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396
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Answer: Answer: Error in conversion of ensembl to gene names
1 day ago by yura.grabovska ▴ 690
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347
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Comment: Comment: Seurat Mito Prefix Removed from Features
1 day ago by yura.grabovska ▴ 690
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347
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Answer: Answer: Seurat Mito Prefix Removed from Features
2 days ago by yura.grabovska ▴ 690
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196
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Answer: Answer: Is there a way to write a genbank file in R?
2 days ago by yura.grabovska ▴ 690
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196
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Answer: Answer: Help using enricher function from clusterProfiler
4 days ago by yura.grabovska ▴ 690
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286
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Comment: Comment: How to retain interactive plots from Glimma in R Markdown HTML Document
7 days ago by yura.grabovska ▴ 690
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286
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Comment: Comment: How to retain interactive plots from Glimma in R Markdown HTML Document
7 days ago by yura.grabovska ▴ 690
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306
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Comment: Comment: New scRNA-seq analysis software - Web-base - No coding needed
9 days ago by yura.grabovska ▴ 690
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134
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Seurat/Signac multiome analysis filtering on nCounts instead of nFeatures
10x Signac Seurat multiome
9 days ago by yura.grabovska ▴ 690
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1
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257
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Answer: Answer: What is the difference between the SCT data stored in data and scale.data in Seu
9 days ago by yura.grabovska ▴ 690
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728
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Comment: Comment: best practices for integrating
10 days ago by yura.grabovska ▴ 690
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368
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Comment: Comment: Could Anyone Help Me with Seurat code
16 days ago by yura.grabovska ▴ 690
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202
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Comment: Comment: Unable to link peaks to genes for multiomics data
16 days ago by yura.grabovska ▴ 690
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243
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Comment: Comment: Need help with fgsea
16 days ago by yura.grabovska ▴ 690
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2
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243
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Comment: Comment: Need help with fgsea
16 days ago by yura.grabovska ▴ 690
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368
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Comment: Comment: Could Anyone Help Me with Seurat code
16 days ago by yura.grabovska ▴ 690
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717
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
17 days ago by yura.grabovska ▴ 690
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717
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
21 days ago by yura.grabovska ▴ 690
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1
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717
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
21 days ago by yura.grabovska ▴ 690
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1
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322
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Comment: Comment: I encountered some problem while using bitr() for gene ID transversion.
24 days ago by yura.grabovska ▴ 690
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437
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Comment: Comment: Create Oncoprint with ggplot2
25 days ago by yura.grabovska ▴ 690
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500
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What's going on with Ensembl?
biomaRt ensembl
updated 29 days ago by ▴ 170 • written 6 weeks ago by ▴ 690
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418
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Comment: Comment: How to install deconstructSigs in R
29 days ago by yura.grabovska ▴ 690
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1
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501
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Comment: Comment: Changing label geom_text in ggplot
29 days ago by yura.grabovska ▴ 690
2
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1
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501
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Answer: Answer: Changing label geom_text in ggplot
29 days ago by yura.grabovska ▴ 690
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436
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Answer: Answer: TCGA Methylation Beta and Gene Expression Help
4 weeks ago by yura.grabovska ▴ 690
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322
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Comment: Comment: cellranger error - insufficient disc space allocated to cellranger
4 weeks ago by yura.grabovska ▴ 690
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1
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285
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Comment: Comment: Pigeon make-seurat produces empty output
4 weeks ago by yura.grabovska ▴ 690
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297
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Answer: Answer: fail to download data from seurat
5 weeks ago by yura.grabovska ▴ 690
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1
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248
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Comment: Comment: xCell output and immune cell ratio
6 weeks ago by yura.grabovska ▴ 690
1
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1
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388
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Answer: Answer: getMappedEntrezIDs from missmethyl package R
7 weeks ago by yura.grabovska ▴ 690
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1
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347
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Comment: Comment: Feature Selection for DNA methylation data
7 weeks ago by yura.grabovska ▴ 690
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566
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Comment: Comment: Differential expression analysis between groups with varying cell proportions
7 weeks ago by yura.grabovska ▴ 690
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1
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566
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Comment: Comment: Differential expression analysis between groups with varying cell proportions
7 weeks ago by yura.grabovska ▴ 690
1
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1
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574
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
7 weeks ago by yura.grabovska ▴ 690
1
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223
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Comment: Comment: Good Dotplots for homogenous data (Seurat)
7 weeks ago by yura.grabovska ▴ 690
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1
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574
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
7 weeks ago by yura.grabovska ▴ 690
1
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1
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297
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Comment: Comment: Cell cluster that mainly consists of doublet.
7 weeks ago by yura.grabovska ▴ 690
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245
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Comment: Comment: CCLE Cell lines annotations
8 weeks ago by yura.grabovska ▴ 690
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1
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437
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Comment: Comment: 0-based or 1-based file format using R pipeline?
8 weeks ago by yura.grabovska ▴ 690
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1
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437
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Comment: Comment: 0-based or 1-based file format using R pipeline?
8 weeks ago by yura.grabovska ▴ 690
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1
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299
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Answer: Answer: Appropriate minimum gene set size for gene set enrichment analysis
8 weeks ago by yura.grabovska ▴ 690
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275
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Seurat Xenium QC
R Xenium spatial Seurat
updated 8 weeks ago by 6.0k • written 8 weeks ago by ▴ 690
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364
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Comment: Comment: cnvpytor run problem
8 weeks ago by yura.grabovska ▴ 690
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1
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364
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Answer: Answer: cnvpytor run problem
8 weeks ago by yura.grabovska ▴ 690
1
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1
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558
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Answer: Answer: PCA for count data
8 weeks ago by yura.grabovska ▴ 690
1
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0
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396
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Comment: Comment: Removing features from RNA assay in seurat
9 weeks ago by yura.grabovska ▴ 690
1
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1
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396
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Comment: Comment: Removing features from RNA assay in seurat
9 weeks ago by yura.grabovska ▴ 690
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1.9k
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Comment: Comment: Center multiple pheatmap
9 weeks ago by yura.grabovska ▴ 690
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1
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1.9k
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Comment: Comment: Center multiple pheatmap
9 weeks ago by yura.grabovska ▴ 690
141 results • Page 1 of 3
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