Latest
Open
Jobs
Tutorials
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
Open
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Profile
Posts
Awards
Show
all
questions
tools
blogs
news
tutorials
forum
answers
comments
0
votes
0
replies
2.2k
views
Comment:
C: gcRMA normalize and run differential expression for signal intensity data withou
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
1.2k
views
Comment:
C: bioinformatics tools to connect modifications on RNA to its structure
5.7 years ago by
shawn.w.foley
★ 1.3k
1
vote
2
replies
2.2k
views
gcRMA normalize and run differential expression for signal intensity data without CEL files
microarray
limma
gcrma
illumina
updated 5.7 years ago by
Kevin Blighe
88k • written 5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
1.2k
views
Comment:
C: bioinformatics tools to connect modifications on RNA to its structure
5.7 years ago by
shawn.w.foley
★ 1.3k
3
votes
1
reply
1.1k
views
Answer:
A: Extract and retain only chromosome info in GWAS sumstats file
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
931
views
Answer:
A: Can detection of SNP from DNA (Intronic part) and mRNA (Exonic Part) make some
5.7 years ago by
shawn.w.foley
★ 1.3k
1
vote
2
replies
7.9k
views
Answer:
A: How to group gene dataset and run t.test for each row for every gene in R?
5.7 years ago by
shawn.w.foley
★ 1.3k
3
votes
2
replies
5.8k
views
ChIP-seq differential binding with multiple replicates using MACS2 bdgdiff.
ChIP-Seq
MACS2
bdgdiff
updated 5.7 years ago by
ATpoint
86k • written 6.8 years ago by
shawn.w.foley
★ 1.3k
1
vote
1
reply
4.0k
views
Comment:
C: CCLE miRNA expression data
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
4.0k
views
Answer:
A: CCLE miRNA expression data
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
3.2k
views
Comment:
C: Should I keep all HTSeq table informations for edgeR analysis?
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
3.2k
views
Answer:
A: Should I keep all HTSeq table informations for edgeR analysis?
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
3.3k
views
Comment:
C: upSet R plot for variant calling
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
1.8k
views
Comment:
C: Tool to perform GSEA on mapped genes
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
1.4k
views
Answer:
A: Variants in Exon or Intron
5.7 years ago by
shawn.w.foley
★ 1.3k
1
vote
0
replies
1.8k
views
Answer:
A: Tool to perform GSEA on mapped genes
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
2.1k
views
Answer:
A: Estimate percentage of alternative splicing
5.7 years ago by
shawn.w.foley
★ 1.3k
1
vote
0
replies
917
views
Comment:
C: Including bioinformatics into an agriculture/horticulture dissertation project
5.7 years ago by
shawn.w.foley
★ 1.3k
1
vote
1
reply
917
views
Comment:
C: Including bioinformatics into an agriculture/horticulture dissertation project
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
2.5k
views
Comment:
C: Question about differentially expressed genes selection for low sample size data
5.7 years ago by
shawn.w.foley
★ 1.3k
2
votes
1
reply
2.5k
views
Comment:
C: Question about differentially expressed genes selection for low sample size data
5.7 years ago by
shawn.w.foley
★ 1.3k
3
votes
2
replies
2.5k
views
Answer:
A: Question about differentially expressed genes selection for low sample size data
5.7 years ago by
shawn.w.foley
★ 1.3k
2
votes
1
reply
2.6k
views
Mutect2 "somatic" variants with resistant tissue culture lines
mutect2
wes
variants
genotyping
GATK
updated 5.7 years ago by
Biostar
20 • written 5.8 years ago by
shawn.w.foley
★ 1.3k
4
votes
1
reply
965
views
Answer:
A: Trouble manipulating dataset
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
1.4k
views
Comment:
C: Something strange in RNA-seq raw reads, It is contamination or not?
5.7 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
1.4k
views
Answer:
A: Something strange in RNA-seq raw reads, It is contamination or not?
5.8 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
2.5k
views
Comment:
C: Is it possible to convert .CHP files to .CEL?
5.8 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
5.7k
views
Comment:
C: Fold change cut off enrichment analysis
5.8 years ago by
shawn.w.foley
★ 1.3k
1
vote
1
reply
5.7k
views
Answer:
A: Fold change cut off enrichment analysis
5.8 years ago by
shawn.w.foley
★ 1.3k
1
vote
0
replies
2.5k
views
Comment:
C: Multiple testing correction issue
5.8 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
2.5k
views
Answer:
A: Multiple testing correction issue
5.8 years ago by
shawn.w.foley
★ 1.3k
1
vote
1
reply
1.6k
views
Comment:
C: RNA Seq analysis of rice samples
5.8 years ago by
shawn.w.foley
★ 1.3k
2
votes
0
replies
2.3k
views
Answer:
A: RNA-Seq Analysis with DEXSeq
5.8 years ago by
shawn.w.foley
★ 1.3k
1
vote
0
replies
3.8k
views
Comment:
C: which statistical test use for differential expression with qPCR
5.8 years ago by
shawn.w.foley
★ 1.3k
3
votes
0
replies
1.3k
views
Answer:
A: RIP-seq identifing reverse complement reads between smallRNA and targeted mRNA
5.8 years ago by
shawn.w.foley
★ 1.3k
1
vote
1
reply
1.3k
views
Comment:
C: RIP-seq identifing reverse complement reads between smallRNA and targeted mRNA
5.8 years ago by
shawn.w.foley
★ 1.3k
1
vote
1
reply
1.3k
views
Comment:
C: RIP-seq identifing reverse complement reads between smallRNA and targeted mRNA
5.8 years ago by
shawn.w.foley
★ 1.3k
2
votes
1
reply
8.7k
views
Comment:
C: Middle author, but not first author projects. How would you approach this?
5.8 years ago by
shawn.w.foley
★ 1.3k
4
votes
1
reply
8.7k
views
Comment:
C: Middle author, but not first author projects. How would you approach this?
5.8 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
1.9k
views
Answer:
A: Statistics on differentially expressed genes
5.8 years ago by
shawn.w.foley
★ 1.3k
2
votes
0
replies
1.2k
views
Answer:
A: Writing scripts for a single vs all chromosomes
5.9 years ago by
shawn.w.foley
★ 1.3k
2
votes
1
reply
2.7k
views
Answer:
C: Post PCA analysis
5.9 years ago by
shawn.w.foley
★ 1.3k
0
votes
0
replies
2.6k
views
Comment:
C: CLIP-seq peak analysis
5.9 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
2.6k
views
Comment:
C: CLIP-seq peak analysis
5.9 years ago by
shawn.w.foley
★ 1.3k
1
vote
1
reply
2.4k
views
Comment:
C: Differential gene expression DESeq2
5.9 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
2.6k
views
Comment:
C: CLIP-seq peak analysis
5.9 years ago by
shawn.w.foley
★ 1.3k
0
votes
1
reply
3.4k
views
Comment:
C: Some problems with DEXSEQ analyse
5.9 years ago by
shawn.w.foley
★ 1.3k
2
votes
0
replies
2.6k
views
Answer:
A: Transcription factor binding sites using ATAC-seq peaks
5.9 years ago by
shawn.w.foley
★ 1.3k
2
votes
1
reply
2.6k
views
Answer:
A: CLIP-seq peak analysis
5.9 years ago by
shawn.w.foley
★ 1.3k
2
votes
1
reply
2.2k
views
Comment:
C: Interpreting DEseq2 results
5.9 years ago by
shawn.w.foley
★ 1.3k
131 results • Page
2 of 3
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6