years ago by Johan ▴ 890
6
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6
replies
12k
views
Cuffdiff Command Line For Labels And Replicates
cuffdiff
11.4 years ago by Johan ▴ 890
2
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2
replies
12k
views
Answer: A: Cuffdiff Command Line For Labels And Replicates
11.4 years ago by Johan ▴ 890
0
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0
replies
27k
views
Comment: C: Extract Base Based On Position From Bam File
11.5 years ago by Johan ▴ 890
0
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0
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3.9k
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Comment: C: Linear Regression Of Interacting Genotypes In Java
11.7 years ago by Johan ▴ 890
1
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1
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3.9k
views
Comment: C: Samlocusiterator Skips Every Second Locus
11.8 years ago by Johan ▴ 890
0
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0
replies
3.9k
views
Comment: C: Samlocusiterator Skips Every Second Locus
11.8 years ago by Johan ▴ 890
0
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2
replies
3.9k
views
Comment: C: Samlocusiterator Skips Every Second Locus
11.8 years ago by Johan ▴ 890
3
votes
1
reply
2.2k
views
Java Fasta Reference Iterator
java fasta
updated 11.8 years ago by 164k • written 11.8 years ago by ▴ 890
5
votes
1
reply
6.5k
views
What Are The (Non-Standard) Bd And Bi Tags In Samformat?
sam
updated 11.8 years ago by 164k • written 11.8 years ago by ▴ 890
0
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0
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8.7k
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Comment: C: How To Calculate The Coverage Of A Specific Interval Based On Data From A Bam Fi
11.8 years ago by Johan ▴ 890
2
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0
replies
43k
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Answer: A: Comparing 2 Large Lists (Millions Of Rows) To Identify Shared And Exclusive Elem
11.8 years ago by Johan ▴ 890
6
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0
replies
12k
views
Answer: A: Is Star Managing Strand-Specific Data ?
11.8 years ago by Johan ▴ 890
3
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2
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3.9k
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Answer: A: Linear Regression Of Interacting Genotypes In Java
11.8 years ago by Johan ▴ 890
0
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1
reply
8.8k
views
Comment: C: Contig Incompatibility For Depth Of Coverage Calculations Using Gatk
11.8 years ago by Johan ▴ 890
0
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1
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8.8k
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Comment: C: Contig Incompatibility For Depth Of Coverage Calculations Using Gatk
11.8 years ago by Johan ▴ 890
0
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2
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8.8k
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Answer: A: Contig Incompatibility For Depth Of Coverage Calculations Using Gatk
11.8 years ago by Johan ▴ 890
5
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0
replies
6.9k
views
Answer: A: Visualizing The Outputs Of Gatk/Depthofcoverage
11.9 years ago by Johan ▴ 890
0
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0
replies
5.2k
views
Comment: C: Transcript Assembly In Dense Genome Using Cufflinks
12.1 years ago by Johan ▴ 890
5
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4
replies
5.2k
views
Transcript Assembly In Dense Genome Using Cufflinks
cufflinks rna-seq
updated 12.1 years ago by ▴ 30 • written 12.1 years ago by ▴ 890
0
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0
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3.7k
views
Answer: A: Does Markduplicates Work If Mate Pair Information Is Not 'Fixed'?
12.2 years ago by Johan ▴ 890
1
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1
reply
9.0k
views
Answer: A: Vcftools, Command Not Found !
12.2 years ago by Johan ▴ 890
2
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1
reply
8.7k
views
Answer: A: How To Calculate The Coverage Of A Specific Interval Based On Data From A Bam Fi
12.2 years ago by Johan ▴ 890
3
votes
0
replies
5.0k
views
Answer: A: Vcf File With Variants And Genotypes For A "Single Individual"
12.3 years ago by Johan ▴ 890
0
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0
replies
27k
views
Comment: C: Extract Base Based On Position From Bam File
12.3 years ago by Johan ▴ 890
0
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1
reply
27k
views
Comment: C: Extract Base Based On Position From Bam File
12.3 years ago by Johan ▴ 890
0
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0
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3.0k
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Comment: C: Use Of Dinup
12.3 years ago by Johan ▴ 890
1
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1
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3.0k
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Comment: C: Use Of Dinup
12.3 years ago by Johan ▴ 890
0
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1
reply
3.0k
views
Comment: C: Use Of Dinup
12.3 years ago by Johan ▴ 890
4
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0
replies
3.4k
views
Answer: A: Microarray Class Prediction - For Continuous Data?
12.3 years ago by Johan ▴ 890
0
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0
replies
4.0k
views
Comment: C: Questions On Specifying And Merging Scatter/Gather In Gatk Parallelism
12.3 years ago by Johan ▴ 890
4
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1
reply
4.0k
views
Answer: A: Machine Learning To Find The More Informative Features To Predict And Outcome
12.3 years ago by Johan ▴ 890
5
votes
0
replies
5.8k
views
Answer: A: Platform Unit For Sam Read Group
12.3 years ago by Johan ▴ 890
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