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Queries regarding SARS-CoV2 GISAID Genomes Submission
wf-artic COVID GISAID
2.1 years ago by rohitsatyam102 ▴ 920
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Comment: Comment: how to pass trimmed fastP output to bwa in Nextflow
2.2 years ago by rohitsatyam102 ▴ 920
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2.1k
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Comment: Comment: how to pass trimmed fastP output to bwa in Nextflow
2.2 years ago by rohitsatyam102 ▴ 920
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5
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2.1k
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how to pass trimmed fastP output to bwa in Nextflow
fastp bwa nextflow
2.2 years ago by rohitsatyam102 ▴ 920
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1
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2.1k
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Comment: Comment: how to pass trimmed fastP output to bwa in Nextflow
2.2 years ago by rohitsatyam102 ▴ 920
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2.7k
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Comment: Comment: bcl2fastq dumps most of the reads as undetermined
2.2 years ago by rohitsatyam102 ▴ 920
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2.7k
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Comment: Comment: bcl2fastq dumps most of the reads as undetermined
2.2 years ago by rohitsatyam102 ▴ 920
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4
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1.7k
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convert a list of plotly plots to an HTML output
ggplot2 bam plotly coverage
updated 2.2 years ago by 14k • written 2.2 years ago by ▴ 920
5
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4
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2.7k
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bcl2fastq dumps most of the reads as undetermined
bcl2fastq
2.2 years ago by rohitsatyam102 ▴ 920
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1
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1.7k
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Comment: Comment: convert a list of plotly plots to an HTML output
2.2 years ago by rohitsatyam102 ▴ 920
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4.1k
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Comment: Comment: reduce space between X-axis ticks
2.2 years ago by rohitsatyam102 ▴ 920
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6
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4.1k
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reduce space between X-axis ticks
R GSEA
2.2 years ago by rohitsatyam102 ▴ 920
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4.1k
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Comment: Comment: reduce space between X-axis ticks
2.2 years ago by rohitsatyam102 ▴ 920
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1
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4.1k
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Comment: Comment: reduce space between X-axis ticks
2.2 years ago by rohitsatyam102 ▴ 920
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0
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1.2k
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Tutorial: Making LDA Score plot
LDA metagenomics
2.3 years ago by rohitsatyam102 ▴ 920
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1
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20k
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Comment: Comment: RNA-Seq analysis using STAR and Salmon
2.3 years ago by rohitsatyam102 ▴ 920
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462
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Make parts of process run once and other parts as loop
nextflow sars nextclade covid
2.3 years ago by rohitsatyam102 ▴ 920
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1.2k
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Comment: Comment: Nextflow printing help message even when params.help is false
2.4 years ago by rohitsatyam102 ▴ 920
6
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2
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1.2k
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Nextflow printing help message even when params.help is false
nextflow align bwa alignment
2.4 years ago by rohitsatyam102 ▴ 920
0
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6
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1.7k
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Nextflow runs Successfully but output files are empty. How to debug?
nextflow bcftools
2.4 years ago by rohitsatyam102 ▴ 920
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1.7k
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Answer: Answer: Nextflow runs Successfully but output files are empty. How to debug?
2.4 years ago by rohitsatyam102 ▴ 920
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0
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1.7k
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Comment: Comment: Nextflow runs Successfully but output files are empty. How to debug?
2.4 years ago by rohitsatyam102 ▴ 920
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1
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1.7k
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Comment: Comment: Nextflow runs Successfully but output files are empty. How to debug?
2.4 years ago by rohitsatyam102 ▴ 920
1
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1
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2.8k
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Comment: Comment: Fastqc in nextflow run only one pair of fastq.gz file and not on all Fastq files
2.4 years ago by rohitsatyam102 ▴ 920
3
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3
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2.8k
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Fastqc in nextflow run only one pair of fastq.gz file and not on all Fastq files
nextflow fastqc
updated 2.4 years ago by 86k • written 2.4 years ago by ▴ 920
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Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
2.4 years ago by rohitsatyam102 ▴ 920
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2.6k
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Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
2.4 years ago by rohitsatyam102 ▴ 920
3
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5
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2.6k
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Using shell command in Nextflow DSL=2 for BWA mem aligner
nextflow alihnment align bwa
2.4 years ago by rohitsatyam102 ▴ 920
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1
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2.6k
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Comment: Comment: Using shell command in Nextflow DSL=2 for BWA mem aligner
2.4 years ago by rohitsatyam102 ▴ 920
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1
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1.1k
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Comment: Comment: Online training - Introduction to Nextflow
2.4 years ago by rohitsatyam102 ▴ 920
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4.3k
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Comment: Comment: Tutorial for analysing gpr files of microarray
2.5 years ago by rohitsatyam102 ▴ 920
3
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1
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715
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GO Term Analysis in scRNASeq data with low number of genes expressed
scrnaseq Seurat
updated 2.5 years ago by ★ 1.9k • written 2.5 years ago by ▴ 920
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3.3k
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Comment: Comment: Big difference in estimated duplicate reads between forward and reverse of paire
2.5 years ago by rohitsatyam102 ▴ 920
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1
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3.3k
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Comment: Comment: Big difference in estimated duplicate reads between forward and reverse of paire
2.5 years ago by rohitsatyam102 ▴ 920
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0
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2.1k
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Comment: Comment: How to use SingleR for annotating single-cell transcriptomics dataset with our o
2.7 years ago by rohitsatyam102 ▴ 920
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1
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3.1k
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Comment: Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
2.7 years ago by rohitsatyam102 ▴ 920
5
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0
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3.3k
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Forum: Correct method of Merging/Integrating multiple single cell dataset using Seurat
seurat scrnaseq
2.8 years ago by rohitsatyam102 ▴ 920
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0
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8.8k
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Comment: Comment: SCTransform prior or after merging samples into one object?
2.8 years ago by rohitsatyam102 ▴ 920
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1
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14k
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Comment: Comment: FindAllMarkers pct1 and pct2
2.8 years ago by rohitsatyam102 ▴ 920
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1
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14k
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Comment: Comment: FindAllMarkers pct1 and pct2
2.8 years ago by rohitsatyam102 ▴ 920
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3.5k
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Comment: Comment: Running fastq_screen on your data
2.8 years ago by rohitsatyam102 ▴ 920
4
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2
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3.5k
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Tutorial: Running fastq_screen on your data
fastqscreen
2.8 years ago by rohitsatyam102 ▴ 920
1
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0
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1.0k
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Interpreting the Jackstraw plot of Seurat
genomics seurat plot scrnaseq
2.8 years ago by rohitsatyam102 ▴ 920
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1
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3.1k
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Comment: Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
2.8 years ago by rohitsatyam102 ▴ 920
5
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5
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3.1k
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How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
scrnaseq Seurat
updated 5 months ago by • 0 • written 2.8 years ago by ▴ 920
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0
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2.5k
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Comment: Comment: Mitochondrial percentage in Seurat
2.8 years ago by rohitsatyam102 ▴ 920
3
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1
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1.2k
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Forum: How to download multiple .gz files from Ensembl Protists database
wget protist ensembl
updated 10 months ago by ★ 2.1k • written 2.8 years ago by ▴ 920
0
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0
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578
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How to update gff/gtf files after using Mauve Config Mover
assembly genome Mauve
2.8 years ago by rohitsatyam102 ▴ 920
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0
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9.7k
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Comment: Comment: Mauve Contig Mover
3.2 years ago by rohitsatyam102 ▴ 920
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1
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1.5k
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Comment: Comment: Quick questions about Alevin and AlevinQC
3.3 years ago by rohitsatyam102 ▴ 920
231 results • Page 2 of 5
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