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0
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0
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1.3k
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scater/scran workflow for batches recompute size factors after MNN?
scater
scran
r
bioconductor
5.6 years ago by
mk
▴ 300
40
votes
6
replies
17k
views
7 follow
Mapping Ensembl Gene IDs with dot suffix
ensembl
gene
biomart
bioconductor
R
updated 16 months ago by
zx8754
12k • written 6.7 years ago by
mk
▴ 300
5
votes
2
replies
1.1k
views
How to submit a genomics package with lots of data to CRAN
CRAN
R
genomics
5.8 years ago by
mk
▴ 300
1
vote
0
replies
1.1k
views
Comment:
C: How to submit a genomics package with lots of data to CRAN
5.8 years ago by
mk
▴ 300
0
votes
0
replies
2.0k
views
Comment:
C: GenomicDataCommons request timeouts cases() %>% ... %>% results_all()
5.8 years ago by
mk
▴ 300
1
vote
1
reply
2.0k
views
Comment:
C: GenomicDataCommons request timeouts cases() %>% ... %>% results_all()
5.9 years ago by
mk
▴ 300
0
votes
1
reply
2.0k
views
Answer:
A: GenomicDataCommons request timeouts cases() %>% ... %>% results_all()
5.9 years ago by
mk
▴ 300
0
votes
0
replies
2.0k
views
Comment:
C: GenomicDataCommons request timeouts cases() %>% ... %>% results_all()
5.9 years ago by
mk
▴ 300
0
votes
0
replies
982
views
CLRS-type algorithms on sna/network
graph
network
ggnetwork
sna
r
6.1 years ago by
mk
▴ 300
0
votes
0
replies
1.8k
views
specify a root in igraph minimum-spanning-tree
igraph
minimum-spanning-tree
directed-graph
r
updated 6.2 years ago by
Biostar
20 • written 6.2 years ago by
mk
▴ 300
3
votes
1
reply
2.6k
views
How to reproduce MATLAB tsne('algorithm', 'exact') result in R?
tsne
pca
R
Rtsne
matlab
6.3 years ago by
mk
▴ 300
0
votes
1
reply
2.4k
views
kmeans error when running reduceDimension(reduction_method = 'DDRTree')
monocle
irlba
kmeans
ddrtree
updated 6.9 years ago by
Kevin Blighe
88k • written 6.9 years ago by
mk
▴ 300
1
vote
0
replies
4.2k
views
Answer:
A: Creation of cellDataSet in Monocle 2 wants undocumented AnnotatedDataFrame: assa
6.9 years ago by
mk
▴ 300
1
vote
2
replies
1.9k
views
Processor count for cores with Intel hyper-threading in differentialGeneTest()
monocle
RNA-Seq
hpc
hyperthreading
written 6.9 years ago by
mk
▴ 300
0
votes
0
replies
1.1k
views
Given two sets of nucleotide n-mers, how can I learn sets of 'motifs' which are present in one and not the other?
sequencing
TF
DNA-Methylation
7.0 years ago by
mk
▴ 300
0
votes
1
reply
2.7k
views
Comment:
C: Linking patient survival to gene-set analysis
7.0 years ago by
mk
▴ 300
5
votes
7
replies
2.7k
views
Linking patient survival to gene-set analysis
GSEA
survival
RNA-Seq
TCGA
updated 7.0 years ago by
Kevin Blighe
88k • written 7.0 years ago by
mk
▴ 300
0
votes
1
reply
2.7k
views
Comment:
C: Linking patient survival to gene-set analysis
7.0 years ago by
mk
▴ 300
0
votes
1
reply
5.7k
views
Comment:
C: GDC API query to map HT-seq FPKM UUID to a Case UUID
7.0 years ago by
mk
▴ 300
0
votes
0
replies
5.7k
views
Comment:
C: GDC API query to map HT-seq FPKM UUID to a Case UUID
7.0 years ago by
mk
▴ 300
0
votes
1
reply
5.7k
views
Comment:
C: GDC API query to map HT-seq FPKM UUID to a Case UUID
7.0 years ago by
mk
▴ 300
9
votes
7
replies
5.7k
views
GDC API query to map HT-seq FPKM UUID to a Case UUID
R
RNA-Seq
TCGA
GDC
7.0 years ago by
mk
▴ 300
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