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Comment: Comment: Calculating percentage of cells proliferating in single cell rna seq data
4 weeks ago by Haci ▴ 680
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0
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256
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Comment: Comment: merging Seurat objects after SCT
4 weeks ago by Haci ▴ 680
1
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1
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642
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Comment: Comment: DESeq2 Multifactor Design
5 weeks ago by Haci ▴ 680
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0
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642
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Comment: Comment: DESeq2 Multifactor Design
5 weeks ago by Haci ▴ 680
2
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1
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642
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Comment: Comment: DESeq2 Multifactor Design
5 weeks ago by Haci ▴ 680
1
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0
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271
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Comment: Comment: RNA seq normalization and gene gene correlation
5 weeks ago by Haci ▴ 680
2
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1
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323
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Comment: Comment: How to row normalize a matrixplot?
5 weeks ago by Haci ▴ 680
1
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1
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315
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Answer: Answer: ComplexHeatmap with specific rownames
updated 5 weeks ago by 43k • written 6 weeks ago by ▴ 680
2
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0
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473
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Answer: Answer: Can anyone give me the code for in-silico digestion of whole genome with two res
6 weeks ago by Haci ▴ 680
3
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1
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389
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Answer: Answer: kraken2 vs krakenuniq
updated 6 weeks ago by 43k • written 6 weeks ago by ▴ 680
1
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0
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297
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Comment: Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
6 weeks ago by Haci ▴ 680
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0
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331
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Comment: Comment: How to compare bulk RNA seq data demultiplexed in different ways?
6 weeks ago by Haci ▴ 680
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0
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595
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Comment: Comment: Installing Cell Ranger
6 weeks ago by Haci ▴ 680
0
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0
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232
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Comment: Comment: Finding chimeric reads for CRISPR edited mouse cells from RNA-Seq data
6 weeks ago by Haci ▴ 680
3
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0
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370
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Answer: Answer: FDR and Bonferroni
7 weeks ago by Haci ▴ 680
1
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0
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356
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Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
9 weeks ago by Haci ▴ 680
0
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1
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356
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Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
9 weeks ago by Haci ▴ 680
0
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1
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356
views
Comment: Comment: how to convert SummarizedExperiment files to DESeqDataSet??
9 weeks ago by Haci ▴ 680
0
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1
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369
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Comment: Comment: transcriptomic data for molecular subtyping
12 weeks ago by Haci ▴ 680
0
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0
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640
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Comment: Comment: RNAseq analysis: how to add new gene into an existing worm based reference
3 months ago by Haci ▴ 680
1
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1
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618
views
Comment: Comment: plotCounts() error in R: indexing outside of limit
4 months ago by Haci ▴ 680
1
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2
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618
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Comment: Comment: plotCounts() error in R: indexing outside of limit
4 months ago by Haci ▴ 680
0
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0
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496
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Comment: Comment: Edit fasta header for TSA submission
7 months ago by Haci ▴ 680
3
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1
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751
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Answer: Answer: Generate a fraction of immune cell between two condition from single cell RNAseq
8 months ago by Haci ▴ 680
0
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1
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582
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Comment: Comment: What to do after importing quantification with tximport
8 months ago by Haci ▴ 680
0
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0
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2.3k
views
Comment: Comment: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
11 months ago by Haci ▴ 680
0
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1
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2.3k
views
Answer: Answer: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
11 months ago by Haci ▴ 680
0
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1
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11k
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Comment: C: cellranger count help
3.9 years ago by Haci ▴ 680
1
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1
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2.9k
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Comment: C: What are good packages to find Differentially Expressed Genes from RNASeq RSEM a
4.0 years ago by Haci ▴ 680
2
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2
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1.0k
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Answer: C: Subsetting Genes from Clusters
4.1 years ago by Haci ▴ 680
0
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0
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840
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Answer: A: Differential gene expression
4.1 years ago by Haci ▴ 680
0
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0
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1.9k
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Comment: C: Seurat integrated analysis - methods for cell-type specific responses
4.1 years ago by Haci ▴ 680
0
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0
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3.7k
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Comment: C: Legends in FeaturePlot of Seurat Package
4.1 years ago by Haci ▴ 680
0
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1
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1.3k
views
Comment: C: MUC5AC is not present in deseq2 results
4.1 years ago by Haci ▴ 680
2
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1
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1.3k
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Answer: C: MUC5AC is not present in deseq2 results
4.1 years ago by Haci ▴ 680
0
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1
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1.3k
views
Comment: C: MUC5AC is not present in deseq2 results
4.1 years ago by Haci ▴ 680
0
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0
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11k
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Comment: C: cellranger count help
4.2 years ago by Haci ▴ 680
0
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2
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11k
views
Comment: C: cellranger count help
4.2 years ago by Haci ▴ 680
3
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1
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11k
views
Answer: A: cellranger count help
4.2 years ago by Haci ▴ 680
0
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0
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1.5k
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Comment: C: SCRNAseq vs qRT PCR
4.2 years ago by Haci ▴ 680
4
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1
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8.6k
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Comment: C: removing overrepresented sequences from rna-seq
4.2 years ago by Haci ▴ 680
0
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0
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1.2k
views
Comment: C: sample-specific filtering of counts matrix
4.2 years ago by Haci ▴ 680
1
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1
reply
4.8k
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Comment: C: how to unpack sra file?
4.2 years ago by Haci ▴ 680
1
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0
replies
1.4k
views
Comment: C: Bac-end mapping to a genome
4.2 years ago by Haci ▴ 680
1
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1
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1.4k
views
Comment: C: Bac-end mapping to a genome
4.2 years ago by Haci ▴ 680
0
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1
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1.0k
views
Comment: C: what can i do with R2 reads
4.2 years ago by Haci ▴ 680
2
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1
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1.4k
views
Answer: A: Bac-end mapping to a genome
4.2 years ago by Haci ▴ 680
1
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0
replies
9.4k
views
Comment: C: Seurat integration of two datasets - GSE126783
4.3 years ago by Haci ▴ 680
3
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1
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9.4k
views
Answer: C: Seurat integration of two datasets - GSE126783
4.3 years ago by Haci ▴ 680
0
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0
replies
3.1k
views
Comment: C: best way to combine RNAseq data from different sequencing batches
4.3 years ago by Haci ▴ 680
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