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1
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2
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868
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Copy number variation data for population structure analysis
CNV
updated 2.1 years ago by ▴ 10 • written 4.2 years ago by ▴ 90
0
votes
7
replies
5.2k
views
B allele frequency (BAF)
snp
updated 6 months ago by ▴ 10 • written 4.2 years ago by ▴ 90
0
votes
1
reply
5.2k
views
Comment: C: B allele frequency (BAF)
4.2 years ago by rthapa ▴ 90
0
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0
replies
5.2k
views
Comment: C: B allele frequency (BAF)
4.2 years ago by rthapa ▴ 90
0
votes
0
replies
1.5k
views
Comment: C: KaryoploteR for copy number
4.4 years ago by rthapa ▴ 90
0
votes
3
replies
1.5k
views
KaryoploteR for copy number
genome KaryoploteR
updated 4.4 years ago by 8.7k • written 4.4 years ago by ▴ 90
3
votes
1
reply
2.8k
views
quality check of vcf files
vcf SNP
updated 4.5 years ago by ▴ 370 • written 4.5 years ago by ▴ 90
0
votes
0
replies
746
views
CNVRs visualization with karyoploteR
cnv
4.5 years ago by rthapa ▴ 90
0
votes
0
replies
631
views
Phenotypic evaluation of significant SNPs from GWAS result
SNP
4.6 years ago by rthapa ▴ 90
0
votes
0
replies
891
views
GWAS of ordinal phenotypes with MCMCglmm model
SNP r
4.7 years ago by rthapa ▴ 90
0
votes
0
replies
4.8k
views
Comment: C: error reading bed files for bedtools intersect
4.9 years ago by rthapa ▴ 90
0
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1
reply
4.8k
views
Comment: C: error reading bed files for bedtools intersect
4.9 years ago by rthapa ▴ 90
0
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0
replies
4.8k
views
Comment: C: error reading bed files for bedtools intersect
4.9 years ago by rthapa ▴ 90
0
votes
1
reply
4.8k
views
Comment: C: error reading bed files for bedtools intersect
4.9 years ago by rthapa ▴ 90
0
votes
2
replies
4.8k
views
Comment: C: error reading bed files for bedtools intersect
4.9 years ago by rthapa ▴ 90
0
votes
0
replies
4.8k
views
Comment: C: error reading bed files for bedtools intersect
4.9 years ago by rthapa ▴ 90
0
votes
12
replies
4.8k
views
error reading bed files for bedtools intersect
bedtools intersect
updated 4.9 years ago by 164k • written 4.9 years ago by ▴ 90
0
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0
replies
4.8k
views
Comment: C: error reading bed files for bedtools intersect
4.9 years ago by rthapa ▴ 90
0
votes
0
replies
1.3k
views
GO term using GOAtools
GOAtools
4.9 years ago by rthapa ▴ 90
0
votes
1
reply
917
views
Comment: C: methylation coverage in the gene region
5.1 years ago by rthapa ▴ 90
0
votes
3
replies
917
views
methylation coverage in the gene region
methylation
5.1 years ago by rthapa ▴ 90
2
votes
0
replies
8.6k
views
Comment: C: Bedtools problem : It looks as though you have less than 3 columns at line: 1.
5.1 years ago by rthapa ▴ 90
0
votes
1
reply
8.6k
views
Answer: A: Bedtools problem : It looks as though you have less than 3 columns at line: 1.
5.1 years ago by rthapa ▴ 90
0
votes
0
replies
895
views
codon adaptation index (CAI) estimation
codon usage
5.1 years ago by rthapa ▴ 90
0
votes
0
replies
932
views
codon bias estimation (CAI)
protein
5.1 years ago by rthapa ▴ 90
1
vote
1
reply
1.1k
views
methylation coverage in the gene region
methylation
updated 5.1 years ago by 85k • written 5.1 years ago by ▴ 90
0
votes
1
reply
1.2k
views
Comment: C: coverage of narrow peaks on genomic region using bedtools
5.1 years ago by rthapa ▴ 90
1
vote
3
replies
1.2k
views
coverage of narrow peaks on genomic region using bedtools
ChIP-Seq
updated 5.1 years ago by ★ 3.8k • written 5.1 years ago by ▴ 90
0
votes
0
replies
5.8k
views
Comment: C: pysam alignment error
5.1 years ago by rthapa ▴ 90
0
votes
1
reply
5.8k
views
Comment: C: pysam alignment error
5.1 years ago by rthapa ▴ 90
0
votes
0
replies
5.8k
views
Comment: C: pysam alignment error
5.1 years ago by rthapa ▴ 90
0
votes
1
reply
5.8k
views
Comment: C: pysam alignment error
5.1 years ago by rthapa ▴ 90
0
votes
0
replies
5.8k
views
Comment: C: pysam alignment error
5.1 years ago by rthapa ▴ 90
0
votes
1
reply
5.8k
views
Comment: C: pysam alignment error
5.1 years ago by rthapa ▴ 90
4
votes
13
replies
5.8k
views
pysam alignment error
alignment
updated 5.1 years ago by ▴ 580 • written 5.1 years ago by ▴ 90
0
votes
1
reply
799
views
parent GO terms
genome
5.1 years ago by rthapa ▴ 90
3
votes
1
reply
927
views
Chip seq coverage
ChIP-Seq
5.1 years ago by rthapa ▴ 90
0
votes
0
replies
684
views
SNP density per genes
SNP
5.1 years ago by rthapa ▴ 90
0
votes
0
replies
4.8k
views
Comment: C: CAI in python: SeqUtils.CodonUsage vs CAI package
5.2 years ago by rthapa ▴ 90
0
votes
0
replies
805
views
Maximum intensity among overlapping peaks and peak coverage
ChIP-Seq
5.2 years ago by rthapa ▴ 90
0
votes
1
reply
1.9k
views
DESeq2 lfc shrinkage
rna-seq
updated 5.5 years ago by ▴ 480 • written 6.9 years ago by ▴ 90
0
votes
1
reply
863
views
Significance level of each variable used in the model
RNA-Seq
updated 5.7 years ago by 88k • written 5.7 years ago by ▴ 90
0
votes
0
replies
4.4k
views
Comment: C: ANOVA or Linear regression for RNAseq data analysis with 3 factors
updated 5.7 years ago by 88k • written 5.7 years ago by ▴ 90
0
votes
0
replies
3.7k
views
Comment: C: Preforming differential expression (DE) on edgeR with control and different geno
5.7 years ago by rthapa ▴ 90
0
votes
1
reply
4.4k
views
Comment: C: ANOVA or Linear regression for RNAseq data analysis with 3 factors
5.7 years ago by rthapa ▴ 90
0
votes
0
replies
3.7k
views
Comment: C: What are the requirements to use data generated in other microarray experiments
5.7 years ago by rthapa ▴ 90
0
votes
1
reply
922
views
Haplotypes analysis from SNP chip data
SNP
updated 5.7 years ago by 88k • written 5.7 years ago by ▴ 90
0
votes
0
replies
2.5k
views
Comment: C: r2 and LD value estimation between significant SNPs identified from GWAS
5.7 years ago by rthapa ▴ 90
1
vote
2
replies
2.5k
views
r2 and LD value estimation between significant SNPs identified from GWAS
SNP R
5.7 years ago by rthapa ▴ 90
0
votes
1
reply
760
views
Comparison of samples of different read lengths in differential gene expression analysis
RNA-Seq
updated 5.8 years ago by 14k • written 5.8 years ago by ▴ 90
107 results • Page 2 of 3
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