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Are there any GNU parallel or similar Shell/Bash code examples on how to run Snap and BWA aligners on a batch of paired .fastq files?
gnu
parallel
shell
snap
bwa
updated 6.6 years ago by
ATpoint
85k • written 6.6 years ago by
england_bioinformatics_team
▴ 20
2
votes
3
replies
2.1k
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Are there any working GNU parallel or similar Shell code examples on how to run Pilon, Prokka, VT and Snpeff tools on a batch of input files?
gnu
shell
parallel
prokka
snpeff
updated 6.6 years ago by
Joe
21k • written 6.6 years ago by
england_bioinformatics_team
▴ 20
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