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Comment: Comment: Controlling for mouse and human cell-cycle aspects of data simultaneously in Seu
2.9 years ago by jared.andrews07 ★ 18k
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2.6k
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Answer: Answer: List of cell cycle markers to use as reference in CellCycleScoring() in Seurat
3.0 years ago by jared.andrews07 ★ 18k
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2.6k
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Comment: Comment: DNA methylation preprocessing
3.0 years ago by jared.andrews07 ★ 18k
2
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2.4k
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Comment: Comment: How can NIH SRA data be more useful?
3.0 years ago by jared.andrews07 ★ 18k
3
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2.4k
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Comment: Comment: How can NIH SRA data be more useful?
3.0 years ago by jared.andrews07 ★ 18k
2
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2.1k
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Answer: Answer: scRNA-seq doublets with less features and UMIs than singlets? How?
3.0 years ago by jared.andrews07 ★ 18k
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1.3k
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Comment: Comment: Finding important genes in a big dataset (top 20-top30)
3.0 years ago by jared.andrews07 ★ 18k
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1.3k
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Comment: Comment: DESeq confusing results
3.0 years ago by jared.andrews07 ★ 18k
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2.1k
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Comment: Comment: Error in Enhanced Volcano : unused arguments
3.0 years ago by jared.andrews07 ★ 18k
1
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1
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2.0k
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Comment: Comment: tSNE and UMAP of scATAC-seq data looks like spaghetti
3.0 years ago by jared.andrews07 ★ 18k
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969
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Comment: Comment: Gene Expression Prediction from DNA sequences
3.0 years ago by jared.andrews07 ★ 18k
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969
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Answer: Answer: Gene Expression Prediction from DNA sequences
3.0 years ago by jared.andrews07 ★ 18k
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1
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2.1k
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Comment: Comment: Deseq2 dataframematrix error
3.0 years ago by jared.andrews07 ★ 18k
2
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1
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1.0k
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Answer: Answer: Question regarding Enhancers
3.0 years ago by jared.andrews07 ★ 18k
3
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1
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1.5k
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Comment: Comment: Differential expression analysis - issue with replicating results
3.0 years ago by jared.andrews07 ★ 18k
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1.2k
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Comment: Comment: Gene Ontology
3.1 years ago by jared.andrews07 ★ 18k
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1.3k
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Comment: Comment: How to know if certain gene is highly expressed compared to some common housekee
3.1 years ago by jared.andrews07 ★ 18k
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1.3k
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Answer: Answer: How to know if certain gene is highly expressed compared to some common housekee
3.1 years ago by jared.andrews07 ★ 18k
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0
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1.2k
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Comment: Comment: How to create shiny app for deseq2 object creation
3.1 years ago by jared.andrews07 ★ 18k
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1
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1.1k
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Comment: Comment: GO analyses background genes
3.1 years ago by jared.andrews07 ★ 18k
1
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860
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Answer: Answer: Tximport "sclaedTPMs" imports NumReads column from Salmon output
3.1 years ago by jared.andrews07 ★ 18k
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1
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1.1k
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Comment: Comment: GO analyses background genes
3.1 years ago by jared.andrews07 ★ 18k
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1
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5.9k
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Comment: Comment: Significance in gene ontology terms
3.1 years ago by jared.andrews07 ★ 18k
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1
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1.8k
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Comment: Comment: Would you please give me some advices about how to change header?
3.1 years ago by jared.andrews07 ★ 18k
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2
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1.8k
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Answer: Answer: Would you please give me some advices about how to change header?
3.1 years ago by jared.andrews07 ★ 18k
2
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0
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851
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Answer: Answer: Is a single dot on a UMAP or t-SNE for scRNA-seq - a single cell?
3.1 years ago by jared.andrews07 ★ 18k
1
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0
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3.3k
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Answer: Answer: Twice as many nFeature_RNA than nCount_RNA = more cell complexity? but how?
3.2 years ago by jared.andrews07 ★ 18k
0
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0
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64k
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Comment: Comment: In Seurat, How Do nCount_RNA Differ from nFeature_RNA?
3.2 years ago by jared.andrews07 ★ 18k
2
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0
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Answer: Answer: How to get FASTQ reads from the Short Read Archive (SRA)
3.2 years ago by jared.andrews07 ★ 18k
0
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1
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1.3k
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Comment: Comment: Error with indexing! STAR unable to access genome file SOS
3.2 years ago by jared.andrews07 ★ 18k
1
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2
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1.2k
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Answer: Answer: Basic help with RNA seq
3.2 years ago by jared.andrews07 ★ 18k
3
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0
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2.1k
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Answer: Answer: Bad Per sequence GC content
3.2 years ago by jared.andrews07 ★ 18k
3
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0
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1.2k
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Answer: Answer: PCA result and batch effect?
3.2 years ago by jared.andrews07 ★ 18k
2
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1
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1.4k
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Answer: Answer: For what command-line programs or workflows, do you need a graphical user interf
3.2 years ago by jared.andrews07 ★ 18k
3
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3
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1.9k
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Answer: Answer: Beginner problem: install python3.7.12 but py_available() still return FALSE
3.2 years ago by jared.andrews07 ★ 18k
2
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1
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5.7k
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Answer: Answer: Generating volcano plots of high and low expressed gene in scRNAseq data?
3.2 years ago by jared.andrews07 ★ 18k
0
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1
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6.1k
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Comment: Comment: Finding Subclusters in Seurat Clusters
3.2 years ago by jared.andrews07 ★ 18k
1
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0
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7.9k
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Comment: Comment: Which trajectory method is better !?
3.2 years ago by jared.andrews07 ★ 18k
5
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2
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7.9k
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Answer: Answer: Which trajectory method is better !?
3.2 years ago by jared.andrews07 ★ 18k
3
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0
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1.9k
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Answer: Answer: Is there any software that can use ATAC-seq to identify super enhancer
3.2 years ago by jared.andrews07 ★ 18k
1
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0
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2.0k
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Answer: Answer: Database for Enhancers with Coordinates
3.2 years ago by jared.andrews07 ★ 18k
1
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0
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1.2k
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Answer: Answer: Can SingleR be reused to identify cell types after subsetting the original Seura
3.2 years ago by jared.andrews07 ★ 18k
1
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1
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1.6k
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Answer: Answer: scRNASeq analysis Transcript abundance and gene abundance
3.2 years ago by jared.andrews07 ★ 18k
1
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1
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2.4k
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Answer: Answer: Deseq2 - how to save zero counts on normalization step
3.2 years ago by jared.andrews07 ★ 18k
2
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0
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3.5k
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Answer: Answer: Searching expression for one particular gene in Seurat object issue (Seurat, R)
3.3 years ago by jared.andrews07 ★ 18k
1
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1
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23k
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Comment: Comment: subsetting out cells from seurat object based on expression of 1 gene
3.3 years ago by jared.andrews07 ★ 18k
0
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0
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2.6k
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Comment: Comment: InferCNV how to choose the right reference?
3.3 years ago by jared.andrews07 ★ 18k
1
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1
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2.6k
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Answer: Answer: InferCNV how to choose the right reference?
3.3 years ago by jared.andrews07 ★ 18k
3
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1
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1.6k
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Comment: Comment: Volcano plot not centered at origin
3.3 years ago by jared.andrews07 ★ 18k
1
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0
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3.2k
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Comment: Comment: FASTQC not showing adapters---cutadapt sanity check---
3.3 years ago by jared.andrews07 ★ 18k
1,591 results • Page 10 of 32
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