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464
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Comment: Comment: DESeq2: error in checkFullRank(modelMatrix)
5 weeks ago by cfos4698 ★ 1.1k
2
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0
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475
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Answer: Answer: samtools command not found in bash script
3 months ago by cfos4698 ★ 1.1k
1
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1
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808
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Answer: Answer: Problem with Newick format - ggtree in R
10 months ago by cfos4698 ★ 1.1k
2
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0
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987
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Answer: Answer: snippy error
10 months ago by cfos4698 ★ 1.1k
0
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0
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947
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Comment: Comment: RNA seq for non-model species
11 months ago by cfos4698 ★ 1.1k
2
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0
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1.8k
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Comment: Comment: Why is local BLAST so slow? (yet another one of these questions)
11 months ago by cfos4698 ★ 1.1k
0
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1
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947
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Comment: Comment: RNA seq for non-model species
11 months ago by cfos4698 ★ 1.1k
2
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2
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947
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Answer: Answer: RNA seq for non-model species
11 months ago by cfos4698 ★ 1.1k
1
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1
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1.6k
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Answer: Answer: Trimming nanopore reads
11 months ago by cfos4698 ★ 1.1k
0
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0
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5.9k
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Comment: Comment: Should I use the basecaller Dorado to analyze my Nanopore Data?
12 months ago by cfos4698 ★ 1.1k
2
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0
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1.0k
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Answer: Answer: Importing modules based on python in bash script wont work
12 months ago by cfos4698 ★ 1.1k
0
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0
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694
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Comment: Comment: Alternative to Gentrome?
12 months ago by cfos4698 ★ 1.1k
0
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1
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550
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Answer: Answer: What is the best way to identify which group of genes is more highly expressed?
13 months ago by cfos4698 ★ 1.1k
3
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1
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2.0k
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Comment: Comment: UMAP or TSNE for single cells?
13 months ago by cfos4698 ★ 1.1k
1
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0
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764
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Answer: Answer: Kaiju database download
13 months ago by cfos4698 ★ 1.1k
0
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0
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704
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Answer: Answer: Comparative transcriptomics between species
13 months ago by cfos4698 ★ 1.1k
2
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0
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9.3k
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Answer: Answer: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
15 months ago by cfos4698 ★ 1.1k
1
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1
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2.6k
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Comment: Comment: Automate the Splitting of a VCF File by Sample (bcftools)
15 months ago by cfos4698 ★ 1.1k
1
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0
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1.2k
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Answer: Answer: What is the fastest nucleotide sequence alignment search tool for 100mer queries
15 months ago by cfos4698 ★ 1.1k
0
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0
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729
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Answer: Answer: Can vg stats -a be used on a bam file?
16 months ago by cfos4698 ★ 1.1k
1
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1
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1.2k
views
Answer: Answer: Found some plasmids in my sequence. IS there any tool or process by which i can
16 months ago by cfos4698 ★ 1.1k
0
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1
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1.9k
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Comment: Comment: Converting string to numerical in bcftools
16 months ago by cfos4698 ★ 1.1k
0
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0
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2.5k
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Comment: Comment: WGCNA Analysis - blockwiseModules data processing
16 months ago by cfos4698 ★ 1.1k
0
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1
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3.3k
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Comment: Comment: Cannot process all the reads in a fast5 file?
16 months ago by cfos4698 ★ 1.1k
0
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1
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1.2k
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Answer: Answer: Align raw Nanopore reads (amplicon, long PCR)
16 months ago by cfos4698 ★ 1.1k
1
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0
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831
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Answer: Answer: Can you convert ASCII text to fastq?
16 months ago by cfos4698 ★ 1.1k
0
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0
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524
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Answer: Answer: Measuring Evolutionary Distance Between Species from Chronogram
17 months ago by cfos4698 ★ 1.1k
0
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1
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1.2k
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Answer: Answer: Extract Divergence Times and Corresponding Node Numbers from a Time Tree
17 months ago by cfos4698 ★ 1.1k
1
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1
reply
1.7k
views
Clarification for bcftools consensus
bcftools vcf
17 months ago by cfos4698 ★ 1.1k
1
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0
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1.7k
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Answer: Answer: Clarification for bcftools consensus
17 months ago by cfos4698 ★ 1.1k
2
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1
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787
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Answer: Answer: Phylogenetic tree visualization
17 months ago by cfos4698 ★ 1.1k
0
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1
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1.9k
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Comment: Comment: Converting string to numerical in bcftools
17 months ago by cfos4698 ★ 1.1k
0
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1
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1.9k
views
Answer: Answer: Converting string to numerical in bcftools
17 months ago by cfos4698 ★ 1.1k
0
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1
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40k
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Comment: Comment: Generating consensus sequence from bam file
18 months ago by cfos4698 ★ 1.1k
1
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1
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5.4k
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Answer: Answer: Best tool for trimming and filtering nanopore direct RNA sequencing.
19 months ago by cfos4698 ★ 1.1k
1
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1
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2.2k
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Comment: Comment: Help with error in snpEff command
20 months ago by cfos4698 ★ 1.1k
1
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1
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2.2k
views
Answer: Answer: Help with error in snpEff command
20 months ago by cfos4698 ★ 1.1k
0
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0
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3.2k
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Answer: Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
20 months ago by cfos4698 ★ 1.1k
0
votes
1
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1.2k
views
Answer: Answer: Help with my fasta filter python scrips
20 months ago by cfos4698 ★ 1.1k
1
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0
replies
3.7k
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Comment: Comment: bcftools isec output for multiple vcf files interpretations
20 months ago by cfos4698 ★ 1.1k
1
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1
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1.5k
views
Answer: Answer: How can I use bcftools mpileup or an alternative to find ALL variants without an
21 months ago by cfos4698 ★ 1.1k
2
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0
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3.8k
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Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
21 months ago by cfos4698 ★ 1.1k
1
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0
replies
3.0k
views
Comment: Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI
21 months ago by cfos4698 ★ 1.1k
1
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0
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1.3k
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Answer: Answer: Filtering VCF by specific tag in INFO field
21 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
views
Comment: Comment: Can not get bcftools norm to join biallelics into a multiallelic.
21 months ago by cfos4698 ★ 1.1k
3
votes
3
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1.1k
views
Filtering of tricky overlapping sites in VCF
vcf bcftools
22 months ago by cfos4698 ★ 1.1k
0
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0
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1.1k
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Answer: Answer: Filtering of tricky overlapping sites in VCF
22 months ago by cfos4698 ★ 1.1k
0
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0
replies
1.1k
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Comment: Comment: Filtering of tricky overlapping sites in VCF
22 months ago by cfos4698 ★ 1.1k
6
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0
replies
1.2k
views
Answer: Answer: How to extract FASTA headers in R
22 months ago by cfos4698 ★ 1.1k
2
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1
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5.3k
views
Comment: Comment: Conda is installing older version of Spades even though latest version is there
22 months ago by cfos4698 ★ 1.1k
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