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Comment: Comment: UMAP vs "rigorous" t-SNE
3.3 years ago by jared.andrews07 ★ 18k
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9.8k
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Answer: Answer: How to download the Homo_sapiens.GRCh38.100.gtf and Homo_sapiens.GRCh38.dna.prim
3.3 years ago by jared.andrews07 ★ 18k
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1
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1.8k
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Comment: Comment: UMAP of TRA/B
3.3 years ago by jared.andrews07 ★ 18k
0
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0
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4.3k
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Comment: Comment: How to display TCR data in tsne space via seurat object
3.3 years ago by jared.andrews07 ★ 18k
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0
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3.2k
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Comment: Comment: Where should a biologist start when learning computational biology & systems bio
3.3 years ago by jared.andrews07 ★ 18k
2
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1
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3.2k
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Comment: Comment: Where should a biologist start when learning computational biology & systems bio
3.3 years ago by jared.andrews07 ★ 18k
1
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1
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1.0k
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Answer: Answer: R script for offspring GO terms
3.3 years ago by jared.andrews07 ★ 18k
2
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1
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1.1k
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Answer: Answer: Center or fix a sample at 0 on PC1 in PCA plot
3.3 years ago by jared.andrews07 ★ 18k
5
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1
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2.3k
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Answer: Answer: Annotating cell types via integrating a query dataset with a reference dataset a
3.3 years ago by jared.andrews07 ★ 18k
0
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0
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64k
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Comment: Comment: In Seurat, How Do nCount_RNA Differ from nFeature_RNA?
3.3 years ago by jared.andrews07 ★ 18k
2
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2.1k
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Answer: Answer: Beginner level projects for bioinformatics.
3.3 years ago by jared.andrews07 ★ 18k
2
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1
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871
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Answer: Answer: Pathway Expression Analysis on Individual Cells?
3.4 years ago by jared.andrews07 ★ 18k
2
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0
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516
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Comment: Comment: FastQC is not recognising that there are adaptors
3.4 years ago by jared.andrews07 ★ 18k
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3.2k
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Comment: Comment: Sequencing depth with 10x Genomics
3.4 years ago by jared.andrews07 ★ 18k
0
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1
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3.2k
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Answer: Answer: Sequencing depth with 10x Genomics
3.4 years ago by jared.andrews07 ★ 18k
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3.5k
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Answer: Answer: how to merge a subset dataset back to master seurat object
3.4 years ago by jared.andrews07 ★ 18k
1
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0
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1.1k
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Comment: Comment: Featurecount mapping is less
3.4 years ago by jared.andrews07 ★ 18k
1
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0
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1.6k
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Comment: Comment: Any Tools to calculate specific gene coverage from BAM file?
3.4 years ago by jared.andrews07 ★ 18k
0
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0
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1.4k
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Comment: Comment: Comparison of two populations of scRNAseq cells
3.4 years ago by jared.andrews07 ★ 18k
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1
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1.0k
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Comment: Comment: scRNA: special help
3.4 years ago by jared.andrews07 ★ 18k
1
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1
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1.0k
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Answer: Answer: scRNA: special help
3.4 years ago by jared.andrews07 ★ 18k
0
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1
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1.4k
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Answer: Answer: Comparison of two populations of scRNAseq cells
3.4 years ago by jared.andrews07 ★ 18k
2
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0
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613
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Answer: Answer: Handling RNA-seq samples from the same individual in DEseq2 analysis
3.4 years ago by jared.andrews07 ★ 18k
3
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1
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2.9k
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Answer: Answer: Adapter trimming
3.4 years ago by jared.andrews07 ★ 18k
2
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2
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2.1k
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Answer: Answer: How install library(DESeq2), library(gplots), library(RColorBrewer) in R?
3.4 years ago by jared.andrews07 ★ 18k
0
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0
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4.1k
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Answer: Answer: Installing and running MACS3
3.4 years ago by jared.andrews07 ★ 18k
2
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0
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39k
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Comment: Comment: bcftools: error while loading shared libraries: libcrypto.so.1.0.0: cannot open
3.4 years ago by jared.andrews07 ★ 18k
1
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0
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39k
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Answer: Answer: bcftools: error while loading shared libraries: libcrypto.so.1.0.0: cannot open
3.4 years ago by jared.andrews07 ★ 18k
0
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1
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2.9k
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Comment: Comment: kallisto pseudoalignment rate is lower than literature
3.4 years ago by jared.andrews07 ★ 18k
0
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0
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5.1k
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Comment: Comment: SingleR annotation of seurat clusters
3.4 years ago by jared.andrews07 ★ 18k
4
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1
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1.3k
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Answer: Answer: Publishing RNA sequencing data analysis scripts on Github before or after Public
3.4 years ago by jared.andrews07 ★ 18k
0
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1
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5.1k
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Comment: Comment: SingleR annotation of seurat clusters
3.4 years ago by jared.andrews07 ★ 18k
1
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1
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5.1k
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Comment: Comment: SingleR annotation of seurat clusters
3.4 years ago by jared.andrews07 ★ 18k
2
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0
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2.0k
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Answer: Answer: What is the best practice for analysing single-cell data with low sequencing dep
3.4 years ago by jared.andrews07 ★ 18k
0
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0
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3.0k
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Answer: Answer: DESeq2 results function not working
3.4 years ago by jared.andrews07 ★ 18k
2
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0
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1.8k
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Answer: Answer: Unusual FastQC Per Base Sequence Content
3.4 years ago by jared.andrews07 ★ 18k
1
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1
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17k
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Comment: Comment: How to identify cell types using addModuleScore function?
3.4 years ago by jared.andrews07 ★ 18k
0
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0
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700
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Answer: Answer: Single-cell atlas
3.5 years ago by jared.andrews07 ★ 18k
2
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1
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816
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Answer: Answer: Detecting RNA Editing in Single-Cell RNA-seq
3.5 years ago by jared.andrews07 ★ 18k
1
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0
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2.0k
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Comment: Comment: Should we keep only the uniquely mapped reads for gene expression
3.5 years ago by jared.andrews07 ★ 18k
3
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2
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2.0k
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Answer: Answer: Should we keep only yhe uniquely mapped reads for gene expression
3.5 years ago by jared.andrews07 ★ 18k
1
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0
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1.2k
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Answer: Answer: Looking for dataset with scRNA-seq data for normal (non cancer, non iPSCs) but
3.5 years ago by jared.andrews07 ★ 18k
0
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1
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2.6k
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Comment: Comment: Defining the threshold for reads and features
3.5 years ago by jared.andrews07 ★ 18k
0
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1
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2.6k
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Answer: Answer: Defining the threshold for reads and features
3.5 years ago by jared.andrews07 ★ 18k
1
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0
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3.2k
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Answer: Answer: Which R function can be used for intersection of genomic coordinates from one fi
3.5 years ago by jared.andrews07 ★ 18k
2
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1
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1.1k
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Answer: Answer: Gene Regulatory Networks on Single Cell RNAseq Datasets
3.5 years ago by jared.andrews07 ★ 18k
0
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0
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1.8k
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Answer: Answer: BioLabDonkey
3.5 years ago by jared.andrews07 ★ 18k
1
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1
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7.1k
views
Comment: Comment: How to create a signature matrix based on a given single cell RNA-seq data
3.5 years ago by jared.andrews07 ★ 18k
1
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0
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1.7k
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Answer: Answer: HeatMap
3.5 years ago by jared.andrews07 ★ 18k
3
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0
replies
2.6k
views
Answer: Answer: Choosing the right pathways among gene set enrichment analysis results
3.5 years ago by jared.andrews07 ★ 18k
1,591 results • Page 11 of 32
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