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Answer: Answer: Convert Gene symbol to Ensembl ID
10 months ago by vinayjrao ▴ 260
0
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1
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1.5k
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Answer: Answer: Help with the new nomenclature of multi-nucleotide variants
10 months ago by vinayjrao ▴ 260
2
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1
reply
1.0k
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Answer: Answer: wANNOVAR memory error
10 months ago by vinayjrao ▴ 260
0
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0
replies
528
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Comment: Comment: Visualize and access gvcf/vcf files
10 months ago by vinayjrao ▴ 260
1
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0
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606
views
Answer: Answer: Filtering VCF files with bcftools
10 months ago by vinayjrao ▴ 260
0
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0
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498
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Comment: Comment: A question about using HISAT2 without biological replicates
10 months ago by vinayjrao ▴ 260
1
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2
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498
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A question about using HISAT2 without biological replicates
RNA-seq HISAT2
10 months ago by vinayjrao ▴ 260
0
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0
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1.3k
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Comment: Comment: How to decrypt EGA .crypt files?
16 months ago by vinayjrao ▴ 260
0
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0
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726
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Comment: Comment: Seeking assistance in scRNA Seq
2.2 years ago by vinayjrao ▴ 260
0
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2
replies
726
views
Seeking assistance in scRNA Seq
python scRNA-Seq R
2.2 years ago by vinayjrao ▴ 260
0
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2
replies
808
views
Merging bam files
bam merge rna-seq
updated 2.6 years ago by ★ 1.3k • written 2.6 years ago by ▴ 260
0
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0
replies
527
views
Variants in untargeted genes identified after targeted exome sequencing analysis
snp exome
3.2 years ago by vinayjrao ▴ 260
0
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0
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2.4k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
3.2 years ago by vinayjrao ▴ 260
0
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0
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2.4k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
3.2 years ago by vinayjrao ▴ 260
2
votes
10
replies
2.4k
views
Unable to overcome troubles in whole exome analysis
exome-seq markduplicates picard
updated 2.6 years ago by 44k • written 3.3 years ago by ▴ 260
1
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1
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2.4k
views
Answer: Answer: Unable to overcome troubles in whole exome analysis
3.3 years ago by vinayjrao ▴ 260
0
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0
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2.4k
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Comment: Comment: Unable to overcome troubles in whole exome analysis
3.3 years ago by vinayjrao ▴ 260
0
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1
reply
2.4k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
3.3 years ago by vinayjrao ▴ 260
0
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0
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2.4k
views
Comment: Comment: Unable to overcome troubles in whole exome analysis
3.3 years ago by vinayjrao ▴ 260
0
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0
replies
684
views
How to annotate variants against hs37d5?
SNP annotation
3.7 years ago by vinayjrao ▴ 260
7
votes
7
replies
24k
views
Calculating fpkm from raw counts
RNA-Seq R fpkm
updated 3.3 years ago by ▴ 10 • written 6.7 years ago by ▴ 260
0
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0
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966
views
Is it possible to call variants using cram files?
next-gen sequencing SNP
3.8 years ago by vinayjrao ▴ 260
0
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0
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1.1k
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Unable to convert from cram to bam
SNP software error sequencing next-gen
3.8 years ago by vinayjrao ▴ 260
0
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0
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6.8k
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Comment: C: Issue With CRAM -> BAM -> FASTQ Conversion
3.8 years ago by vinayjrao ▴ 260
0
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0
replies
2.3k
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Comment: C: Ignore replacing a comma within quotes
3.9 years ago by vinayjrao ▴ 260
0
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1
reply
2.3k
views
Comment: C: Ignore replacing a comma within quotes
3.9 years ago by vinayjrao ▴ 260
0
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0
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2.3k
views
Comment: C: Ignore replacing a comma within quotes
3.9 years ago by vinayjrao ▴ 260
0
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1
reply
2.3k
views
Comment: C: Ignore replacing a comma within quotes
3.9 years ago by vinayjrao ▴ 260
2
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8
replies
2.3k
views
Ignore replacing a comma within quotes
sed awk regex
3.9 years ago by vinayjrao ▴ 260
0
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0
replies
2.1k
views
Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
4.0 years ago by vinayjrao ▴ 260
0
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1
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2.1k
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Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
4.0 years ago by vinayjrao ▴ 260
10
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4
replies
2.1k
views
Recalibrating variants in GATK4.1 as compared to GATK3.7
SNP GATK
updated 4.0 years ago by ★ 4.3k • written 4.0 years ago by ▴ 260
0
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1
reply
876
views
Comment: C: Compare elements between rows and columns
4.0 years ago by vinayjrao ▴ 260
2
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3
replies
876
views
Compare elements between rows and columns
awk shell RNA-Seq
updated 2.6 years ago by 44k • written 4.0 years ago by ▴ 260
0
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1
reply
1.7k
views
Comment: C: Converting CRAM slices to get a CRAM file
4.1 years ago by vinayjrao ▴ 260
3
votes
4
replies
1.7k
views
Converting CRAM slices to get a CRAM file
samtools
updated 4.1 years ago by ★ 1.3k • written 4.1 years ago by ▴ 260
0
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0
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2.9k
views
Comment: C: Create files in multiple directories via for loop
4.1 years ago by vinayjrao ▴ 260
0
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1
reply
2.9k
views
Comment: C: Create files in multiple directories via for loop
4.1 years ago by vinayjrao ▴ 260
0
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1
reply
2.9k
views
Comment: C: Create files in multiple directories via for loop
4.1 years ago by vinayjrao ▴ 260
0
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1
reply
2.9k
views
Comment: C: Create files in multiple directories via for loop
4.1 years ago by vinayjrao ▴ 260
3
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9
replies
2.9k
views
Create files in multiple directories via for loop
shell linux
4.1 years ago by vinayjrao ▴ 260
0
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0
replies
2.3k
views
Comment: C: Converting tsv into bam file
4.1 years ago by vinayjrao ▴ 260
1
vote
3
replies
2.3k
views
Converting tsv into bam file
genome sequencing R linux
updated 4.1 years ago by 14k • written 4.1 years ago by ▴ 260
1
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1
reply
1.8k
views
Answer: C: How to login to dowload datasets from EGA - European Genome-phenome Archive?
4.1 years ago by vinayjrao ▴ 260
3
votes
3
replies
1.8k
views
How to login to dowload datasets from EGA - European Genome-phenome Archive?
java
4.1 years ago by vinayjrao ▴ 260
1
vote
1
reply
762
views
Appending output to a vector in R
R
updated 4.3 years ago by 3.2k • written 4.3 years ago by ▴ 260
0
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0
replies
2.3k
views
Comment: C: Annotating VCF files
4.3 years ago by vinayjrao ▴ 260
0
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3
replies
2.3k
views
Annotating VCF files
snp
4.3 years ago by vinayjrao ▴ 260
0
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1
reply
1.1k
views
Which of the output files of TrimGalore! must I align?
sequencing alignment SNP
4.4 years ago by vinayjrao ▴ 260
0
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0
replies
1.2k
views
Comment: C: How to annotate variants offline using ANNOVAR?
4.5 years ago by vinayjrao ▴ 260
184 results • Page 1 of 4
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