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Answer: A: Conditionally apply Biostrings reverseComplement on a DNAStringSet
5.1 years ago by Mark ★ 1.6k
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939
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Comment: C: how to compare statistics differences for APA
5.1 years ago by Mark ★ 1.6k
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1
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2.3k
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Comment: C: GSEA Must be finite.
5.1 years ago by Mark ★ 1.6k
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1
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1.6k
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Comment: C: gatk v4.14.0 does not recognize matematical operators
5.1 years ago by Mark ★ 1.6k
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1
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1.2k
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Comment: C: How to select pairs to have a significant sample for similarity
5.1 years ago by Mark ★ 1.6k
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1
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1.6k
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Comment: C: gatk v4.14.0 does not recognize matematical operators
5.1 years ago by Mark ★ 1.6k
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0
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2.1k
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Comment: C: Using StringTie output GTF with featureCounts to assign reads- low assigned perc
5.1 years ago by Mark ★ 1.6k
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1
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1.6k
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Answer: A: gatk v4.14.0 does not recognize matematical operators
5.1 years ago by Mark ★ 1.6k
0
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1
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842
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Comment: C: protein Sequences from whole genome data
5.1 years ago by Mark ★ 1.6k
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1
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1.3k
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Comment: C: Can FASTQ header tags be added to SAM file output from bowtie?
5.1 years ago by Mark ★ 1.6k
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788
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Comment: C: Phages sequencing anaysis
5.1 years ago by Mark ★ 1.6k
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2.3k
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Answer: A: GSEA Must be finite.
5.1 years ago by Mark ★ 1.6k
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3.1k
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Answer: A: Missing SNPs in sequencing.com from BAM file
5.1 years ago by Mark ★ 1.6k
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1.5k
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Comment: C: Why is VCFTools excluding so many SNPs in its Tajima D calculation?
5.1 years ago by Mark ★ 1.6k
2
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0
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1.9k
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Answer: A: single cell sequencing datasets batch effect
5.1 years ago by Mark ★ 1.6k
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1
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1.7k
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Comment: C: How do I decide between building a kmer-based or snp-based tree?
5.1 years ago by Mark ★ 1.6k
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1
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5.5k
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Comment: C: R: Plotting MSMC/PSMC results using ggplot2
5.1 years ago by Mark ★ 1.6k
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0
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4.4k
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Answer: A: Which fit to consider in DESeq2? Local, Parametric or Mean
5.1 years ago by Mark ★ 1.6k
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1
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842
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Comment: C: protein Sequences from whole genome data
5.1 years ago by Mark ★ 1.6k
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1.2k
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Comment: C: STAR mapping statistics don't add up with samtools count
5.1 years ago by Mark ★ 1.6k
0
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0
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1.1k
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Comment: C: Problem with allele frequency calculation in vcf
5.1 years ago by Mark ★ 1.6k
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1
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1.4k
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Comment: C: Using joiningdata/lollipops to make lollipop chart
5.1 years ago by Mark ★ 1.6k
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0
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832
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Answer: A: bedtools not working properly
5.1 years ago by Mark ★ 1.6k
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1
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9.5k
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Comment: C: STAR mapping results
5.1 years ago by Mark ★ 1.6k
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1
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1.2k
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Comment: C: Finding the "end point" of biological pathways
5.1 years ago by Mark ★ 1.6k
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1.2k
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Comment: C: How to get individual MQ and raw allele counts from a BAM?
5.1 years ago by Mark ★ 1.6k
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2.1k
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Answer: A: Determine number and length of plasmids in bacterial genome (using something lik
5.1 years ago by Mark ★ 1.6k
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0
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1.1k
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Comment: C: Determine all "mobile DNAs" in an assembled bacteria genome (using something lik
5.1 years ago by Mark ★ 1.6k
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0
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3.8k
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Comment: C: How to perform local realignment around indels without a known vcf file of indel
5.1 years ago by Mark ★ 1.6k
6
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1
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3.8k
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Answer: A: How to perform local realignment around indels without a known vcf file of indel
5.1 years ago by Mark ★ 1.6k
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0
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1.4k
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Comment: C: Parsing an ExpressionSet for all SRA addresses
5.1 years ago by Mark ★ 1.6k
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1
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2.6k
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Comment: C: What is in your opinion the current state-of-the-art sequencing platform for gen
5.1 years ago by Mark ★ 1.6k
3
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1
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1.4k
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Answer: A: Parsing an ExpressionSet for all SRA addresses
5.1 years ago by Mark ★ 1.6k
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0
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1.8k
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Answer: A: Any web based tool to depict long list of GO terms
5.1 years ago by Mark ★ 1.6k
0
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0
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1.8k
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Answer: A: SnpEff using -onlyprotein option (meaning-Only use protein coding transcripts)
5.1 years ago by Mark ★ 1.6k
0
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1
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2.1k
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Answer: A: Using StringTie output GTF with featureCounts to assign reads- low assigned perc
5.1 years ago by Mark ★ 1.6k
2
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1
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1.4k
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Answer: A: bulk-RNAseq Endogenous retrovirus (ERV) Analysis for mouse
5.1 years ago by Mark ★ 1.6k
0
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1
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2.8k
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Answer: A: Extract metadata with a list of sequence accession number, is it possible?
6.1 years ago by Mark ★ 1.6k
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0
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1.4k
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Comment: C: SimpleRleList to GRanges
6.1 years ago by Mark ★ 1.6k
5
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3
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2.0k
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STAR alignment results in large chunks of NNNNNs
RNA-Seq alignment sequencing
updated 6.2 years ago by 20 • written 6.2 years ago by ★ 1.6k
0
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2
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5.1k
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Comment: C: GSEA results change in clusterProfiler
6.2 years ago by Mark ★ 1.6k
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0
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2.0k
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Comment: C: qiime error join read
6.2 years ago by Mark ★ 1.6k
1
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1
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7.0k
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Answer: A: Using Limma to normalize data sets from microarray studies
6.2 years ago by Mark ★ 1.6k
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1.1k
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Comment: C: How to change genes name
6.2 years ago by Mark ★ 1.6k
0
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1
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12k
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Comment: A: Calculating percentage of reads mapped to a reference genome
6.2 years ago by Mark ★ 1.6k
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0
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2.0k
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Comment: C: STAR alignment results in large chunks of NNNNNs
6.2 years ago by Mark ★ 1.6k
0
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0
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14k
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Comment: C: STAR alignment killed
6.3 years ago by Mark ★ 1.6k
1
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0
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3.0k
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Comment: A: How to access the score of a parsimony tree using biopython
6.3 years ago by Mark ★ 1.6k
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0
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3.8k
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Answer: A: Convert Gene stable ID to Gene Symbol
6.3 years ago by Mark ★ 1.6k
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0
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18k
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Comment: C: file' must be a character string or connection Error
6.3 years ago by Mark ★ 1.6k
316 results • Page 6 of 7
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