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2.8k
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Comment: C: Parsing RepeatMasker Output Files
5.9 years ago by corend ▴ 70
0
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0
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3.7k
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Comment: C: bedtools intersect with match on name column
6.0 years ago by corend ▴ 70
5
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5
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3.7k
views
bedtools intersect with match on name column
bedtools intersectbed
6.0 years ago by corend ▴ 70
1
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0
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3.7k
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Answer: A: bedtools intersect with match on name column
6.0 years ago by corend ▴ 70
0
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1
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3.7k
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Comment: C: bedtools intersect with match on name column
6.0 years ago by corend ▴ 70
8
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10
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4.5k
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Ballgown finds few DE genes compared to DESeq
RNA-Seq DESeq2 Ballgown
updated 6.1 years ago by • 0 • written 6.4 years ago by ▴ 70
0
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0
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6.2k
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Comment: C: What is the ideal FDR and fold change cutoff to consider in a RNA-seq experiment
6.1 years ago by corend ▴ 70
0
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0
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2.2k
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Comment: C: Mapping to repeat consensus sequences?
6.1 years ago by corend ▴ 70
1
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2
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2.2k
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Comment: C: Mapping to repeat consensus sequences?
6.1 years ago by corend ▴ 70
1
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0
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1.0k
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Answer: C: isolate the output of lignment in fastq format
6.1 years ago by corend ▴ 70
0
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0
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1.9k
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Comment: C: Why are GC% per base important in quality control of reads?
6.1 years ago by corend ▴ 70
0
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1
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2.8k
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Comment: C: RNA-seq analysis of two species
6.2 years ago by corend ▴ 70
0
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1
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2.8k
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Comment: C: RNA-seq analysis of two species
6.2 years ago by corend ▴ 70
0
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1
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2.8k
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Comment: C: RNA-seq analysis of two species
6.2 years ago by corend ▴ 70
5
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7
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2.0k
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RNAseq analysis with very close species
RNA-Seq
6.2 years ago by corend ▴ 70
0
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1
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2.0k
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Comment: C: RNAseq analysis with very close species
6.2 years ago by corend ▴ 70
0
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0
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2.0k
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Comment: C: RNAseq analysis with very close species
6.2 years ago by corend ▴ 70
0
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1
reply
2.0k
views
Comment: C: RNAseq analysis with very close species
6.2 years ago by corend ▴ 70
0
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1
reply
4.4k
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Comment: C: Hisat2 multimapped reads
6.3 years ago by corend ▴ 70
0
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0
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4.4k
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Comment: C: Hisat2 multimapped reads
6.3 years ago by corend ▴ 70
2
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5
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4.4k
views
Hisat2 multimapped reads
RNA-Seq alignment hisat2
updated 6.3 years ago by 104k • written 6.3 years ago by ▴ 70
0
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0
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4.5k
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Comment: C: Ballgown finds few DE genes compared to DESeq
6.4 years ago by corend ▴ 70
0
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1
reply
4.5k
views
Comment: C: Ballgown finds few DE genes compared to DESeq
6.4 years ago by corend ▴ 70
0
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0
replies
4.5k
views
Comment: C: Ballgown finds few DE genes compared to DESeq
6.4 years ago by corend ▴ 70
0
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1
reply
4.2k
views
Comment: C: A very short gene with very high TPM
6.8 years ago by corend ▴ 70
0
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1
reply
4.2k
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Comment: C: A very short gene with very high TPM
6.8 years ago by corend ▴ 70
10
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18
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4.2k
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6 follow
A very short gene with very high TPM
RNA-Seq Assembly
updated 6.8 years ago by 9.0k • written 6.8 years ago by ▴ 70
0
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0
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4.2k
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Comment: C: A very short gene with very high TPM
6.8 years ago by corend ▴ 70
0
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0
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4.2k
views
Comment: C: A very short gene with very high TPM
6.8 years ago by corend ▴ 70
1
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1
reply
4.2k
views
Comment: C: A very short gene with very high TPM
6.8 years ago by corend ▴ 70
0
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2
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4.2k
views
Comment: C: A very short gene with very high TPM
6.8 years ago by corend ▴ 70
0
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0
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3.4k
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Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
0
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1
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3.4k
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Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
0
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1
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3.4k
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Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
0
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1
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3.4k
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Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
0
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0
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3.4k
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Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
0
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1
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3.4k
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Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
0
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2
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3.4k
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Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
0
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1
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3.4k
views
Comment: C: Why does cufflinks split this transcript?
6.9 years ago by corend ▴ 70
8
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20
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3.4k
views
Why does cufflinks split this transcript?
RNA-Seq cufflinks assembly
6.9 years ago by corend ▴ 70
3
votes
1
reply
2.0k
views
What is an "unanchored contig"?
sequencing Assembly
updated 6.9 years ago by 35k • written 6.9 years ago by ▴ 70
0
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1
reply
2.4k
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Comment: C: How to get an XS field in SAM with unstranded data ?
7.0 years ago by corend ▴ 70
4
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7
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2.4k
views
How to get an XS field in SAM with unstranded data ?
cufflinks RNA-Seq alignment
updated 7.0 years ago by 9.0k • written 7.0 years ago by ▴ 70
0
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0
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2.4k
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Comment: C: How to get an XS field in SAM with unstranded data ?
7.0 years ago by corend ▴ 70
0
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0
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2.4k
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Comment: C: How to get an XS file in SAM with unstranded data ?
7.0 years ago by corend ▴ 70
0
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0
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1.7k
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Comment: C: DESeq2 biais when genes are missing from the annotation?
7.0 years ago by corend ▴ 70
0
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0
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1.7k
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Comment: C: DESeq2 biais when genes are missing from the annotation?
7.0 years ago by corend ▴ 70
4
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4
replies
1.7k
views
DESeq2 biais when genes are missing from the annotation?
RNA-Seq DESeq2
updated 7.0 years ago by 35k • written 7.0 years ago by ▴ 70
0
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1
reply
1.4k
views
Retrieve genes with more than N paralogs on ensembl
genome gene ensembl
updated 7.1 years ago by 27k • written 7.1 years ago by ▴ 70
0
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1
reply
2.1k
views
cummeRbund grouping by TSS / CDS / Isoforms
RNA-Seq cufflinks cummerbund
updated 7.1 years ago by ★ 4.1k • written 7.1 years ago by ▴ 70
51 results • Page 1 of 2
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