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2
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569
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Answer: Answer: Demonstrating lack of difference between two peaksets
9 months ago by jared.andrews07 ★ 18k
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0
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1.1k
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
9 months ago by jared.andrews07 ★ 18k
6
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6
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1.1k
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Forum: You have 3 days of zero obligations and expansive resources. What are you building?
hypothetical thought-experiment
9 months ago by jared.andrews07 ★ 18k
0
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1
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508
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Comment: Comment: DiffBind issue in identification of differentially enriched peaks between two co
9 months ago by jared.andrews07 ★ 18k
0
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0
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1.1k
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Comment: Comment: You have 3 days of zero obligations and expansive resources. What are you buildi
9 months ago by jared.andrews07 ★ 18k
1
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0
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443
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Answer: Answer: Huge TPM values in some tissues of an expression atlas
9 months ago by jared.andrews07 ★ 18k
0
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0
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750
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Comment: Comment: igvShiny issues with loading local bams
9 months ago by jared.andrews07 ★ 18k
1
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0
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750
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Comment: Comment: igvShiny issues with loading local bams
9 months ago by jared.andrews07 ★ 18k
2
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0
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675
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Answer: Answer: PCA plot analysis
9 months ago by jared.andrews07 ★ 18k
1
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0
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391
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Comment: Comment: sinto tool
9 months ago by jared.andrews07 ★ 18k
2
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1
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844
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Comment: Comment: IGV signal visualization, low and high signals
9 months ago by jared.andrews07 ★ 18k
2
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1
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396
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Answer: Answer: Sample clustering from 10X single cell
9 months ago by jared.andrews07 ★ 18k
0
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0
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649
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Answer: Answer: How to add motifs in cellranger-arc reference?
9 months ago by jared.andrews07 ★ 18k
1
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0
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426
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Answer: Answer: Pseudo bulking of scATAC-seq
10 months ago by jared.andrews07 ★ 18k
2
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0
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854
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Comment: Comment: scRNA-seq analysis
10 months ago by jared.andrews07 ★ 18k
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0
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417
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Comment: Comment: Question regarding transcript quantification with hybrid seq
10 months ago by jared.andrews07 ★ 18k
0
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1
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10.0k
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Comment: Comment: How to make a complicated dot plot for scRNAseq marker genes with ggplot2?
10 months ago by jared.andrews07 ★ 18k
0
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1
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2.6k
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Comment: Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
10 months ago by jared.andrews07 ★ 18k
1
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0
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2.3k
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Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
10 months ago by jared.andrews07 ★ 18k
2
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2
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2.6k
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Comment: Comment: what's the disadvantage of removing cell-cylcle gene compared with regressing ou
10 months ago by jared.andrews07 ★ 18k
1
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1
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2.3k
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Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
10 months ago by jared.andrews07 ★ 18k
0
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1
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1.3k
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Comment: Comment: Help in choosing the right metric for ranking genes in fgsea
10 months ago by jared.andrews07 ★ 18k
0
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0
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1.1k
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Comment: Comment: Seurat Analysis: Deleting cells from seurat object
10 months ago by jared.andrews07 ★ 18k
0
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0
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1.3k
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Comment: Comment: ROSE called super-enhancers overlapping with promoters
10 months ago by jared.andrews07 ★ 18k
1
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0
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2.3k
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Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
10 months ago by jared.andrews07 ★ 18k
1
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1
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943
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Comment: Comment: Bio-informatics Scientist at BASF | Nunhems (Near Eindhoven, The Netherlands)
10 months ago by jared.andrews07 ★ 18k
1
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0
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908
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Comment: Comment: batch effect correction in 10x genomics single cell sequencing
10 months ago by jared.andrews07 ★ 18k
1
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2
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1.3k
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Answer: Answer: ROSE called super-enhancers overlapping with promoters
11 months ago by jared.andrews07 ★ 18k
1
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1
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2.3k
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Comment: Comment: Hello, I have differential ATAC-seq from control and diseased cells (H3K27ac mar
11 months ago by jared.andrews07 ★ 18k
2
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0
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551
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Comment: Comment: best pipeline for Paired scATAC-seq and scRNA-seq in the same cell - bioinformat
11 months ago by jared.andrews07 ★ 18k
1
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1
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969
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Comment: Comment: No tumour cells in clustering of tumor sample?!
11 months ago by jared.andrews07 ★ 18k
0
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1
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969
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Comment: Comment: No tumour cells in clustering of tumor sample?!
11 months ago by jared.andrews07 ★ 18k
1
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0
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1.1k
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Comment: Comment: Bulk RNA-seq: Different Expression Analysis with DEseq2
11 months ago by jared.andrews07 ★ 18k
2
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1
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969
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Answer: Answer: No tumour cells in clustering of tumor sample?!
11 months ago by jared.andrews07 ★ 18k
2
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2
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1.1k
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Answer: Answer: Seurat Analysis: Deleting cells from seurat object
11 months ago by jared.andrews07 ★ 18k
1
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1
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12k
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Comment: Comment: For CreateSeuratObject, Where Do the Values for min.cells and min.features come
11 months ago by jared.andrews07 ★ 18k
1
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1
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1.2k
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Comment: Comment: DESeq2 heatmap with low baseMean values
11 months ago by jared.andrews07 ★ 18k
0
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0
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1.5k
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Comment: Comment: Batch and Sample correction for downstream analysis using DESeq2
11 months ago by jared.andrews07 ★ 18k
1
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1
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1.5k
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Comment: Comment: Batch and Sample correction for downstream analysis using DESeq2
11 months ago by jared.andrews07 ★ 18k
1
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1
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1.5k
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Comment: Comment: Batch and Sample correction for downstream analysis using DESeq2
11 months ago by jared.andrews07 ★ 18k
2
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1
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1.4k
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Answer: Answer: RNA Contamination Tool for Developing Cell Samples
11 months ago by jared.andrews07 ★ 18k
1
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1
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1.5k
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Answer: Answer: Batch and Sample correction for downstream analysis using DESeq2
11 months ago by jared.andrews07 ★ 18k
0
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0
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696
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Comment: Comment: Single cell visulaisation webtool
12 months ago by jared.andrews07 ★ 18k
1
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0
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1.2k
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Comment: Comment: R ComplexHeatmap - Adujusting the cell size in heatmap
12 months ago by jared.andrews07 ★ 18k
0
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0
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778
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Answer: Answer: Website or tool to obtain a list of genes that participate in a specific process
12 months ago by jared.andrews07 ★ 18k
5
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1
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1.0k
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Answer: Answer: Ambient RNA removal method that generates whole (integer) counts
12 months ago by jared.andrews07 ★ 18k
1
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0
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714
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Answer: Answer: RNA-seq log2 fold change to linear
12 months ago by jared.andrews07 ★ 18k
0
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0
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2.1k
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Comment: Comment: mouse+human cells in 10x scRNA-seq
12 months ago by jared.andrews07 ★ 18k
1
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0
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546
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Answer: Answer: What type of cancer did they study in this paper?
12 months ago by jared.andrews07 ★ 18k
0
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0
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1.0k
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Comment: Comment: Calculation of ChIP-seq normalization factors with non-conventional spike-in ass
13 months ago by jared.andrews07 ★ 18k
1,590 results • Page 4 of 32
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