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Comment: Comment: Genewiz gave me bam files instead of fasta files- can I convert bam to fasta to
3.3 years ago by swbarnes2 14k
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Comment: Comment: relationship between DE-genes and DE-trascripts in deseq2
3.3 years ago by swbarnes2 14k
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Comment: Comment: DEGs with uninsteresed sample files
3.3 years ago by swbarnes2 14k
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Answer: Answer: DEGs with uninsteresed sample files
3.3 years ago by swbarnes2 14k
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Comment: Comment: Counts all read zero after alignment?
3.3 years ago by swbarnes2 14k
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Answer: Answer: Missing read group in BAM files
3.3 years ago by swbarnes2 14k
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Comment: Comment: MarkduplicatesSpark How to speed-up ?
3.3 years ago by swbarnes2 14k
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Answer: Answer: RNA Seq
3.3 years ago by swbarnes2 14k
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Comment: Comment: Counts all read zero after alignment?
3.3 years ago by swbarnes2 14k
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1.5k
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Comment: Comment: how htseq-count counts unstranded RNA-seq data
3.3 years ago by swbarnes2 14k
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1.5k
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Answer: Answer: how htseq-count counts unstranded RNA-seq data
3.3 years ago by swbarnes2 14k
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Comment: Comment: STAR split reads into two strands
3.3 years ago by swbarnes2 14k
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3.3k
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Comment: Comment: STAR split reads into two strands
3.3 years ago by swbarnes2 14k
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3.3k
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Comment: Comment: STAR split reads into two strands
3.3 years ago by swbarnes2 14k
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3.3k
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Comment: Comment: STAR split reads into two strands
3.3 years ago by swbarnes2 14k
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Answer: Answer: fastq file format
3.3 years ago by swbarnes2 14k
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3.3k
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Comment: Comment: STAR split reads into two strands
3.3 years ago by swbarnes2 14k
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Comment: Comment: Error in DESeqDataSetFromMatrix Function in DESeq Library
3.3 years ago by swbarnes2 14k
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2.5k
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Answer: Answer: How do we process Kallisto output (continuous real values) for DESEQ2 analysis (
3.3 years ago by swbarnes2 14k
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Answer: Answer: Change STAR Parameters in rsem-calculate-expression
3.3 years ago by swbarnes2 14k
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Answer: Answer: featureCounts parameters for RNA-Seq
3.3 years ago by swbarnes2 14k
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Comment: Comment: Combine haploid fastq's into diploid "individuals"
3.3 years ago by swbarnes2 14k
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Answer: Answer: How to download this genome?
3.3 years ago by swbarnes2 14k
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Answer: Answer: Same strand, same QNAME different FLAG?
3.3 years ago by swbarnes2 14k
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1.9k
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Comment: Comment: ERROR [mem_sam_pe] paired reads have different names -- during binning in metaW
3.3 years ago by swbarnes2 14k
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772
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Answer: Answer: Rows of read count files
3.4 years ago by swbarnes2 14k
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1.4k
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Answer: Answer: Strand specific library
3.4 years ago by swbarnes2 14k
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Answer: Answer: DESeq2 results difference using contrast and single conditions
3.4 years ago by swbarnes2 14k
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1.5k
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Answer: Answer: Can someone suggest any python script or any script so that I can make modificat
3.4 years ago by swbarnes2 14k
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Comment: Comment: Featurecount mapping is less
3.4 years ago by swbarnes2 14k
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Answer: Answer: Are there risks to use a GRCh38 gtf and a hg19 fa in alignment?
3.4 years ago by swbarnes2 14k
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Comment: Comment: BWA error: [bwa_idx_build] fail to open file 'ref.fa' : No such file or director
3.4 years ago by swbarnes2 14k
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1.7k
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Answer: Answer: Abnormal fastq lines
3.4 years ago by swbarnes2 14k
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2
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Comment: Comment: Differential expression design considerations
3.4 years ago by swbarnes2 14k
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Comment: Comment: RNA sequence analyzing data using R after DESeq2 (illumina)
3.4 years ago by swbarnes2 14k
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Comment: Comment: How to input data for DESeq2 from individual HTSeq count?
3.4 years ago by swbarnes2 14k
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Comment: Comment: The exon numbers of each transcript,
3.4 years ago by swbarnes2 14k
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13k
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Comment: Comment: How to input data for DESeq2 from individual HTSeq count?
3.4 years ago by swbarnes2 14k
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Comment: Comment: Extremely high adapter content and low alignment rate in RNAseq
3.4 years ago by swbarnes2 14k
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1.4k
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Answer: Answer: Extremely high adapter content and low alignment rate in RNAseq
3.4 years ago by swbarnes2 14k
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Comment: Comment: Use bioinformatics tool in iphone 7
3.4 years ago by swbarnes2 14k
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2.0k
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Comment: Comment: RNA sequence analyzing data using R after DESeq2 (illumina)
3.4 years ago by swbarnes2 14k
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Comment: Comment: biomaRt: Timeout on getBM().
3.4 years ago by swbarnes2 14k
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Comment: Comment: STAR errors out during alignment
3.4 years ago by swbarnes2 14k
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1.5k
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Comment: Comment: Is it possible to remove overrepresented sequence from trimgalore?
3.4 years ago by swbarnes2 14k
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Comment: Comment: Create matrix from ReadsPerGene.out.tab files
3.4 years ago by swbarnes2 14k
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Answer: Answer: Searching a venn diagram online tool
3.4 years ago by swbarnes2 14k
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Comment: Comment: Issue with htseq-count in Ubuntu
3.4 years ago by swbarnes2 14k
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1.6k
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Comment: Comment: Issue with htseq-count in Ubuntu
3.4 years ago by swbarnes2 14k
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636
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Comment: Comment: Degenerate Primer Sequence Recovery
3.4 years ago by swbarnes2 14k
2,066 results • Page 13 of 42
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