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Comment: C: How to remove non protein coding genes from single cell pre-mRNA seq?
4.8 years ago by caggtaagtat ★ 1.9k
1
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0
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795
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Answer: A: How to colour all points that agree with multiple conditions
4.8 years ago by caggtaagtat ★ 1.9k
1
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1
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3.8k
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Comment: C: Need help with STAR aligner
4.8 years ago by caggtaagtat ★ 1.9k
1
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0
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2.5k
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Answer: A: Genes vs transcripts in RNA-seq analysis
4.8 years ago by caggtaagtat ★ 1.9k
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1
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5.9k
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Comment: C: Running STAR with --twopassMode Basic
4.8 years ago by caggtaagtat ★ 1.9k
2
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0
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2.6k
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Answer: A: What sequence do I get when using paired-end stranded protocol
4.9 years ago by caggtaagtat ★ 1.9k
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1
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5.3k
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Comment: C: DEseq2 results differs greatly when comparing output from STAR/featureCounts and
4.9 years ago by caggtaagtat ★ 1.9k
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0
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1.5k
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Comment: C: Differential gene expression analysis
4.9 years ago by caggtaagtat ★ 1.9k
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0
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8.3k
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Comment: C: Where can I find mouse Gene MatriX file format (GMT)?
5.1 years ago by caggtaagtat ★ 1.9k
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0
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1.4k
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Comment: C: Get read counts for reads overlapping exon-intron junction from STAR-output
5.1 years ago by caggtaagtat ★ 1.9k
0
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1
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1.4k
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Comment: C: Get splice-read counts from STAR-output
5.1 years ago by caggtaagtat ★ 1.9k
1
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1
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1.4k
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Answer: A: Get splice-read counts from STAR-output
5.1 years ago by caggtaagtat ★ 1.9k
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0
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914
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Comment: C: Whats best practice for Gene set enrichment analysis?
5.1 years ago by caggtaagtat ★ 1.9k
1
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2
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914
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Whats best practice for Gene set enrichment analysis?
GSEA
updated 5.1 years ago by 7.6k • written 5.1 years ago by ★ 1.9k
0
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0
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2.7k
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Comment: C: Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37
5.2 years ago by caggtaagtat ★ 1.9k
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1
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2.7k
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Answer: A: Is it possible to obtain all the RefSeq transcripts of Ensembl genes for GRCh37
5.2 years ago by caggtaagtat ★ 1.9k
2
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1
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10k
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Answer: A: STAR alignment EXITING because of FATAL ERROR: could not create output file
5.3 years ago by caggtaagtat ★ 1.9k
3
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0
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1.1k
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Answer: A: Identification of Human Genes ?
5.4 years ago by caggtaagtat ★ 1.9k
1
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1
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729
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Answer: A: Cis-regulatory motif discovery from RNA-Seq
5.4 years ago by caggtaagtat ★ 1.9k
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0
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10.0k
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Comment: C: snakemake: pipeline failed with MissingOutputException
5.4 years ago by caggtaagtat ★ 1.9k
0
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0
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10.0k
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Comment: C: snakemake: pipeline failed with MissingOutputException
5.4 years ago by caggtaagtat ★ 1.9k
0
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2
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10.0k
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Comment: C: snakemake: pipeline failed when submit to cluster
5.4 years ago by caggtaagtat ★ 1.9k
0
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1
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10.0k
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Answer: A: snakemake: pipeline failed when submit to cluster
5.4 years ago by caggtaagtat ★ 1.9k
1
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0
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5.9k
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Comment: C: Running STAR with --twopassMode Basic
5.4 years ago by caggtaagtat ★ 1.9k
9
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2
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5.9k
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Answer: A: Running STAR with --twopassMode Basic
5.4 years ago by caggtaagtat ★ 1.9k
0
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0
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10k
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Comment: C: STAR mapping results
5.4 years ago by caggtaagtat ★ 1.9k
1
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1
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2.8k
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Comment: C: RNAseq differential expression analysis : no significative FDR but significative
5.5 years ago by caggtaagtat ★ 1.9k
0
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0
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10k
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Comment: C: STAR mapping results
5.6 years ago by caggtaagtat ★ 1.9k
2
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1
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744
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Answer: A: Making genome-wide transcription level track from transcript level count
5.6 years ago by caggtaagtat ★ 1.9k
0
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1
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10k
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Comment: C: STAR mapping results
5.6 years ago by caggtaagtat ★ 1.9k
1
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0
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1.3k
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Answer: A: dUTP sequencing -- different strand-ratios for different samples
5.6 years ago by caggtaagtat ★ 1.9k
0
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0
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7.8k
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Comment: C: deseq2 or edgeR
5.6 years ago by caggtaagtat ★ 1.9k
0
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1
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7.8k
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Comment: C: deseq2 or edgeR
5.6 years ago by caggtaagtat ★ 1.9k
0
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0
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7.8k
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Comment: C: deseq2 or edgeR
5.6 years ago by caggtaagtat ★ 1.9k
3
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1
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7.8k
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Comment: C: deseq2 or edgeR
5.6 years ago by caggtaagtat ★ 1.9k
4
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1
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7.8k
views
Answer: A: deseq2 or edgeR
5.6 years ago by caggtaagtat ★ 1.9k
0
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1
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7.8k
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Comment: C: deseq2 or edgeR
5.6 years ago by caggtaagtat ★ 1.9k
1
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0
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2.1k
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Comment: C: If I am in a right way in RNA-seq
5.6 years ago by caggtaagtat ★ 1.9k
0
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0
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3.7k
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Comment: C: How to create custom gtf annotation file?
5.7 years ago by caggtaagtat ★ 1.9k
1
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1
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3.7k
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Comment: A: How to create custom gtf annotation file?
5.7 years ago by caggtaagtat ★ 1.9k
3
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1
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3.7k
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Comment: C: How to create custom gtf annotation file?
5.7 years ago by caggtaagtat ★ 1.9k
1
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0
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1.6k
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Answer: A: gene prediction without GT-AG splice site bias
5.7 years ago by caggtaagtat ★ 1.9k
0
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0
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2.7k
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Comment: C: Should I generate a new Index genome in STAR for 50 base reads instead of 100 ba
5.7 years ago by caggtaagtat ★ 1.9k
0
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1
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2.7k
views
Answer: A: Should I generate a new Index genome in STAR for 50 base reads instead of 100 ba
5.7 years ago by caggtaagtat ★ 1.9k
2
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2
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981
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Evolutionary distance from as many organisms as possible to humans
genome relation evolutionary distance
5.7 years ago by caggtaagtat ★ 1.9k
0
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0
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981
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Comment: C: Evolutionary distance from as many organisms as possible to humans
5.7 years ago by caggtaagtat ★ 1.9k
0
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0
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5.6k
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Comment: C: Very low percentage of assigned reads using featureCounts
5.7 years ago by caggtaagtat ★ 1.9k
0
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1
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5.6k
views
Comment: C: Very low percentage of assigned reads using featureCounts
5.7 years ago by caggtaagtat ★ 1.9k
0
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1
reply
5.6k
views
Comment: C: Very low percentage of assigned reads using featureCounts
5.7 years ago by caggtaagtat ★ 1.9k
0
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0
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3.4k
views
Answer: A: Running SortMeRNA for bulk RNAseq data
5.8 years ago by caggtaagtat ★ 1.9k
272 results • Page 2 of 6
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