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Comment: Calculating percentage of cells proliferating in single cell rna seq data
4 weeks ago by
Haci
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256
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Comment:
Comment: merging Seurat objects after SCT
4 weeks ago by
Haci
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641
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Comment: DESeq2 Multifactor Design
5 weeks ago by
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641
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Comment: DESeq2 Multifactor Design
5 weeks ago by
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▴ 680
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641
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Comment:
Comment: DESeq2 Multifactor Design
5 weeks ago by
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▴ 680
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271
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Comment: RNA seq normalization and gene gene correlation
5 weeks ago by
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▴ 680
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323
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Comment: How to row normalize a matrixplot?
5 weeks ago by
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Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
6 weeks ago by
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330
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Comment: How to compare bulk RNA seq data demultiplexed in different ways?
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595
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Comment: Installing Cell Ranger
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231
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Comment: Finding chimeric reads for CRISPR edited mouse cells from RNA-Seq data
6 weeks ago by
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356
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Comment:
Comment: how to convert SummarizedExperiment files to DESeqDataSet??
9 weeks ago by
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356
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Comment:
Comment: how to convert SummarizedExperiment files to DESeqDataSet??
9 weeks ago by
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356
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Comment:
Comment: how to convert SummarizedExperiment files to DESeqDataSet??
9 weeks ago by
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368
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Comment: transcriptomic data for molecular subtyping
12 weeks ago by
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640
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Comment: RNAseq analysis: how to add new gene into an existing worm based reference
3 months ago by
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617
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Comment: plotCounts() error in R: indexing outside of limit
4 months ago by
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617
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Comment: plotCounts() error in R: indexing outside of limit
4 months ago by
Haci
▴ 680
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496
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Comment:
Comment: Edit fasta header for TSA submission
7 months ago by
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582
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Comment: What to do after importing quantification with tximport
8 months ago by
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2.3k
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Comment:
Comment: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
11 months ago by
Haci
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11k
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Comment:
C: cellranger count help
3.9 years ago by
Haci
▴ 680
1
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1
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2.9k
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Comment:
C: What are good packages to find Differentially Expressed Genes from RNASeq RSEM a
4.0 years ago by
Haci
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1.9k
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C: Seurat integrated analysis - methods for cell-type specific responses
4.1 years ago by
Haci
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3.7k
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Comment:
C: Legends in FeaturePlot of Seurat Package
4.1 years ago by
Haci
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1.3k
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Comment:
C: MUC5AC is not present in deseq2 results
4.1 years ago by
Haci
▴ 680
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1.3k
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Comment:
C: MUC5AC is not present in deseq2 results
4.1 years ago by
Haci
▴ 680
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11k
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Comment:
C: cellranger count help
4.2 years ago by
Haci
▴ 680
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2
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11k
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Comment:
C: cellranger count help
4.2 years ago by
Haci
▴ 680
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1.5k
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Comment:
C: SCRNAseq vs qRT PCR
4.2 years ago by
Haci
▴ 680
4
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8.6k
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Comment:
C: removing overrepresented sequences from rna-seq
4.2 years ago by
Haci
▴ 680
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1.2k
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Comment:
C: sample-specific filtering of counts matrix
4.2 years ago by
Haci
▴ 680
1
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1
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4.8k
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Comment:
C: how to unpack sra file?
4.2 years ago by
Haci
▴ 680
1
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1.4k
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Comment:
C: Bac-end mapping to a genome
4.2 years ago by
Haci
▴ 680
1
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1
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1.4k
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Comment:
C: Bac-end mapping to a genome
4.2 years ago by
Haci
▴ 680
0
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1
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1.0k
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Comment:
C: what can i do with R2 reads
4.2 years ago by
Haci
▴ 680
1
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0
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9.4k
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Comment:
C: Seurat integration of two datasets - GSE126783
4.3 years ago by
Haci
▴ 680
0
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0
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3.1k
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Comment:
C: best way to combine RNAseq data from different sequencing batches
4.3 years ago by
Haci
▴ 680
0
votes
1
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1.2k
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Comment:
A: featurecounts output changes the underscores in the sample name into dots
4.3 years ago by
Haci
▴ 680
1
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0
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3.1k
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Comment:
C: Cox proportional hazards regression use log2 fpkm
4.5 years ago by
Haci
▴ 680
0
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1
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2.5k
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Comment:
C: Mapping Entrez gene ids to Ensembl ids
4.7 years ago by
Haci
▴ 680
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1
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1.8k
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Comment:
C: how to set Deseq factor
4.7 years ago by
Haci
▴ 680
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1.8k
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Comment:
C: how to set Deseq factor
4.7 years ago by
Haci
▴ 680
0
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0
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2.4k
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Comment:
C: count matrices for genes and transcripts for all samples
4.7 years ago by
Haci
▴ 680
0
votes
0
replies
1.9k
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Comment:
C: scRNAseq: How to select your reference dataset for cell type identification
4.8 years ago by
Haci
▴ 680
0
votes
0
replies
3.1k
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Comment:
C: How to use WhichCells Function to label clusters
4.8 years ago by
Haci
▴ 680
2
votes
2
replies
9.9k
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Comment:
C: scRNA-seq, SEURAT, NormalizeData, ScaleData, PCA, CCA ...
5.5 years ago by
Haci
▴ 680
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